Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1589 277 2e-69 >seq1589 Length=144912 Score = 277 bits (306), Expect = 2e-69 Identities = 614/916 (67%), Gaps = 4/916 (0%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| ||||| || ||||||| || ||||| || | ||| | ||| Sbjct 46535 AACTACCAATACTTTGGATTCAAGACGCTGGAGAGATCATACCTTCTGAGGATCAACGGC 46594 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| ||||| |||| || ||| || | ||||| || || | || || ||||| | Sbjct 46595 AAGGTTGCCGAGAGACCACAACAGATGATCATGCGTGTTGCTGTTGGCATCCACGGTGAT 46654 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 ||||| | || | | | | || ||||| | ||||| | || |||| | Sbjct 46655 GACATTGAGTCTGCCATTGAGACCTACAACTACATGTCGAACAAGTACTTCACACATG-C 46713 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | || || ||||||| ||| || || || | ||| || | || || ||||| || Sbjct 46714 TTCGCCTACGCTGTTCAGCGCCGGAACACCCAACGCTCAGCTGGCATCCTGCTTCCTCAT 46773 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | |||| ||| ||| || || | ||||| | | ||| ||| || | | Sbjct 46774 CGAC-ATGAAGGATGACAGCATTGATGGCATCTACGACACCTTGAAGACCTGCGCCATGA 46832 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| || |||| || || ||||| ||| || ||| | | || || | || | | Sbjct 46833 TCTCCAAGAACGCTGGCGGCATCGGACTCAACGTTCACCGCATCCGCGCGACTGGAGCAT 46892 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 ||||| ||||||| || || || |||||||| ||||| || ||||| || || || |||| Sbjct 46893 ACATCAGCGGTACAAACGGAACATCCAACGGTCTCGTACCCATGCTGCGTGTGTTTAACA 46952 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || |||||||| |||||||| || | | | ||| ||||||| | || Sbjct 46953 ACACCGCTCGCTACGTCGACCAGGGCGGCAACAAGCGACCTGGTGCTTTCGCCATGTACA 47012 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 ||||||| |||||||| || || | ||| | || || || ||||||||||| || | Sbjct 47013 TCGAGCCATGGCACGCAGATGTCTTCTCCTTCTTGGATCTCCGCAAGAACCACGGAAAGG 47072 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | || | ||| | || | ||||||| |||||||||||| || || || ||||| | Sbjct 47073 AGGAGGTTCGTGCCCGCGATTTGTTCTACGGTCTCTGGGTGCCTGATCTGTTCATGAAGC 47132 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | || ||| | ||| || | |||| | | | || || | || || ||||| ||| | | Sbjct 47133 GTGTTGAGCAGAACACCACTTGGACTTTGATGTGCCCTCACGAGTGCCCCGGTCTGGCTG 47192 Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432 | || | || | || || || |||| | || ||||| ||||||||| Sbjct 47193 ATGTCTACGGCGCTGAGTTCGAGGAGCTGTACGAGCGATACGAGCGTGAGGGCAAGGGTC 47252 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | || | ||| |||||| ||| | ||| | || | ||| ||||| | Sbjct 47253 GTGAGACAGTCCGCGCTCAGAAGCTCTGGTACGCCATCCTCGAGGCTCAGACCGAGACCG 47312 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 | ||||| |||||| | | ||||||| ||| ||||| |||| ||||||| || || | | Sbjct 47313 GCACGCCATACATCCTCTACAAGGACGCTGCCAACGGCAAGAGCAACCAGAAGAACTTGG 47372 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 || ||| ||||| || || ||||||||||| ||||||| ||| |||| || ||| Sbjct 47373 GGACCATCCGCAGCTCCAACCTCTGCACCGAGATCATCGAGTACACTGCTCCTGATGAGG 47432 Query 94613 TTGCTGTGTGTAACCT 94628 | || ||||| ||||| Sbjct 47433 TCGCCGTGTGCAACCT 47448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494700486021080