Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 197 2e-45
seq1589 118 1e-21
>seq1655
Length=66175
Score = 197 bits (218), Expect = 2e-45
Identities = 546/821 (67%), Gaps = 31/821 (4%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| ||||| ||||||||||||||||| || || || ||||| ||| ||||||||
Sbjct 52168 GTAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTGCCTCCGAGGGAGATGTTCTCCAT 52109
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGT-TGGCACCCCAAT--CTGTTTGAGGAG 127347
||| || || ||||| | | ||| | | ||| || | | | | ||||||
Sbjct 52108 AAAGTCGAAGGGGTTTGTGGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAG---GAGGAG 52052
Query 127348 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTT 127407
||| || | |||| |||| ||||||| |||| || | |||||| |||| |||
Sbjct 52051 ACGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCGC 51992
Query 127408 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGC 127467
||||||||| ||||| || ||| ||| ||| ||| | || || || | |||| |
Sbjct 51991 ACATGGGAGGGCGTCTGTGAGAAACTCCTGCTCGATGACAACGGCCTCGGTGATGATGTC 51932
Query 127468 GTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTC----TTGAAGAGTTCCA--CAG- 127520
| || || || | | || || | || | | ||| || |||
Sbjct 51931 TTCAA-------CAACCTGGTTTGATGGCTTGTTGTTGAGGTGGGAGAACAGCAGGCAGG 51879
Query 127521 CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 127580
| || || ||| | |||||||||||||||||||| || || |||||| || || |
Sbjct 51878 CGAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGG 51819
Query 127581 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 127640
|||||||||| ||||||||||||||||| || | ||||| || ||||||||||| |
Sbjct 51818 GCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCGGAGAAGAAGATGC 51759
Query 127641 CCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AAC 127699
|||| | || || || | ||||| |||||||| || | |||| | | |
Sbjct 51758 CCTCGATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGG-TCGAGTTCTTGTCGGAGATC 51700
Query 127700 CACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAG 127759
|| || |||||| | ||||| || ||| ||||||| | | | ||| || | |||
Sbjct 51699 CATCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAG 51640
Query 127760 A-GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 127818
| || | | | || || || || ||||||| |||| ||||| || ||||| ||
Sbjct 51639 AGGTACGTGCGTTGCT-TGGGCTCGCTGATGTATGTATCGATGAGGAGGGAGTATGTCTC 51581
Query 127819 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 127877
| ||||| | | ||| ||| || || ||||||| |||| || ||| ||||
Sbjct 51580 GGAGTGGATGTTCTCCATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCCTCGGGGATCT 51522
Query 127878 GTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 127936
| ||||| || | || | | | ||| |||||| || ||||||||||| ||||
Sbjct 51521 GCACCTC-TCCACTGAAGCGCTCAATGAGGTTCTCATTGACGATTCCATCGGAGGCAGCG 51463
Query 127937 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG---GTCTTCCAG 127993
|| || ||||||| | ||||| | || | ||||| ||| | ||||||
Sbjct 51462 AAGAAGGCCAGGACGTGAGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCCAG 51403
Query 127994 TCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
|||| |||||||| || ||||| | |||||| || |||||
Sbjct 51402 TCGTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCA 51362
>seq1589
Length=144912
Score = 118 bits (130), Expect = 1e-21
Identities = 468/720 (65%), Gaps = 20/720 (3%)
Strand=Plus/Minus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
||||||||| | ||||||||||| |||||||| ||| ||||| ||| || | |||||
Sbjct 47988 TAGATGTTGCTGGTGTATGGCTCGAAGCACTCGTTGAAACCCATGATCTGCGAGGTGGAT 47929
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| || |||||||| || | ||| || |||||| | ||| | | || ||
Sbjct 47928 GCAGTCGGCATGGGAGCGACGAGGAGCGAGTTGCGAACACCGTGCTCGGCGATCTTGGCC 47869
Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC--TCCCCCTCCCACATATCAAACTGGA 116080
||||| ||| ||||||| || || | || || | | ||||||| || |||| |
Sbjct 47868 TTGAGTGCGGCCCAGTCCCAGA-GATCAGTGGGAGTCACAC-CCCACATGTCGTACTGAA 47811
Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCT---CCG 116137
| || | ||| | || || ||||| ||||||| ||||| || || || | |
Sbjct 47810 GCTCGCCCTTGGAAACGGGAGAGCCCTCGTATGTCTCGTATGGTCC---AAGCTTAGCAG 47754
Query 116138 CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA 116197
| | ||| | || ||| || |||||||| || ||||| || || || || |
Sbjct 47753 CGAGATCGCATGAAGCGGTGAGAGCAGCGTGATAGATGGTCTCGAAGATCTGAATGTTGA 47694
Query 116198 T-TGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA--AATAAATACATCCGCGA 116254
|| | | |||| || || || | | || || | || ||| |||| || |
Sbjct 47693 GCTGGCGAG-CCTCAGGAGAGTCGAAAGGCATGCG-CAGAGCCAAGAAAG-CATCGGCAA 47637
Query 116255 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC-C 116313
|||| | ||||||||| || || || || || | | || ||| ||||| ||| |
Sbjct 47636 GACCGTTGACACCGAGACCGATGGGACGGTGACGGAAGTTGCTCTTGCGAGCC-TCTGGC 47578
Query 116314 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 116373
|| || || || ||||| | | | || | || |||||||| | ||||
Sbjct 47577 ACTGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTGGTGACGGTTTGAGTGACC 47518
Query 116374 TCATGAAGCTTTTCGTAATCAAAACTGCGAGT-CTCTTCATTGACATACTTAGGAAGGGC 116432
| || ||||| || | || |||| || || ||| | ||| || | || |||||
Sbjct 47517 TGGTGGAGCTTGTCAAAGTCGAAAC-GCTCGTTCTCAATGTCGACGTAGGTGGGGAGGGC 47459
Query 116433 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 116492
|| || || || || ||||| | | |||||| | |||||||||| || || || ||
Sbjct 47458 GAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCGGT 47399
Query 116493 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 116552
|| | || || || ||||| ||||||||||| || || ||| ||| ||
Sbjct 47398 GCAGAGGTTGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTGCCGTTGGCAGC 47339
Query 116553 ATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612
||||||||||| || |||||||| || ||||| || || | || ||| || || | |||
Sbjct 47338 GTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCGTACCA 47279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613479032350680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |