Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 156 7e-33
seq1589 105 1e-17
>seq1655
Length=66175
Score = 156 bits (172), Expect = 7e-33
Identities = 538/833 (65%), Gaps = 7/833 (1%)
Strand=Plus/Minus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||| ||||| | | ||| || ||||| || |||| |||||
Sbjct 52153 CTTCTCGAAGAAGTTGGTTTTGCCTCCGAGGGAGATGTTCTCCATAAAGTCGAAGGGGTT 52094
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
| ||| ||| ||||| | ||||| ||| || | | ||| || || || ||
Sbjct 52093 TGTGGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAGGAGGAGACGGTCGGCGACGAACTC 52034
Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828
|||||| ||||| ||| ||| || || || ||| | ||||| || || |
Sbjct 52033 GATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCGCACATGGGAGGGCGTCTGT 51974
Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCC 159888
|||||||||| ||| || | || || ||||| | || | ||| | ||
Sbjct 51973 GAGAAACTCCTGCTCGATGACAACGGCCTCGGTGATGATGTCTTCAACAACCTGGTTTGA 51914
Query 159889 CGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTC 159948
|||||| | |||| ||||| ||||| || |||||| ||||| |||||
Sbjct 51913 TGGCTTGTTGTTGAGGTGGGAG---AACAGCAGGCAGGCGAAGTCGGTGTGCATGCCCTC 51857
Query 159949 GTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAG 160008
||| || ||||||| ||||||||| | | ||||||| ||||||| |||||| || |
Sbjct 51856 GTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCACGCTTCTTCAA 51797
Query 160009 CCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCAC 160068
||| || |||| ||| || | ||| || ||||| ||||| | ||| ||||| || |
Sbjct 51796 CCAGAAGATGGACGCGAATGATCCGGAGAAGAAGATGCCCTCGATGGCGGCAAAGGCGAT 51737
Query 160069 GAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTT 160128
||| | |||| | | ||| |||| | |||| | ||||| ||||||||
Sbjct 51736 GAGACGGCAGGCAAAGGTCGAGTTCTTGTCGGAGATCCATCGCAGCGCCCAGTCAGCCTT 51677
Query 160129 CTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACA-ATCTGTCCTGCTCCTTCACAT 160187
||| |||||| || ||| |||| |||||| || | | || | | | ||| |
Sbjct 51676 CTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAGAGGTACGTGC-GTTGCTTGGGCT 51618
Query 160188 CCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCCA 160247
| |||| ||| | || || ||||| | || | ||| | || || || |
Sbjct 51617 CGCTGATGTATGTATCGATGAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGA 51558
Query 160248 TCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCTTTGAC 160307
| || || |||||| | ||||| | ||||||||| |||| | | |
Sbjct 51557 TTTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGCACCTCTCCACTGAAGCGCTCAA 51498
Query 160308 CCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGA 160367
|| || |||| || | || |||| ||| || ||||| |||| |||||||||||||
Sbjct 51497 TGAGGTTCTCATTGACGATTCCATCGGAGGCAGCGAAGAAGGCCAGGACGTGAGAGATGA 51438
Query 160368 AATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGGCCAAATCA 160426
| | |||||| | |||||| | ||| | ||||| ||| | || | || || |||
Sbjct 51437 AGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCCAGTCGTG-AAGATCCTTGGACAGATCG 51379
Query 160427 ACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGAT 160479
| ||| || ||| |||| | |||| || | |||||||| ||||||
Sbjct 51378 ATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAGAT 51326
>seq1589
Length=144912
Score = 105 bits (116), Expect = 1e-17
Identities = 238/354 (67%), Gaps = 8/354 (2%)
Strand=Plus/Minus
Query 204185 GGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAAT 204244
||||||| | ||| || || || | ||||| | |||| | | | |||| ||||| ||
Sbjct 48030 GGGTTGACAACCTGGAACTCGCCAGCGAGCACACGACGGGAGTAGATGTTGCTGGTGTAT 47971
Query 204245 GGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCC 204304
|| ||||| ||||||| || | ||||| | |||| || || |||||||||||
Sbjct 47970 GGCTCGAAGCACTCGTTGAAACCCATGATCTGCGAGGTGGATGCAGTCGGCATGGGAGCG 47911
Query 204305 AGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCG 204364
| ||| || |||||||| ||||||| | || | || ||| || | || ||||||
Sbjct 47910 ACGAGGAGCGAGTTGCGAACACCGTGCTCGGCGATCTTGGCCTTGAGTGCGGCCCAGTCC 47851
Query 204365 TGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGG 204424
| || |||| |||| |||||||||||| |||||| ||| | || ||
Sbjct 47850 CAGAGATCAGTGGGAGTCACACCCCACATGTCGTACTGAAGCTCGCCCTTGGAAACGGGA 47791
Query 204425 CTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCA-- 204482
||||| ||| ||| || || | || | || || | ||| || |||| |
Sbjct 47790 GAGCCCTCGTATGTCTCGTATGGTCCAAGCTTAGCAGCGAGATCGCATGAAGCGGTGAGA 47731
Query 204483 -TGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCG-GCCTC 204534
||||||||| |||||||| |||||||||| | || | |||||| |||||
Sbjct 47730 GCAGCGTGATAG---ATGGTCTCGAAGATCTGAATG-TTGAGCTGGCGAGCCTC 47681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795118692436880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |