Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1655 156 7e-33 seq1589 105 1e-17 >seq1655 Length=66175 Score = 156 bits (172), Expect = 7e-33 Identities = 538/833 (65%), Gaps = 7/833 (1%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||| ||||| | | ||| || ||||| || |||| ||||| Sbjct 52153 CTTCTCGAAGAAGTTGGTTTTGCCTCCGAGGGAGATGTTCTCCATAAAGTCGAAGGGGTT 52094 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | ||| ||| ||||| | ||||| ||| || | | ||| || || || || Sbjct 52093 TGTGGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAGGAGGAGACGGTCGGCGACGAACTC 52034 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 |||||| ||||| ||| ||| || || || ||| | ||||| || || | Sbjct 52033 GATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCGCACATGGGAGGGCGTCTGT 51974 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCC 159888 |||||||||| ||| || | || || ||||| | || | ||| | || Sbjct 51973 GAGAAACTCCTGCTCGATGACAACGGCCTCGGTGATGATGTCTTCAACAACCTGGTTTGA 51914 Query 159889 CGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTC 159948 |||||| | |||| ||||| ||||| || |||||| ||||| ||||| Sbjct 51913 TGGCTTGTTGTTGAGGTGGGAG---AACAGCAGGCAGGCGAAGTCGGTGTGCATGCCCTC 51857 Query 159949 GTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAG 160008 ||| || ||||||| ||||||||| | | ||||||| ||||||| |||||| || | Sbjct 51856 GTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCACGCTTCTTCAA 51797 Query 160009 CCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCAC 160068 ||| || |||| ||| || | ||| || ||||| ||||| | ||| ||||| || | Sbjct 51796 CCAGAAGATGGACGCGAATGATCCGGAGAAGAAGATGCCCTCGATGGCGGCAAAGGCGAT 51737 Query 160069 GAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTT 160128 ||| | |||| | | ||| |||| | |||| | ||||| |||||||| Sbjct 51736 GAGACGGCAGGCAAAGGTCGAGTTCTTGTCGGAGATCCATCGCAGCGCCCAGTCAGCCTT 51677 Query 160129 CTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACA-ATCTGTCCTGCTCCTTCACAT 160187 ||| |||||| || ||| |||| |||||| || | | || | | | ||| | Sbjct 51676 CTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAGAGGTACGTGC-GTTGCTTGGGCT 51618 Query 160188 CCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCCA 160247 | |||| ||| | || || ||||| | || | ||| | || || || | Sbjct 51617 CGCTGATGTATGTATCGATGAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGA 51558 Query 160248 TCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCTTTGAC 160307 | || || |||||| | ||||| | ||||||||| |||| | | | Sbjct 51557 TTTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGCACCTCTCCACTGAAGCGCTCAA 51498 Query 160308 CCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGA 160367 || || |||| || | || |||| ||| || ||||| |||| ||||||||||||| Sbjct 51497 TGAGGTTCTCATTGACGATTCCATCGGAGGCAGCGAAGAAGGCCAGGACGTGAGAGATGA 51438 Query 160368 AATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGGCCAAATCA 160426 | | |||||| | |||||| | ||| | ||||| ||| | || | || || ||| Sbjct 51437 AGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCCAGTCGTG-AAGATCCTTGGACAGATCG 51379 Query 160427 ACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGAT 160479 | ||| || ||| |||| | |||| || | |||||||| |||||| Sbjct 51378 ATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAGAT 51326 >seq1589 Length=144912 Score = 105 bits (116), Expect = 1e-17 Identities = 238/354 (67%), Gaps = 8/354 (2%) Strand=Plus/Minus Query 204185 GGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAAT 204244 ||||||| | ||| || || || | ||||| | |||| | | | |||| ||||| || Sbjct 48030 GGGTTGACAACCTGGAACTCGCCAGCGAGCACACGACGGGAGTAGATGTTGCTGGTGTAT 47971 Query 204245 GGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCC 204304 || ||||| ||||||| || | ||||| | |||| || || ||||||||||| Sbjct 47970 GGCTCGAAGCACTCGTTGAAACCCATGATCTGCGAGGTGGATGCAGTCGGCATGGGAGCG 47911 Query 204305 AGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCG 204364 | ||| || |||||||| ||||||| | || | || ||| || | || |||||| Sbjct 47910 ACGAGGAGCGAGTTGCGAACACCGTGCTCGGCGATCTTGGCCTTGAGTGCGGCCCAGTCC 47851 Query 204365 TGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGG 204424 | || |||| |||| |||||||||||| |||||| ||| | || || Sbjct 47850 CAGAGATCAGTGGGAGTCACACCCCACATGTCGTACTGAAGCTCGCCCTTGGAAACGGGA 47791 Query 204425 CTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCA-- 204482 ||||| ||| ||| || || | || | || || | ||| || |||| | Sbjct 47790 GAGCCCTCGTATGTCTCGTATGGTCCAAGCTTAGCAGCGAGATCGCATGAAGCGGTGAGA 47731 Query 204483 -TGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCG-GCCTC 204534 ||||||||| |||||||| |||||||||| | || | |||||| ||||| Sbjct 47730 GCAGCGTGATAG---ATGGTCTCGAAGATCTGAATG-TTGAGCTGGCGAGCCTC 47681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795118692436880