Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq3230 138 1e-27
seq2320 93.3 5e-14
>seq3230
Length=199858
Score = 138 bits (152), Expect = 1e-27
Identities = 145/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| ||||||||||| || ||||| |||| ||||| ||||||||||||||
Sbjct 170519 TCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAG 170460
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
||||| ||||| ||||| | || | || |||||||||| ||||||| ||| | |
Sbjct 170459 ATCAATCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTAACATTG 170400
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||| ||| ||||| |||| ||||| || ||||| || || || || ||
Sbjct 170399 TCGATGGTGTCCGACGACTCCACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCTTGACG 170340
Query 46583 AAGATTTGCAT 46593
||||| |||||
Sbjct 170339 AAGATCTGCAT 170329
Score = 113 bits (124), Expect = 5e-20
Identities = 167/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420
|||| ||||| | | ||| | ||||| |||| || |||||||| || || |||||
Sbjct 170789 TATTGTCCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAA 170730
Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480
|| || || || || |||| || ||||||||||||||||| || | |||||| || ||
Sbjct 170729 TCAGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCC 170670
Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGA 46539
| || | | |||||||| ||||| ||||| ||| | | | |||||| ||
Sbjct 170669 GGTGGGATTCCTTCCTTGTCTTGAATCTTGGACTTGA-CGTTGTCGATCGTGTCTGATGA 170611
Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || |||| ||||| || ||||| || || || || || || ||||||||
Sbjct 170610 TTCAACTTCCAGTGTGATCGTCTTGCCGGTGAGTGTCTTGACGAATATTTGCAT 170557
Score = 91.5 bits (100), Expect = 2e-13
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||| || |||||| | || || |||||||| ||||||||
Sbjct 170292 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGCCCATCCTCAAGCTGCTTTCCGGCGAA 170233
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | |||||||||||| | || | || ||||||||| ||||| |||| | |
Sbjct 170232 GATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGAATCTTGCTCTTCACATT 170173
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571
| | || || || || || || | ||||||||| || || ||||
Sbjct 170172 GTCGATGGTATCCGAGGACTCGACCTCAAGCGTGATGGTCTTTCCAGTCA 170123
>seq2320
Length=314285
Score = 93.3 bits (102), Expect = 5e-14
Identities = 80/99 (81%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || ||||| | || ||||| ||||||||||||||
Sbjct 232694 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAA 232753
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|||| |||||| ||||| | || | || ||||||||
Sbjct 232754 GATCAGGCGCTGTTGGTCCGGTGGGATGCCTTCCTTGTC 232792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565212448491960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |