Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2722 275 8e-69 seq2876 98.7 1e-15 seq795 98.7 1e-15 seq2415 86.0 8e-12 >seq2722 Length=207625 Score = 275 bits (304), Expect = 8e-69 Identities = 485/704 (69%), Gaps = 12/704 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || ||||||||||| ||||| || || || | ||||| || ||||| || Sbjct 120861 TCGAAGTCCTCGCCACCCAAGTGGGTATCTCCAGCAGTGGACTTGACCTCGAAGATGCCC 120802 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | ||||||||||| ||||||||||||| ||| || ||||| ||| Sbjct 120801 TCCTCGATGGTAAGAAGAGAAACATCAAAGGTACCACCACCCAAGTCGAAGATGAGCACG 120742 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || | ||||| ||||||||||| || || || || || || || || Sbjct 120741 TTGCGCTCGCCCTCGGTCTTCTTGTCGAGACCGTAGGCAATTGCAGCGGCGGTAGGCTCG 120682 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || || || ||||||||| || || | ||||| || |||||||| || Sbjct 120681 TTGATGATGCGCAGGACGTTCAGGCCGGCGATGAGACCAGCATCCTTGGTCGCTTGGCGC 120622 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| ||||| || ||||| || ||||| || | ||||| | ||| || Sbjct 120621 TGAGAGTCGTTGAAGTATGCTGGGACAGTGACGACAGCATTGTTGACTGTGCCACCAAGG 120562 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | ||||| | || ||| ||||| || ||||| ||||| ||||| || | | Sbjct 120561 TATGCCTCCGCAGTCTCGCGCATCTTGGTGAGGACCATTGATGAGATCTCCTCTGGTGTG 120502 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---G 7873 ||||| ||| || || || || || |||| | || || || || |||| | Sbjct 120501 AACTGCTTCTCCTCGCCCTTGAACTCGACTTGTACCACCGGCTT----GC--CACCCTTG 120448 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 ||| ||||| | | ||| ||||| ||| | || |||| || ||||| Sbjct 120447 TTGATGACCTTGAAGGGGAAATGCTTCATGTCGGCCTGCACCTCAGCATCGTCGAACTTC 120388 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | ||||| || ||||| || || || |||||||| ||||||||||| ||| ||| Sbjct 120387 CGGCCGATCAGGCGCTTGGCGTCGAAGACTGTGTTGACTGGGTTCATGGCGACTTGATTC 120328 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || | ||| ||||| || || || | || || || |||||| |||| || || Sbjct 120327 TTTGCGGAGTCACCGATGAGGCGCTC---GGTGTCGGTGAAGGCGACGAACGAGGGTGTT 120271 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 || || || || |||||||| || || || || | |||||| | | ||| ||| || Sbjct 120270 GTGCGGTTACCCTGGTCGTTGGCGATGATCTCAATGCGGTCATCTCTGTAGATGCCCACA 120211 Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157 || || || || || || || || |||||||||||| | | ||| Sbjct 120210 CATGAGTAGGTCGTACCCAAGTCGATACCGATTGCTGGTGCCAT 120167 Score = 174 bits (192), Expect = 2e-38 Identities = 261/371 (70%), Gaps = 0/371 (0%) Strand=Plus/Minus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 |||||||| ||||| | || ||||| || || ||||| |||||||| || | ||| Sbjct 121351 ATGGCGGCCTGGACGGCGGCACCGTAGGCAACGGCCTCGTCGGGGTTGATAGAGCGATTG 121292 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || || ||||| || | || || | ||| | || | || || || || || ||| Sbjct 121291 GGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGACCTTGGGAATACGGGTGGAT 121232 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 ||||||||||| ||||| || | || || || |||||||| | ||| || || || Sbjct 121231 CCACCGACCAAGACGATCTCGTGGACGGAAGACTTGTCGATCTTGGCGTCGCGCAGAGTG 121172 Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 ||||| || ||||| ||||| | |||| ||||| ||||| || || ||| Sbjct 121171 CGCTCGACGGGCTCCATGGTGGAGCGGAAGAGGTCCTGGCACAGCTCCTCGAAGCGGGCA 121112 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 ||||| ||||| || ||||| || || || ||||| | ||| || || || |||| || Sbjct 121111 CGGGTGATGGAGGTGTAGAAGTCGACACCCTCGTAGAGCGAGTCGATCTCGATGGAGGTC 121052 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 ||||| | ||||| | |||||||| |||||||| || || || || | ||| || ||| Sbjct 121051 TGTGCGGAGGAAGAGAGAGTTCGCTTCGCGCGCTCGCAAGCGGTGCGCAGACGGCGGAGG 120992 Query 7382 GCACGCGGGTT 7392 || || | ||| Sbjct 120991 GCGCGGGCGTT 120981 >seq2876 Length=450610 Score = 98.7 bits (108), Expect = 1e-15 Identities = 220/327 (67%), Gaps = 5/327 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||| | || || || || ||||| | || || || |||| ||| Sbjct 268904 TCGAAGTCCTCACCACCGAGATGGGTGTCACCGGCGGTAGATTGAACCTCGAAGACACCC 268963 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA-GTAC 7575 || | | | || | || ||||| || ||||||||||| || || | | || | | Sbjct 268964 TGGTCGACGGTCAAGACGGAGACATCGAAAGTACCACCACCGAGATCGTAGACGATGATC 269023 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 ||| || | ||| | |||| ||||| ||||| || | ||| || || || || || Sbjct 269024 TGGCGT-TCCTTGTC---GGTCTTGTCGAGGCCGTAGGCCAAAGCGGCGGCGGTGGGCTC 269079 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | | || ||| ||| || ||||| || | | ||||| || || || || Sbjct 269080 GTTGACCACGCGGAGAACGTTGAGACCAGCGATCGCGCCGGCATCCTTGGTGGCGGCACG 269139 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || | ||||| |||||||| || || || ||||| |||| |||| |||| ||||| Sbjct 269140 CTGAGCGTCGTTGAAGTAGGCTGGAACAGTGACGACTGCGTTGCTGACCTTCTCTCCGAG 269199 Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782 || || || |||| || ||||| || Sbjct 269200 GTAGGACTCGGCGACCTCCTTCATCTT 269226 >seq795 Length=24247 Score = 98.7 bits (108), Expect = 1e-15 Identities = 212/315 (67%), Gaps = 3/315 (1%) Strand=Plus/Plus Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527 |||||||||||| || || || ||||| || ||||| |||| ||| || | ||||| Sbjct 3965 ACCACCCAAGTGAGTGTCACCAGCGGTAGCCTTGACAGTGAAGACACCACCCTGAATGTG 4024 Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587 | | || ||||| || || |||||||| || || | || || ||||| || | Sbjct 4025 GAGAAGGGAGACATCGAAAGTGCCACCACCAAGATCGTAGATCAGGACGTTGCGCTCCTT 4084 Query 7588 GTC--TTTGTTCTTAT-CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAAT 7644 ||| | | | || | |||||||| |||||||| || || || || || || || || Sbjct 4085 GTCAGACTTTCCGGATCCAAGACCGTAGGCGATAGCGGCAGCGGTAGGCTCGTTGATGAT 4144 Query 7645 ACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704 || ||| ||| ||||||| || | | || || || || ||||| | || || Sbjct 4145 GCGGAGAACGTTGAGGCCAGAGATGGCACCGGCGTCCTTGGTAGCTTGCCTCTGGTTGTC 4204 Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764 ||| ||||| || || || || | ||| || | | ||| ||||| || || | || Sbjct 4205 GTTGAAGTATGCGGGAACGGTGATGACGGCCTTGGAGACCTTCTTGCCAAGCTTGACCTC 4264 Query 7765 CGCGATATCTTTCAT 7779 ||||| || ||||| Sbjct 4265 AGCGATTTCCTTCAT 4279 >seq2415 Length=191159 Score = 86.0 bits (94), Expect = 8e-12 Identities = 119/162 (73%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGT 7655 ||| ||||||||||| |||| || || || || || || || || | ||| | |||| Sbjct 9513 CTTCTCGAGACCGTAAGCGAGGGCAGCAGCGGTAGGCTCGTTGATCACACGGTGAACAG- 9455 Query 7656 TCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 |||| |||| ||| ||| | ||||| || || ||||||| ||| ||||| ||||| Sbjct 9454 TCAGACCAGAAAT--TTGACCGGCATCCTTGGTTGCTTGTCTCTGCTGGTCGTTGAAGTA 9397 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| || || ||||| || |||| | ||| ||||| ||||| Sbjct 9396 GGCGGGAACAGTTACAACAGCGTTCTTGATGTTCTTTCCGAG 9355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635103639465320