Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq2722 275 8e-69
seq2876 98.7 1e-15
seq795 98.7 1e-15
seq2415 86.0 8e-12
>seq2722
Length=207625
Score = 275 bits (304), Expect = 8e-69
Identities = 485/704 (69%), Gaps = 12/704 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || || ||||||||||| ||||| || || || | ||||| || ||||| ||
Sbjct 120861 TCGAAGTCCTCGCCACCCAAGTGGGTATCTCCAGCAGTGGACTTGACCTCGAAGATGCCC 120802
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || ||| | | | ||||||||||| ||||||||||||| ||| || ||||| |||
Sbjct 120801 TCCTCGATGGTAAGAAGAGAAACATCAAAGGTACCACCACCCAAGTCGAAGATGAGCACG 120742
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || | ||||| ||||||||||| || || || || || || || ||
Sbjct 120741 TTGCGCTCGCCCTCGGTCTTCTTGTCGAGACCGTAGGCAATTGCAGCGGCGGTAGGCTCG 120682
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || || || || ||||||||| || || | ||||| || |||||||| ||
Sbjct 120681 TTGATGATGCGCAGGACGTTCAGGCCGGCGATGAGACCAGCATCCTTGGTCGCTTGGCGC 120622
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| || ||||| ||||| || ||||| || ||||| || | ||||| | ||| ||
Sbjct 120621 TGAGAGTCGTTGAAGTATGCTGGGACAGTGACGACAGCATTGTTGACTGTGCCACCAAGG 120562
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| | ||||| | || ||| ||||| || ||||| ||||| ||||| || | |
Sbjct 120561 TATGCCTCCGCAGTCTCGCGCATCTTGGTGAGGACCATTGATGAGATCTCCTCTGGTGTG 120502
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---G 7873
||||| ||| || || || || || |||| | || || || || |||| |
Sbjct 120501 AACTGCTTCTCCTCGCCCTTGAACTCGACTTGTACCACCGGCTT----GC--CACCCTTG 120448
Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933
||| ||||| | | ||| ||||| ||| | || |||| || |||||
Sbjct 120447 TTGATGACCTTGAAGGGGAAATGCTTCATGTCGGCCTGCACCTCAGCATCGTCGAACTTC 120388
Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993
| ||||| || ||||| || || || |||||||| ||||||||||| ||| |||
Sbjct 120387 CGGCCGATCAGGCGCTTGGCGTCGAAGACTGTGTTGACTGGGTTCATGGCGACTTGATTC 120328
Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053
|| || | ||| ||||| || || || | || || || |||||| |||| || ||
Sbjct 120327 TTTGCGGAGTCACCGATGAGGCGCTC---GGTGTCGGTGAAGGCGACGAACGAGGGTGTT 120271
Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113
|| || || || |||||||| || || || || | |||||| | | ||| ||| ||
Sbjct 120270 GTGCGGTTACCCTGGTCGTTGGCGATGATCTCAATGCGGTCATCTCTGTAGATGCCCACA 120211
Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157
|| || || || || || || || |||||||||||| | | |||
Sbjct 120210 CATGAGTAGGTCGTACCCAAGTCGATACCGATTGCTGGTGCCAT 120167
Score = 174 bits (192), Expect = 2e-38
Identities = 261/371 (70%), Gaps = 0/371 (0%)
Strand=Plus/Minus
Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081
|||||||| ||||| | || ||||| || || ||||| |||||||| || | |||
Sbjct 121351 ATGGCGGCCTGGACGGCGGCACCGTAGGCAACGGCCTCGTCGGGGTTGATAGAGCGATTG 121292
Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141
| || || ||||| || | || || | ||| | || | || || || || || |||
Sbjct 121291 GGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGACCTTGGGAATACGGGTGGAT 121232
Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201
||||||||||| ||||| || | || || || |||||||| | ||| || || ||
Sbjct 121231 CCACCGACCAAGACGATCTCGTGGACGGAAGACTTGTCGATCTTGGCGTCGCGCAGAGTG 121172
Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261
||||| || ||||| ||||| | |||| ||||| ||||| || || |||
Sbjct 121171 CGCTCGACGGGCTCCATGGTGGAGCGGAAGAGGTCCTGGCACAGCTCCTCGAAGCGGGCA 121112
Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321
||||| ||||| || ||||| || || || ||||| | ||| || || || |||| ||
Sbjct 121111 CGGGTGATGGAGGTGTAGAAGTCGACACCCTCGTAGAGCGAGTCGATCTCGATGGAGGTC 121052
Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381
||||| | ||||| | |||||||| |||||||| || || || || | ||| || |||
Sbjct 121051 TGTGCGGAGGAAGAGAGAGTTCGCTTCGCGCGCTCGCAAGCGGTGCGCAGACGGCGGAGG 120992
Query 7382 GCACGCGGGTT 7392
|| || | |||
Sbjct 120991 GCGCGGGCGTT 120981
>seq2876
Length=450610
Score = 98.7 bits (108), Expect = 1e-15
Identities = 220/327 (67%), Gaps = 5/327 (2%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||| | || || || || ||||| | || || || |||| |||
Sbjct 268904 TCGAAGTCCTCACCACCGAGATGGGTGTCACCGGCGGTAGATTGAACCTCGAAGACACCC 268963
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA-GTAC 7575
|| | | | || | || ||||| || ||||||||||| || || | | || | |
Sbjct 268964 TGGTCGACGGTCAAGACGGAGACATCGAAAGTACCACCACCGAGATCGTAGACGATGATC 269023
Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
||| || | ||| | |||| ||||| ||||| || | ||| || || || || ||
Sbjct 269024 TGGCGT-TCCTTGTC---GGTCTTGTCGAGGCCGTAGGCCAAAGCGGCGGCGGTGGGCTC 269079
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| | | || ||| ||| || ||||| || | | ||||| || || || ||
Sbjct 269080 GTTGACCACGCGGAGAACGTTGAGACCAGCGATCGCGCCGGCATCCTTGGTGGCGGCACG 269139
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| | ||||| |||||||| || || || ||||| |||| |||| |||| |||||
Sbjct 269140 CTGAGCGTCGTTGAAGTAGGCTGGAACAGTGACGACTGCGTTGCTGACCTTCTCTCCGAG 269199
Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782
|| || || |||| || ||||| ||
Sbjct 269200 GTAGGACTCGGCGACCTCCTTCATCTT 269226
>seq795
Length=24247
Score = 98.7 bits (108), Expect = 1e-15
Identities = 212/315 (67%), Gaps = 3/315 (1%)
Strand=Plus/Plus
Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527
|||||||||||| || || || ||||| || ||||| |||| ||| || | |||||
Sbjct 3965 ACCACCCAAGTGAGTGTCACCAGCGGTAGCCTTGACAGTGAAGACACCACCCTGAATGTG 4024
Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587
| | || ||||| || || |||||||| || || | || || ||||| || |
Sbjct 4025 GAGAAGGGAGACATCGAAAGTGCCACCACCAAGATCGTAGATCAGGACGTTGCGCTCCTT 4084
Query 7588 GTC--TTTGTTCTTAT-CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAAT 7644
||| | | | || | |||||||| |||||||| || || || || || || || ||
Sbjct 4085 GTCAGACTTTCCGGATCCAAGACCGTAGGCGATAGCGGCAGCGGTAGGCTCGTTGATGAT 4144
Query 7645 ACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704
|| ||| ||| ||||||| || | | || || || || ||||| | || ||
Sbjct 4145 GCGGAGAACGTTGAGGCCAGAGATGGCACCGGCGTCCTTGGTAGCTTGCCTCTGGTTGTC 4204
Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764
||| ||||| || || || || | ||| || | | ||| ||||| || || | ||
Sbjct 4205 GTTGAAGTATGCGGGAACGGTGATGACGGCCTTGGAGACCTTCTTGCCAAGCTTGACCTC 4264
Query 7765 CGCGATATCTTTCAT 7779
||||| || |||||
Sbjct 4265 AGCGATTTCCTTCAT 4279
>seq2415
Length=191159
Score = 86.0 bits (94), Expect = 8e-12
Identities = 119/162 (73%), Gaps = 6/162 (4%)
Strand=Plus/Minus
Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGT 7655
||| ||||||||||| |||| || || || || || || || || | ||| | ||||
Sbjct 9513 CTTCTCGAGACCGTAAGCGAGGGCAGCAGCGGTAGGCTCGTTGATCACACGGTGAACAG- 9455
Query 7656 TCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713
|||| |||| ||| ||| | ||||| || || ||||||| ||| ||||| |||||
Sbjct 9454 TCAGACCAGAAAT--TTGACCGGCATCCTTGGTTGCTTGTCTCTGCTGGTCGTTGAAGTA 9397
Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
||| || || ||||| || |||| | ||| ||||| |||||
Sbjct 9396 GGCGGGAACAGTTACAACAGCGTTCTTGATGTTCTTTCCGAG 9355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635103639465320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |