Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1589 206 3e-48 seq1655 109 7e-19 seq2039 84.2 3e-11 >seq1589 Length=144912 Score = 206 bits (228), Expect = 3e-48 Identities = 962/1498 (64%), Gaps = 57/1498 (4%) Strand=Plus/Plus Query 111897 ATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCC 111956 || || |||||||| || ||| | ||| | | || ||||| || || |||||| | Sbjct 46895 ATCAGCGGTACAAACGGAACATCCAACGGTCTCGTACCCATGCTGCGTGTGTTTAACAAC 46954 Query 111957 ACAGCGCGCTATGTAAACCAAGCTGGGCGTCG-CAAGGGATCTA------TCGCAGTCTA 112009 || || ||||| || |||| ||||| | |||| || || |||| | || Sbjct 46955 ACCGCTCGCTACGTCGACCA----GGGCGGCAACAAGCGACCTGGTGCTTTCGCCATGTA 47010 Query 112010 TCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGA 112069 | |||||||||||||| ||| || | ||| | || | || ||||| || | Sbjct 47011 CATCGAGCCATGGCACGCAGATGTCTTCTCCTTCTTGGATCTCCGCAAGAACCACGGAAA 47070 Query 112070 TGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAA 112129 ||||||| || ||||||| | |||| || ||||||| | || ||||| |||||||| Sbjct 47071 GGAGGAGGTTCGTGCCCGCGATTTGTTCTACGGTCTCTGGGTGCCTGATCTGTTCATGAA 47130 Query 112130 GAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTC 112189 | | |||||| ||| || |||| || | | || || || || |||||||| | Sbjct 47131 GCGTGTTGAGCAGAACACCACTTGGACTTTGATGTGCCCTCACGAGTGCCCCGGTCTGGC 47190 Query 112190 CGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGA----AAGTC 112245 |||| | || | ||||| || | || ||| |||||| || ||| Sbjct 47191 TGATGTCTACGGCGCTGAGTTCGAGGAGCTGTACGAGCGATACGAGCGTGAGGGCAAG-- 47248 Query 112246 GGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACC 112304 || || || ||| || | ||| | || | | ||| | || || ||| || |||| ||| Sbjct 47249 GGTCG--TGAGACAGTCCGCGCT-CAGAAGCTCTGGTACGCCATCCTCGAGGCTCAGACC 47305 Query 112305 GAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 112364 ||||| || || ||||| || || ||||| ||||| ||| ||||| || || ||| Sbjct 47306 GAGACCGGCACGCCATACATCCTCTACAAGGACGCTGCCAACGGCAAGAGCAACCAGAAG 47365 Query 112365 AATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAA 112424 || ||||| ||| || ||||||||||| || || ||| | || | || | Sbjct 47366 AACTTGGGGACCATCCGCAGCTCCAACCTCTGCACCGAGATCATCGAGTACACTGCTCCT 47425 Query 112425 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 112484 |||||| || ||||| ||||| ||||| |||| ||||||| || || || || | Sbjct 47426 GATGAGGTCGCCGTGTGCAACCTTGCATCTCTCGCCCTCCCCACCTACGTCGA--CATTG 47483 Query 112485 ACAAAGA-CATTT-GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACC 112542 | || || | ||| || | ||| || |||||| | || || |||| ||||| || ||| Sbjct 47484 AGAACGAGCGTTTCGACTTTGACAAGCTCCACCAGGTCACTCAAACCGTCACCAAGAACT 47543 Query 112543 TAAACAGAGTTATTGATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATG 112601 | |||| | || || || ||||| || ||| ||||| || || | Sbjct 47544 TGAACAAGATCATCGAGGTCAACCACTACCCAGTGCCAGA-GGCTCGCAAGAGCAACTTC 47602 Query 112602 AGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCG 112660 | |||||||| || |||||||||||| | ||||| || |||| ||| | || || || Sbjct 47603 CGTCACCGTCCCATCGGTCTCGGTGTCAACGGTCTTGCCGATGCTTTCTTGGCTCTG-CG 47661 Query 112661 CCACGCATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGT 112719 || || ||| || || || || | |||| | || || ||||| || | Sbjct 47662 -CATGCCTTTCGACTCTCCTGAGGCTCGCCAGCTCAACATTCAGATCTTCGAGACCATCT 47720 Query 112720 ATCACGCCGCT-------CTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATAT 112772 ||||||| ||| ||| | |||| ||| || || | ||| ||||| Sbjct 47721 ATCACGCTGCTCTCACCGCTTCATGCGATCTCG----CTGCTAAGCT---TGGACCATAC 47773 Query 112773 GAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGG 112831 || || | ||||| ||||| | ||| |||||| | |||||| | || ||||||| | Sbjct 47774 GAGACATACGAGGGCTCTCCCGTTTC-CAAGGGCGAGCTTCAGTACGACATGTGGG-GTG 47831 Query 112832 TGAGACCAAGCT--TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGT 112889 ||| || | || || || ||||||| ||| ||||||| ||| ||| | ||| Sbjct 47832 TGACTCCCA-CTGATCTCTGGGACTGGGCCGCACTCAAGGCCAAGATCGCCGAGCACGGT 47890 Query 112890 CTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGT 112949 |||| ||| || | | || || ||||| || || |||||| | || ||| ||||| Sbjct 47891 GTTCGCAACTCGCTCCTCGTCGCTCCCATGCCGACTGCATCCACCTCGCAGATCATGGGT 47950 Query 112950 AATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGA 113009 || || ||||| || || ||||| | |||||||| | | ||||| || Sbjct 47951 TTCAACGAGTGCTTCGAGCCATACACCAGCAACATCTACTCCCGTCGTGTGCTCGCTGGC 48010 Query 113010 GAGTTTGTGATTGTCAACAAGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGT 113067 ||||| | |||||||| ||| | | | ||| | ||| ||| || |||| Sbjct 48011 GAGTTCCAGGTTGTCAAC--CCATGGTTGCTCAAGGACTTGGTTGAGCGTGGCCTGTGGT 48068 Query 113068 CCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATA 113127 | | | |||||| | | ||| | | |||||||||||||| ||| | | Sbjct 48069 CAGACAACATGAAGAACCGCATCATCGCCGATGGTGGTTCCATTCAGCGCATTCCAAACA 48128 Query 113128 TTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCA 113187 |||| || || | ||| |||||| || || ||||| |||| | | || Sbjct 48129 TTCCTGACGACCTCAAGGCTTTGTACAAGACTGTCTGGGAGATCAGCCAGCGTCACATCG 48188 Query 113188 TTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCA 113247 | | ||| |||| || |||||| ||||| ||||| ||| || |||| | || Sbjct 48189 TCCAGATGTCCGCTGACCGTGGTGCATTCATCGATCAGTCTCAGAGCCTGAACATCCACA 48248 Query 113248 TGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTC 113307 || | || |||||| |||| || | |||||| | | | |||||| || | Sbjct 48249 TGAAGGAGCCGACGATGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGCC 48308 Query 113308 TCAAAACGGGGATGTATTACCTCCGATCTAAGGCAAAGGC-GCGCCCAATTCAGTTCA 113364 | || || || ||||| ||||| || | | ||| | | |||||| |||||||||| Sbjct 48309 TGAAGACTGGCATGTACTACCTTCGCACAATGGCGGCGTCTGCGCCC-ATTCAGTTCA 48365 >seq1655 Length=66175 Score = 109 bits (120), Expect = 7e-19 Identities = 165/227 (73%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 102090 CTCTTTGAAGCCATCCA-AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAA 102148 ||||| | |||||| | |||| | ||||| || | ||||| || || ||||| || Sbjct 51638 CTCTTCAACGCCATCGACAACA-TCCCATGCATCCGTAAGAAGGCTGACTGGGCGCTGCG 51696 Query 102149 GTGGTT-TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTG 102207 ||| | | |||| | || ||||||| || ||| |||| ||||| | | Sbjct 51697 ATGGATCTCCGACAAGAACTCGA-CCTTTGCCTGCCGTCTCATCGCCTTTGCCGCCATCG 51755 Query 102208 AGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTC 102266 |||| ||||||||||| || || ||| ||| | || | ||| | |||||||| |||||| Sbjct 51756 AGGGCATCTTCTTCTCCGGATCATTC-GCGTCCATCTTCTGGTTGAAGAAGCGTGGTCTC 51814 Query 102267 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 ||||| || ||| ||||||||||||||| ||||| ||||||||||| Sbjct 51815 ATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGG 51861 >seq2039 Length=622076 Score = 84.2 bits (92), Expect = 3e-11 Identities = 225/336 (67%), Gaps = 10/336 (3%) Strand=Plus/Plus Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791 || || |||||||| || ||||||| ||| || ||||||||||| | | | ||||| Sbjct 530520 AGGCCTTTGATGTGAGAGCCGTCGTGATCCTGGTCGGTCATGATCATCAAATGTCCATAT 530579 Query 176792 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 176849 || |||||| |||| || ||||| ||||| || ||||||| |||||||| Sbjct 530580 CGCAAGCTC-TTTGCATCAGTGTACTCCTTCTTGTGTTGGAGCCCCAAGAACTTCTTGAT 530638 Query 176850 GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTA 176908 | || |||| ||| || | || ||| ||||| ||||| || || ||| Sbjct 530639 GTTC--TGAATCTCAGCATTCTTCGAGATCTGATCAACAGATGCATCGCGGACGTTCAAG 530696 Query 176909 CACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCA 176968 ||| || || | ||||| |||||| |||| ||| | ||||||| | || || Sbjct 530697 ATCTTTCCGCGCAACGGGAACACACCGAAGTGGTCGGGGTTGACCACAGCACGTCCGGCC 530756 Query 176969 ACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGT 177028 | || ||| ||||||||||| || |||| ||| || |||||| || | || Sbjct 530757 AGGGCAAGCAGGGCAGCAGAATCACCTTCAGTCAAGATCAGAGTACACCTG--TGTCCGT 530814 Query 177029 GC--CGTACCCGCCTTGTTCGCATCATCCAATTTGG 177062 | || || |||||||||||||| ||| |||| Sbjct 530815 CCTTGGTGCCAGCCTTGTTCGCATCTGTCAACTTGG 530850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620713900164560