Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq1589 206 3e-48
seq1655 109 7e-19
seq2039 84.2 3e-11
>seq1589
Length=144912
Score = 206 bits (228), Expect = 3e-48
Identities = 962/1498 (64%), Gaps = 57/1498 (4%)
Strand=Plus/Plus
Query 111897 ATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCC 111956
|| || |||||||| || ||| | ||| | | || ||||| || || |||||| |
Sbjct 46895 ATCAGCGGTACAAACGGAACATCCAACGGTCTCGTACCCATGCTGCGTGTGTTTAACAAC 46954
Query 111957 ACAGCGCGCTATGTAAACCAAGCTGGGCGTCG-CAAGGGATCTA------TCGCAGTCTA 112009
|| || ||||| || |||| ||||| | |||| || || |||| | ||
Sbjct 46955 ACCGCTCGCTACGTCGACCA----GGGCGGCAACAAGCGACCTGGTGCTTTCGCCATGTA 47010
Query 112010 TCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGA 112069
| |||||||||||||| ||| || | ||| | || | || ||||| || |
Sbjct 47011 CATCGAGCCATGGCACGCAGATGTCTTCTCCTTCTTGGATCTCCGCAAGAACCACGGAAA 47070
Query 112070 TGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAA 112129
||||||| || ||||||| | |||| || ||||||| | || ||||| ||||||||
Sbjct 47071 GGAGGAGGTTCGTGCCCGCGATTTGTTCTACGGTCTCTGGGTGCCTGATCTGTTCATGAA 47130
Query 112130 GAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTC 112189
| | |||||| ||| || |||| || | | || || || || |||||||| |
Sbjct 47131 GCGTGTTGAGCAGAACACCACTTGGACTTTGATGTGCCCTCACGAGTGCCCCGGTCTGGC 47190
Query 112190 CGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGA----AAGTC 112245
|||| | || | ||||| || | || ||| |||||| || |||
Sbjct 47191 TGATGTCTACGGCGCTGAGTTCGAGGAGCTGTACGAGCGATACGAGCGTGAGGGCAAG-- 47248
Query 112246 GGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACC 112304
|| || || ||| || | ||| | || | | ||| | || || ||| || |||| |||
Sbjct 47249 GGTCG--TGAGACAGTCCGCGCT-CAGAAGCTCTGGTACGCCATCCTCGAGGCTCAGACC 47305
Query 112305 GAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 112364
||||| || || ||||| || || ||||| ||||| ||| ||||| || || |||
Sbjct 47306 GAGACCGGCACGCCATACATCCTCTACAAGGACGCTGCCAACGGCAAGAGCAACCAGAAG 47365
Query 112365 AATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAA 112424
|| ||||| ||| || ||||||||||| || || ||| | || | || |
Sbjct 47366 AACTTGGGGACCATCCGCAGCTCCAACCTCTGCACCGAGATCATCGAGTACACTGCTCCT 47425
Query 112425 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 112484
|||||| || ||||| ||||| ||||| |||| ||||||| || || || || |
Sbjct 47426 GATGAGGTCGCCGTGTGCAACCTTGCATCTCTCGCCCTCCCCACCTACGTCGA--CATTG 47483
Query 112485 ACAAAGA-CATTT-GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACC 112542
| || || | ||| || | ||| || |||||| | || || |||| ||||| || |||
Sbjct 47484 AGAACGAGCGTTTCGACTTTGACAAGCTCCACCAGGTCACTCAAACCGTCACCAAGAACT 47543
Query 112543 TAAACAGAGTTATTGATAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATG 112601
| |||| | || || || ||||| || ||| ||||| || || |
Sbjct 47544 TGAACAAGATCATCGAGGTCAACCACTACCCAGTGCCAGA-GGCTCGCAAGAGCAACTTC 47602
Query 112602 AGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCG 112660
| |||||||| || |||||||||||| | ||||| || |||| ||| | || || ||
Sbjct 47603 CGTCACCGTCCCATCGGTCTCGGTGTCAACGGTCTTGCCGATGCTTTCTTGGCTCTG-CG 47661
Query 112661 CCACGCATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGT 112719
|| || ||| || || || || | |||| | || || ||||| || |
Sbjct 47662 -CATGCCTTTCGACTCTCCTGAGGCTCGCCAGCTCAACATTCAGATCTTCGAGACCATCT 47720
Query 112720 ATCACGCCGCT-------CTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATAT 112772
||||||| ||| ||| | |||| ||| || || | ||| |||||
Sbjct 47721 ATCACGCTGCTCTCACCGCTTCATGCGATCTCG----CTGCTAAGCT---TGGACCATAC 47773
Query 112773 GAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGG 112831
|| || | ||||| ||||| | ||| |||||| | |||||| | || ||||||| |
Sbjct 47774 GAGACATACGAGGGCTCTCCCGTTTC-CAAGGGCGAGCTTCAGTACGACATGTGGG-GTG 47831
Query 112832 TGAGACCAAGCT--TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGT 112889
||| || | || || || ||||||| ||| ||||||| ||| ||| | |||
Sbjct 47832 TGACTCCCA-CTGATCTCTGGGACTGGGCCGCACTCAAGGCCAAGATCGCCGAGCACGGT 47890
Query 112890 CTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGT 112949
|||| ||| || | | || || ||||| || || |||||| | || ||| |||||
Sbjct 47891 GTTCGCAACTCGCTCCTCGTCGCTCCCATGCCGACTGCATCCACCTCGCAGATCATGGGT 47950
Query 112950 AATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGA 113009
|| || ||||| || || ||||| | |||||||| | | ||||| ||
Sbjct 47951 TTCAACGAGTGCTTCGAGCCATACACCAGCAACATCTACTCCCGTCGTGTGCTCGCTGGC 48010
Query 113010 GAGTTTGTGATTGTCAACAAGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGT 113067
||||| | |||||||| ||| | | | ||| | ||| ||| || ||||
Sbjct 48011 GAGTTCCAGGTTGTCAAC--CCATGGTTGCTCAAGGACTTGGTTGAGCGTGGCCTGTGGT 48068
Query 113068 CCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATA 113127
| | | |||||| | | ||| | | |||||||||||||| ||| | |
Sbjct 48069 CAGACAACATGAAGAACCGCATCATCGCCGATGGTGGTTCCATTCAGCGCATTCCAAACA 48128
Query 113128 TTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCA 113187
|||| || || | ||| |||||| || || ||||| |||| | | ||
Sbjct 48129 TTCCTGACGACCTCAAGGCTTTGTACAAGACTGTCTGGGAGATCAGCCAGCGTCACATCG 48188
Query 113188 TTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCA 113247
| | ||| |||| || |||||| ||||| ||||| ||| || |||| | ||
Sbjct 48189 TCCAGATGTCCGCTGACCGTGGTGCATTCATCGATCAGTCTCAGAGCCTGAACATCCACA 48248
Query 113248 TGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTC 113307
|| | || |||||| |||| || | |||||| | | | |||||| || |
Sbjct 48249 TGAAGGAGCCGACGATGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGCC 48308
Query 113308 TCAAAACGGGGATGTATTACCTCCGATCTAAGGCAAAGGC-GCGCCCAATTCAGTTCA 113364
| || || || ||||| ||||| || | | ||| | | |||||| ||||||||||
Sbjct 48309 TGAAGACTGGCATGTACTACCTTCGCACAATGGCGGCGTCTGCGCCC-ATTCAGTTCA 48365
>seq1655
Length=66175
Score = 109 bits (120), Expect = 7e-19
Identities = 165/227 (73%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 102090 CTCTTTGAAGCCATCCA-AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAA 102148
||||| | |||||| | |||| | ||||| || | ||||| || || ||||| ||
Sbjct 51638 CTCTTCAACGCCATCGACAACA-TCCCATGCATCCGTAAGAAGGCTGACTGGGCGCTGCG 51696
Query 102149 GTGGTT-TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTG 102207
||| | | |||| | || ||||||| || ||| |||| ||||| | |
Sbjct 51697 ATGGATCTCCGACAAGAACTCGA-CCTTTGCCTGCCGTCTCATCGCCTTTGCCGCCATCG 51755
Query 102208 AGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTC 102266
|||| ||||||||||| || || ||| ||| | || | ||| | |||||||| ||||||
Sbjct 51756 AGGGCATCTTCTTCTCCGGATCATTC-GCGTCCATCTTCTGGTTGAAGAAGCGTGGTCTC 51814
Query 102267 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313
||||| || ||| ||||||||||||||| ||||| |||||||||||
Sbjct 51815 ATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGG 51861
>seq2039
Length=622076
Score = 84.2 bits (92), Expect = 3e-11
Identities = 225/336 (67%), Gaps = 10/336 (3%)
Strand=Plus/Plus
Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791
|| || |||||||| || ||||||| ||| || ||||||||||| | | | |||||
Sbjct 530520 AGGCCTTTGATGTGAGAGCCGTCGTGATCCTGGTCGGTCATGATCATCAAATGTCCATAT 530579
Query 176792 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 176849
|| |||||| |||| || ||||| ||||| || ||||||| ||||||||
Sbjct 530580 CGCAAGCTC-TTTGCATCAGTGTACTCCTTCTTGTGTTGGAGCCCCAAGAACTTCTTGAT 530638
Query 176850 GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTA 176908
| || |||| ||| || | || ||| ||||| ||||| || || |||
Sbjct 530639 GTTC--TGAATCTCAGCATTCTTCGAGATCTGATCAACAGATGCATCGCGGACGTTCAAG 530696
Query 176909 CACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCA 176968
||| || || | ||||| |||||| |||| ||| | ||||||| | || ||
Sbjct 530697 ATCTTTCCGCGCAACGGGAACACACCGAAGTGGTCGGGGTTGACCACAGCACGTCCGGCC 530756
Query 176969 ACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGT 177028
| || ||| ||||||||||| || |||| ||| || |||||| || | ||
Sbjct 530757 AGGGCAAGCAGGGCAGCAGAATCACCTTCAGTCAAGATCAGAGTACACCTG--TGTCCGT 530814
Query 177029 GC--CGTACCCGCCTTGTTCGCATCATCCAATTTGG 177062
| || || |||||||||||||| ||| ||||
Sbjct 530815 CCTTGGTGCCAGCCTTGTTCGCATCTGTCAACTTGG 530850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620713900164560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |