Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1589 228 1e-54 >seq1589 Length=144912 Score = 228 bits (252), Expect = 1e-54 Identities = 1114/1739 (64%), Gaps = 55/1739 (3%) Strand=Plus/Minus Query 109509 CTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGAT---ACACTTTTG 109565 ||||||||||||||||||| |||||| ||||| | ||| | || ||| || || | Sbjct 48232 CTGAGACTGATCGATGAATGCACCACGGTCAGCGGACATCTGGACGATGTGACGCT---G 48176 Query 109566 GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTT 109625 ||| || ||||||||||||||||||||| ||||| || || ||||||| ||| Sbjct 48175 GCTGATCTCCCAGACAGTCTTGTACAAAGCCTTGAGGTCGTCAGGAATGTTTGGAATGCG 48116 Query 109626 TTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGAC 109685 ||||| || |||||| | | ||| | | |||||| | | ||||| || || Sbjct 48115 CTGAATGGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCTGACCACAGGCCACG 48056 Query 109686 CTTTTTGAGATCGTCAA-CAAG-ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTG 109743 || | || | | ||| ||| |||||| || || || ||||| || Sbjct 48055 CTCAACCAAGTCCTTGAGCAACCATGG--GTTGACAACCTGGAACTCGCCAGCGAGCACA 47998 Query 109744 CGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGT 109803 || ||| ||||||||| | ||||| || ||||| ||||| ||| || | ||| || Sbjct 47997 CGACGGGAGTAGATGTTGCTGGTGTATGGCTCGAAGCACTCGTTGAAACCCATGATCTGC 47938 Query 109804 GCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT--TCGTCT 109861 | ||||| || || ||||||||||| | ||| || ||| || | ||| | ||| | Sbjct 47937 GAGGTGGATGCAGTCGGCATGGGAGCGACGAGGAGCGAGTTGCGAACACCGTGCTCGGCG 47878 Query 109862 TTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCC 109921 | || | | | |||| |||| || | || || | |||| |||| || Sbjct 47877 ATCTTGGC-CTTG-AGTGCGGCCCAGTCCCAGAGATCAGTGGG---AGTCACACC---CC 47826 Query 109922 ACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACC 109981 |||| || ||||| | |||| | | | ||||| |||| | | ||||||| | | Sbjct 47825 ACATGTCGTACTGAAGCTCGCCCTTGGAAACGGGAGAGCCCTCGTATGTCTCGTATGGTC 47766 Query 109982 CCTCAACCT---CGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAA 110038 | || || | || | ||| ||||||| || || || ||||| || ||||| | Sbjct 47765 C---AAGCTTAGCAGCGAGATCGCATGAAGCGGTGAGAGCAGCGTGATAGATGGTCTCGA 47709 Query 110039 AAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CACAAAGAATA 110097 | || ||| || | |||||| ||| | ||||||| || | | || | || | Sbjct 47708 AGATCTGAATGTTGAGCTGGCGAGCCTCAGGAGAGTCGAAAGGCATGCGCAGAGCCAAGA 47649 Query 110098 AACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGT 110157 || |||| || ||||| | ||||||||||| ||||| || || | ||| | | | Sbjct 47648 AAG-CATCGGCAAGACCGTTGACACCGAGACCGATGGGACGGTGACGGAAGTT-GCTCTT 47591 Query 110158 -CGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCAC 110216 ||||| | || ||||| |||| ||||||| | || | ||||| || || Sbjct 47590 GCGAGCCTCTGGCACTGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTGGTGAC 47531 Query 110217 AGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAA-CGTTTTCGT-CTCCTTATTGACA 110274 || | |||| | ||||| ||||| | ||||| || | ||| ||| | | ||| Sbjct 47530 GGTTTGAGTGACCTGGTGGAGCTTGTCAAAGTCGAAACGCT--CGTTCTCAATGTCGACG 47473 Query 110275 TATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTAT 110334 || ||||||| || | ||| ||||| |||||||| | ||| || | ||||| Sbjct 47472 TAGGTGGGGAGGGCGAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTAC 47413 Query 110335 TCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGAT 110394 || | || || || || | |||||| || ||| |||||||||||||| || Sbjct 47412 TCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTC 47353 Query 110395 TTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTG 110454 ||| |||| || ||||| ||||| |||||||| || || || || ||||| | || | Sbjct 47352 TTGCCGTTGGCAGCGTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCG 47293 Query 110455 AGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTC 110513 || ||||| | ||| | | || | ||| |||| || | | | || || ||| Sbjct 47292 AGGATGGCGTACCAGAGCTTCTG-AGCGCGGACTGTCTCACGACCCTTGCCCTCACGCTC 47234 Query 110514 GTACTTGGT-GTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCT 110572 ||| | | | ||||| ||||| || || ||||| ||||||| ||||| || Sbjct 47233 GTA-TCGCTCGTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACT 47175 Query 110573 TGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAG 110632 || || || | | | |||| | || |||||| | |||||||||||| |||| Sbjct 47174 CGTGAGGGCACATCAAAGTCCAAGTGGTGTTCTGCTCAACACGCTTCATGAACAGATCAG 47115 Query 110633 GAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGC 110692 | | ||| | | |||| | || ||| |||| |||| || | || ||||| || Sbjct 47114 GCACCCAGAGACCGTAGAACAAATCGCGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGC 47055 Query 110693 GTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATC 110752 | || ||||| ||| | || ||| | ||||||||| |||| || | |||| | | Sbjct 47054 GGAGATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCGAAAGCAC 46995 Query 110753 CCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGA 110806 | | | || || |||||| || ||||| || ||| || || || | | Sbjct 46994 C---AGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCA 46938 Query 110807 GCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCA 110865 |||| || | | || | |||| || |||||||| || || | || | | | || Sbjct 46937 GCATGGGTACGAGACCGTTGGATGTTCCGTTTGTACCGCTGATGTATGCTC-CAGTCGCG 46879 Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTC 110924 || ||| ||| | | | || || || || || ||| || || || || Sbjct 46878 CGGATGCGGTGAACGTTGAGTCCGATGCCGCCAGCGTTCTTGGAGATCATGGCGCAGGTC 46819 Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984 | | | || | || || |||||||| || |||| || | || || ||||| || Sbjct 46818 T-TCAAGGTGTCGTAGATGCCATCAATGCTGTCATCCTTCATGTCGATGAGGAAGCAGGA 46760 Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044 | || ||||| || ||||| || |||| || ||||| | ||||| ||| || Sbjct 46759 TGCCAGCTGAGCGTTGGGTGTTCCGGCGCTGAACAGCGTAGGCGAAGCATGTGTGA--AG 46702 Query 111045 ACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATA 111102 |||| ||||| | |||||| || || | || || | || | |||||| || Sbjct 46701 TACTTGTTCGACATGTAGTTGTAGGTCTCAATGGCAGACTCAATGTCATCACCGTGGATG 46642 Query 111103 CCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGC 111162 |||| ||||| ||||||| ||| | ||| || | ||| | ||| || | | | | Sbjct 46641 CCAACAGCAACACGCATGATCATCTGTTGTGGTCTCTCGGCAACCTTGCCGTTGATCCTC 46582 Query 111163 TGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 ||||||| |||| || ||||||| ||||||||| | | ||| |||||||| Sbjct 46581 AGAAGGTATGATCTCTCCAGCGTCTTGAATCCAAAGTATTGGTAGTTGAAGTCACGATC 46523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588948958639400