Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1589 228 1e-54
>seq1589
Length=144912
Score = 228 bits (252), Expect = 1e-54
Identities = 1114/1739 (64%), Gaps = 55/1739 (3%)
Strand=Plus/Minus
Query 109509 CTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGAT---ACACTTTTG 109565
||||||||||||||||||| |||||| ||||| | ||| | || ||| || || |
Sbjct 48232 CTGAGACTGATCGATGAATGCACCACGGTCAGCGGACATCTGGACGATGTGACGCT---G 48176
Query 109566 GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTT 109625
||| || ||||||||||||||||||||| ||||| || || ||||||| |||
Sbjct 48175 GCTGATCTCCCAGACAGTCTTGTACAAAGCCTTGAGGTCGTCAGGAATGTTTGGAATGCG 48116
Query 109626 TTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGAC 109685
||||| || |||||| | | ||| | | |||||| | | ||||| || ||
Sbjct 48115 CTGAATGGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCTGACCACAGGCCACG 48056
Query 109686 CTTTTTGAGATCGTCAA-CAAG-ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTG 109743
|| | || | | ||| ||| |||||| || || || ||||| ||
Sbjct 48055 CTCAACCAAGTCCTTGAGCAACCATGG--GTTGACAACCTGGAACTCGCCAGCGAGCACA 47998
Query 109744 CGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGT 109803
|| ||| ||||||||| | ||||| || ||||| ||||| ||| || | ||| ||
Sbjct 47997 CGACGGGAGTAGATGTTGCTGGTGTATGGCTCGAAGCACTCGTTGAAACCCATGATCTGC 47938
Query 109804 GCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT--TCGTCT 109861
| ||||| || || ||||||||||| | ||| || ||| || | ||| | ||| |
Sbjct 47937 GAGGTGGATGCAGTCGGCATGGGAGCGACGAGGAGCGAGTTGCGAACACCGTGCTCGGCG 47878
Query 109862 TTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCC 109921
| || | | | |||| |||| || | || || | |||| |||| ||
Sbjct 47877 ATCTTGGC-CTTG-AGTGCGGCCCAGTCCCAGAGATCAGTGGG---AGTCACACC---CC 47826
Query 109922 ACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACC 109981
|||| || ||||| | |||| | | | ||||| |||| | | ||||||| | |
Sbjct 47825 ACATGTCGTACTGAAGCTCGCCCTTGGAAACGGGAGAGCCCTCGTATGTCTCGTATGGTC 47766
Query 109982 CCTCAACCT---CGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAA 110038
| || || | || | ||| ||||||| || || || ||||| || ||||| |
Sbjct 47765 C---AAGCTTAGCAGCGAGATCGCATGAAGCGGTGAGAGCAGCGTGATAGATGGTCTCGA 47709
Query 110039 AAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CACAAAGAATA 110097
| || ||| || | |||||| ||| | ||||||| || | | || | || |
Sbjct 47708 AGATCTGAATGTTGAGCTGGCGAGCCTCAGGAGAGTCGAAAGGCATGCGCAGAGCCAAGA 47649
Query 110098 AACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGT 110157
|| |||| || ||||| | ||||||||||| ||||| || || | ||| | | |
Sbjct 47648 AAG-CATCGGCAAGACCGTTGACACCGAGACCGATGGGACGGTGACGGAAGTT-GCTCTT 47591
Query 110158 -CGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCAC 110216
||||| | || ||||| |||| ||||||| | || | ||||| || ||
Sbjct 47590 GCGAGCCTCTGGCACTGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTGGTGAC 47531
Query 110217 AGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAA-CGTTTTCGT-CTCCTTATTGACA 110274
|| | |||| | ||||| ||||| | ||||| || | ||| ||| | | |||
Sbjct 47530 GGTTTGAGTGACCTGGTGGAGCTTGTCAAAGTCGAAACGCT--CGTTCTCAATGTCGACG 47473
Query 110275 TATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTAT 110334
|| ||||||| || | ||| ||||| |||||||| | ||| || | |||||
Sbjct 47472 TAGGTGGGGAGGGCGAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTAC 47413
Query 110335 TCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGAT 110394
|| | || || || || | |||||| || ||| |||||||||||||| ||
Sbjct 47412 TCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTC 47353
Query 110395 TTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTG 110454
||| |||| || ||||| ||||| |||||||| || || || || ||||| | || |
Sbjct 47352 TTGCCGTTGGCAGCGTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCG 47293
Query 110455 AGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTC 110513
|| ||||| | ||| | | || | ||| |||| || | | | || || |||
Sbjct 47292 AGGATGGCGTACCAGAGCTTCTG-AGCGCGGACTGTCTCACGACCCTTGCCCTCACGCTC 47234
Query 110514 GTACTTGGT-GTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCT 110572
||| | | | ||||| ||||| || || ||||| ||||||| ||||| ||
Sbjct 47233 GTA-TCGCTCGTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACT 47175
Query 110573 TGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAG 110632
|| || || | | | |||| | || |||||| | |||||||||||| ||||
Sbjct 47174 CGTGAGGGCACATCAAAGTCCAAGTGGTGTTCTGCTCAACACGCTTCATGAACAGATCAG 47115
Query 110633 GAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGC 110692
| | ||| | | |||| | || ||| |||| |||| || | || ||||| ||
Sbjct 47114 GCACCCAGAGACCGTAGAACAAATCGCGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGC 47055
Query 110693 GTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATC 110752
| || ||||| ||| | || ||| | ||||||||| |||| || | |||| | |
Sbjct 47054 GGAGATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCGAAAGCAC 46995
Query 110753 CCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGA 110806
| | | || || |||||| || ||||| || ||| || || || | |
Sbjct 46994 C---AGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCA 46938
Query 110807 GCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCA 110865
|||| || | | || | |||| || |||||||| || || | || | | | ||
Sbjct 46937 GCATGGGTACGAGACCGTTGGATGTTCCGTTTGTACCGCTGATGTATGCTC-CAGTCGCG 46879
Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTC 110924
|| ||| ||| | | | || || || || || ||| || || || ||
Sbjct 46878 CGGATGCGGTGAACGTTGAGTCCGATGCCGCCAGCGTTCTTGGAGATCATGGCGCAGGTC 46819
Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984
| | | || | || || |||||||| || |||| || | || || ||||| ||
Sbjct 46818 T-TCAAGGTGTCGTAGATGCCATCAATGCTGTCATCCTTCATGTCGATGAGGAAGCAGGA 46760
Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044
| || ||||| || ||||| || |||| || ||||| | ||||| ||| ||
Sbjct 46759 TGCCAGCTGAGCGTTGGGTGTTCCGGCGCTGAACAGCGTAGGCGAAGCATGTGTGA--AG 46702
Query 111045 ACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATA 111102
|||| ||||| | |||||| || || | || || | || | |||||| ||
Sbjct 46701 TACTTGTTCGACATGTAGTTGTAGGTCTCAATGGCAGACTCAATGTCATCACCGTGGATG 46642
Query 111103 CCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGC 111162
|||| ||||| ||||||| ||| | ||| || | ||| | ||| || | | | |
Sbjct 46641 CCAACAGCAACACGCATGATCATCTGTTGTGGTCTCTCGGCAACCTTGCCGTTGATCCTC 46582
Query 111163 TGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221
||||||| |||| || ||||||| ||||||||| | | ||| ||||||||
Sbjct 46581 AGAAGGTATGATCTCTCCAGCGTCTTGAATCCAAAGTATTGGTAGTTGAAGTCACGATC 46523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588948958639400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |