Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1655 132 6e-26 seq1589 107 2e-18 >seq1655 Length=66175 Score = 132 bits (146), Expect = 6e-26 Identities = 531/819 (65%), Gaps = 29/819 (4%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| || || |||||||| ||||||||||| || || | ||| ||||| |||||| Sbjct 52167 TAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTGCCTCCGAGGGAGATGTTCTCCATA 52108 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 ||||| || || || | ||||| | ||| || || | | ||||| Sbjct 52107 AAGTCGAAGGGGTTTGTGGCGTTGTAGTGCTTCTGGTTG-----CCGAGTGCCAGGAGGA 52053 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 |||| || | || |||| ||||||| | |||| || | |||||| |||| ||| Sbjct 52052 GACGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCG 51993 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 ||||||||| ||||| || ||| | | ||| || |||| ||||| | | |||| Sbjct 51992 CACATGGGAGGGCGTCTGTGAGAAACTCCTGCTCGATGACAACGGCCTCGGTGATGATGT 51933 Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACG---GCAA 117277 | | | | | | | | || | || | || | | ||| | || | || | Sbjct 51932 CTTCAACAACCTGGTTTGATGGCTTGTT--GTTGAGG-TGGGAGAACAGCAGGCAGGCGA 51876 Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337 | || ||| | ||||| || ||||| || || || || |||||| ||||| |||| Sbjct 51875 AGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCA 51816 Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCC 117396 ||||||| |||||||||||||| | || | ||| |||||| |||||||||||||| ||| Sbjct 51815 TGAGACCACGCTTCTTCAACCAGAAGATGGACGC-GAATGATCCGGAGAAGAAGATGCCC 51757 Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCA 117455 || | ||||| || | || || ||| |||| |||| |||| | | ||| Sbjct 51756 TCGATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGG-TCGAGTTCTTGTCGGAGATCCA 51698 Query 117456 TTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAA 117515 | || ||||| | |||||||| || ||||| | | | |||||| | || | Sbjct 51697 TCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAGAG 51638 Query 117516 CTGC-TTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGC 117574 | | | | || | | || | |||||| | || || | || ||||| ||| Sbjct 51637 GTACGTGCGTTGCTTGGGC-TCGCTGATGTATGTATCGATGAGGAGGGAGTATGTCTCGG 51579 Query 117575 CATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGC 117633 || | | | ||| || | ||| | ||||||| |||| || ||| |||||| Sbjct 51578 AGTGGATGTTCTCCATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGC 51520 Query 117634 ACTTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 117692 || || ||| | || | | | ||| |||||| || ||||||||||| |||| || Sbjct 51519 ACCTC-TCCACTGAAGCGCTCAATGAGGTTCTCATTGACGATTCCATCGGAGGCAGCGAA 51461 Query 117693 GAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAGG---GTCTTCCAGTC 117749 ||| ||||||| || ||||| || | || || ||| | |||||||| Sbjct 51460 GAAGGCCAGGACGTGAGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCCAGTC 51401 Query 117750 GTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 || |||||| ||||||| ||| | || || || ||||| Sbjct 51400 GTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCA 51362 >seq1589 Length=144912 Score = 107 bits (118), Expect = 2e-18 Identities = 593/933 (64%), Gaps = 23/933 (2%) Strand=Plus/Minus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || ||||||| ||||| | ||||| || || |||||| | | |||||||| | Sbjct 47466 GGGAGGGCGAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATG 47407 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || || | |||||| || || |||||||| ||||| ||||| ||||| | Sbjct 47406 ATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTGCCG 47347 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||| || ||||||||||| ||||| ||||| || ||||| ||||| | || ||| || Sbjct 47346 TTGGCAGCGTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGATG 47287 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACT 106694 || | ||| | | || | || | || | | | ||| | ||||| |||||| Sbjct 47286 GCGTACCAGAGCTTCTG-AGCGCGGACTGTCTC-ACGACCCTTGCCCTCACGCTCGTATC 47229 Query 106695 TTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTG 106754 ||| || | || ||||| | || | || | ||||| || || || | Sbjct 47228 GCTCGTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAG 47169 Query 106755 GACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC 106814 | || | | || ||| || |||||| ||||||||||| || || || | || Sbjct 47168 GGCACATCAAAGTCCAAGTGGTGTTCTGCTCAACACGCTTCATGAACAGATCAGGCACCC 47109 Query 106815 ACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACT 106874 | || | || | ||| | ||| |||| || | || ||||| || | | Sbjct 47108 AGAGACCGTAGAACAAATCGCGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGAT 47049 Query 106875 CAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATC 106928 | | ||| | || ||| |||||||||||||| | || | |||| || || Sbjct 47048 CCAAGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCGAAAGCACCAGGTC 46989 Query 106929 CCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 106987 ||| | | ||||| || | || ||||| || ||| |||||| || || ||||| Sbjct 46988 GCTTGTTGCCGCCC----TGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATG 46933 Query 106988 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 107047 || | | ||| | ||| || ||||| || | || | | | | || | | Sbjct 46932 GGTACGAGACCGTTGGATGTTCCGTTTGTACCGCTGATGTATGCTCCAGTCGCGCGGATG 46873 Query 107048 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAA 107105 || | || | || || || ||||| ||| ||||| | ||||| || || Sbjct 46872 CGGTGAACGTTGAGTCCGATGCCGCCAGCGTTCTTGGAGATCATGGCGCA-GGTCTTCAA 46814 Query 107106 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 107165 | || | ||||| || | || ||| ||||| || |||| |||||||| | || Sbjct 46813 G-GTGTCGTAGATGCCATCAATGCTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCA 46755 Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT- 107224 ||| | | ||||| || || |||| || || || | || || |||| ||| | Sbjct 46754 GCTGAGCGTTGGGTGTTCCGGCGCTGAACAGCGTAGGCGAAGCATGTGTGAA-GTACTTG 46696 Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284 | ||||| | || ||| ||||| | | |||| |||||||| || ||||||||||| | Sbjct 46695 TTCGACATGTAGTTGTAGGTCTCAATGGCAGACTCAATGTCATCACCGTGGATGCCAACA 46636 Query 107285 GCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA 107344 || |||||||| | ||| | ||| ||| | || | |||| | || || |||| Sbjct 46635 GCAACACGCATGATCATCTGTTGTGGTCTCTCGGCAACCTTGCCGTTGATCCTCAGAAGG 46576 Query 107345 TA-GCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 || | || |||| || || |||| |||||||| Sbjct 46575 TATGATC-TCTCCAGCGTCTTGAATCCAAAGTA 46544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589953712506520