Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 132 6e-26
seq1589 107 2e-18
>seq1655
Length=66175
Score = 132 bits (146), Expect = 6e-26
Identities = 531/819 (65%), Gaps = 29/819 (4%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| || || |||||||| ||||||||||| || || | ||| ||||| ||||||
Sbjct 52167 TAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTGCCTCCGAGGGAGATGTTCTCCATA 52108
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100
||||| || || || | ||||| | ||| || || | | |||||
Sbjct 52107 AAGTCGAAGGGGTTTGTGGCGTTGTAGTGCTTCTGGTTG-----CCGAGTGCCAGGAGGA 52053
Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160
|||| || | || |||| ||||||| | |||| || | |||||| |||| |||
Sbjct 52052 GACGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCG 51993
Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220
||||||||| ||||| || ||| | | ||| || |||| ||||| | | ||||
Sbjct 51992 CACATGGGAGGGCGTCTGTGAGAAACTCCTGCTCGATGACAACGGCCTCGGTGATGATGT 51933
Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACG---GCAA 117277
| | | | | | | | || | || | || | | ||| | || | || |
Sbjct 51932 CTTCAACAACCTGGTTTGATGGCTTGTT--GTTGAGG-TGGGAGAACAGCAGGCAGGCGA 51876
Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337
| || ||| | ||||| || ||||| || || || || |||||| ||||| ||||
Sbjct 51875 AGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCA 51816
Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCC 117396
||||||| |||||||||||||| | || | ||| |||||| |||||||||||||| |||
Sbjct 51815 TGAGACCACGCTTCTTCAACCAGAAGATGGACGC-GAATGATCCGGAGAAGAAGATGCCC 51757
Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCA 117455
|| | ||||| || | || || ||| |||| |||| |||| | | |||
Sbjct 51756 TCGATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGG-TCGAGTTCTTGTCGGAGATCCA 51698
Query 117456 TTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAA 117515
| || ||||| | |||||||| || ||||| | | | |||||| | || |
Sbjct 51697 TCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAGAG 51638
Query 117516 CTGC-TTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGC 117574
| | | | || | | || | |||||| | || || | || ||||| |||
Sbjct 51637 GTACGTGCGTTGCTTGGGC-TCGCTGATGTATGTATCGATGAGGAGGGAGTATGTCTCGG 51579
Query 117575 CATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGC 117633
|| | | | ||| || | ||| | ||||||| |||| || ||| ||||||
Sbjct 51578 AGTGGATGTTCTCCATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGC 51520
Query 117634 ACTTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 117692
|| || ||| | || | | | ||| |||||| || ||||||||||| |||| ||
Sbjct 51519 ACCTC-TCCACTGAAGCGCTCAATGAGGTTCTCATTGACGATTCCATCGGAGGCAGCGAA 51461
Query 117693 GAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAGG---GTCTTCCAGTC 117749
||| ||||||| || ||||| || | || || ||| | ||||||||
Sbjct 51460 GAAGGCCAGGACGTGAGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCCAGTC 51401
Query 117750 GTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788
|| |||||| ||||||| ||| | || || || |||||
Sbjct 51400 GTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCA 51362
>seq1589
Length=144912
Score = 107 bits (118), Expect = 2e-18
Identities = 593/933 (64%), Gaps = 23/933 (2%)
Strand=Plus/Minus
Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516
|| ||||||| ||||| | ||||| || || |||||| | | |||||||| |
Sbjct 47466 GGGAGGGCGAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATG 47407
Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576
|| || || || | |||||| || || |||||||| ||||| ||||| ||||| |
Sbjct 47406 ATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTGCCG 47347
Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636
||| || ||||||||||| ||||| ||||| || ||||| ||||| | || ||| ||
Sbjct 47346 TTGGCAGCGTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGATG 47287
Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACT 106694
|| | ||| | | || | || | || | | | ||| | ||||| ||||||
Sbjct 47286 GCGTACCAGAGCTTCTG-AGCGCGGACTGTCTC-ACGACCCTTGCCCTCACGCTCGTATC 47229
Query 106695 TTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTG 106754
||| || | || ||||| | || | || | ||||| || || || |
Sbjct 47228 GCTCGTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAG 47169
Query 106755 GACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC 106814
| || | | || ||| || |||||| ||||||||||| || || || | ||
Sbjct 47168 GGCACATCAAAGTCCAAGTGGTGTTCTGCTCAACACGCTTCATGAACAGATCAGGCACCC 47109
Query 106815 ACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACT 106874
| || | || | ||| | ||| |||| || | || ||||| || | |
Sbjct 47108 AGAGACCGTAGAACAAATCGCGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGAT 47049
Query 106875 CAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATC 106928
| | ||| | || ||| |||||||||||||| | || | |||| || ||
Sbjct 47048 CCAAGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCGAAAGCACCAGGTC 46989
Query 106929 CCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 106987
||| | | ||||| || | || ||||| || ||| |||||| || || |||||
Sbjct 46988 GCTTGTTGCCGCCC----TGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATG 46933
Query 106988 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 107047
|| | | ||| | ||| || ||||| || | || | | | | || | |
Sbjct 46932 GGTACGAGACCGTTGGATGTTCCGTTTGTACCGCTGATGTATGCTCCAGTCGCGCGGATG 46873
Query 107048 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAA 107105
|| | || | || || || ||||| ||| ||||| | ||||| || ||
Sbjct 46872 CGGTGAACGTTGAGTCCGATGCCGCCAGCGTTCTTGGAGATCATGGCGCA-GGTCTTCAA 46814
Query 107106 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 107165
| || | ||||| || | || ||| ||||| || |||| |||||||| | ||
Sbjct 46813 G-GTGTCGTAGATGCCATCAATGCTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCA 46755
Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT- 107224
||| | | ||||| || || |||| || || || | || || |||| ||| |
Sbjct 46754 GCTGAGCGTTGGGTGTTCCGGCGCTGAACAGCGTAGGCGAAGCATGTGTGAA-GTACTTG 46696
Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284
| ||||| | || ||| ||||| | | |||| |||||||| || ||||||||||| |
Sbjct 46695 TTCGACATGTAGTTGTAGGTCTCAATGGCAGACTCAATGTCATCACCGTGGATGCCAACA 46636
Query 107285 GCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA 107344
|| |||||||| | ||| | ||| ||| | || | |||| | || || ||||
Sbjct 46635 GCAACACGCATGATCATCTGTTGTGGTCTCTCGGCAACCTTGCCGTTGATCCTCAGAAGG 46576
Query 107345 TA-GCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376
|| | || |||| || || |||| ||||||||
Sbjct 46575 TATGATC-TCTCCAGCGTCTTGAATCCAAAGTA 46544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589953712506520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |