Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3230 82.4 5e-11 >seq3230 Length=199858 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||||| || ||||||||||| || || ||||| | || | || || Sbjct 170765 ACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGTGTCCGGCCGTCCTCA 170706 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || || || || | || | || |||||||| | Sbjct 170705 AGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGGGATTCCTTCCTTGTCTTGA 170646 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||||| || | || || || || Sbjct 170645 ATCTTGGACTTGACGTTGTCGATCGTGTCTGATGATTCAACTTCCAGTGTGATCGTCTTG 170586 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| || || || |||||| Sbjct 170585 CCGGTGAGTGTCTTGACGAATATTTGCATA 170556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324619067878344