Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq3230 98.7 8e-16 >seq3230 Length=199858 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || |||||||| || ||||| ||||||||||| || | || Sbjct 170774 AGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGTGTCCGG 170715 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| ||||| || || || ||||||||||||| || | || ||| Sbjct 170714 CCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGGGATTCCTTCC 170655 Query 48669 TTGTCGCTAATCTT 48682 ||||| |||||| Sbjct 170654 TTGTCTTGAATCTT 170641 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || || || ||||| || || || | ||| |||| || | ||||| ||||| || Sbjct 170519 TCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAG 170460 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| ||||||||| |||| ||||| |||||||||||| ||||| || ||| Sbjct 170459 ATCAATCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTAACATTG 170400 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || |||| ||||||||||| || ||||| || || || | || || || Sbjct 170399 TCGATGGTGTCCGACGACTCCACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCTTGACG 170340 Query 48756 AAAATCTGCAT 48766 || |||||||| Sbjct 170339 AAGATCTGCAT 170329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380920547447379