Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1655 286 6e-72 seq1589 266 6e-66 >seq1655 Length=66175 Score = 286 bits (316), Expect = 6e-72 Identities = 582/851 (68%), Gaps = 30/851 (4%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| || || | ||||| |||||||| || || || | | |||||||||||| Sbjct 52170 TGGTAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTGCCTCCGAGGGAGATGTTCTCC 52111 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTG--TCAGG---CCCATCTGTTCCA 47954 || ||| ||||||||| | | ||| || ||| || || || | || ||| Sbjct 52110 ATAAAGTCGAAGGGGTTTGTGGCGTTGTA-----GTGCTTCTGGTTGCCGA---GTGCCA 52059 Query 47955 GCAGGTGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTA 48011 | ||| || || |||||| |||||||||| | ||||||| || |||||| || | Sbjct 52058 GGAGGAGACGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATTCCGA 51999 Query 48012 TGAGGG-ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCC 48070 ||| | ||| ||| | || | |||||||||||||| ||| || ||||| || Sbjct 51998 GGAGCGCACATGGG-AGGGCGTCTGTGAGAAACTCCTGCTCGATGACAACGGCCTCGGTG 51940 Query 48071 ACAATCTGCTTAACG--CGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCA 48128 | || | | ||| | || | ||| || |||||| ||||| || | |||| Sbjct 51939 ATGATGTCTTCAACAACCTGG--TTTGATGGCTTGTTGTTGAGGTG---GGAGAACAGCA 51885 Query 48129 TGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGA 48188 |||||| ||||| |||||| ||| ||||| ||| ||||||| ||||||||||| || Sbjct 51884 GGCAGGCGAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGA 51825 Query 48189 GACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGA 48248 | || ||||||| || | || || | |||||| || | |||||| || || ||||||| Sbjct 51824 GGCCGGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCGGAGAAGA 51765 Query 48249 AGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTG 48308 |||||||||| | || || || ||| |||| | | || | | ||||||||| | Sbjct 51764 AGATGCCCTCGATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTCGAGTTCTTGTCGG 51705 Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368 ||||||| ||||||||||| |||||||| ||||||||| || | || ||||| Sbjct 51704 AGATCCATCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGT 51645 Query 48369 GGAAGAGCTTCTTGCACTCACCTGCGTCCGC-AACATAGGTAGTGAGCAGCTTTGCGTAC 48427 |||||| | | ||| | | || | ||| | || ||| || || | ||| Sbjct 51644 TGAAGAGGTACGTGC-GTTGCTTGGGCTCGCTGATGTATGTATCGATGAGGAGGGAGTAT 51586 Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487 |||| ||||| | ||||| || ||| ||||| ||||||||| | |||||| Sbjct 51585 GTCTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCGGGG 51526 Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547 | |||||| ||| ||| | ||| | || ||||||||||| || ||||| || ||| Sbjct 51525 ATCTGCACCTCTCCACTGAAGCGCTCAATGAGGTTCTCATTGACGATTCCATCGGAGGCA 51466 Query 48548 GCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA-GAGC--ATTC 48604 || |||||||| ||||| || | ||| |||||||| || | ||| | || ||| Sbjct 51465 GCGAAGAAGGCCAGGACGTGAGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTC 51406 Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664 ||| | || | || ||| ||| || | || || | |||||||| || || || Sbjct 51405 CAGTCGTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCC 51346 Query 48665 TTTTTGTACAT 48675 || |||||||| Sbjct 51345 TTCTTGTACAT 51335 >seq1589 Length=144912 Score = 266 bits (294), Expect = 6e-66 Identities = 1205/1885 (64%), Gaps = 94/1885 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || ||| || ||| | ||||| || ||||||||||| ||||| Sbjct 48369 ACGGTGAACTGAATGGGCGCAGACGCCGCCATTGTGCGAAGGTAGTACATGCCAGTCTTC 48310 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 ||||| ||| ||||||| | |||||| |||| ||| |||| | || | Sbjct 48309 AGGCCGAGCTT---CCAGCCGGCGAAGTGCAT-GCTGGTGA---TCTTGCCC---ATCGT 48260 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 | | || | | |||| | ||||||| |||| ||| || ||||||| | Sbjct 48259 CGGCTCCTTCATGTGG---------ATGTTCAGGCTCTGAGACTGATCGATGAATGCACC 48209 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | |||||||| ||| | | ||| | | |||| || |||||| || |||||| | | Sbjct 48208 ACGGTCAGCGGACATCTGGACGATGTGACGCTGGCTGATCTCCCAGACAGTCTTGTACAA 48149 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAG 212848 | |||||||| || || | | || ||| ||| | || || | || | | | Sbjct 48148 AGCCTTGAGGTCGTCAGGAATGTTTGGAATGCGCTGAATGGAACCACC----ATCGGC-G 48094 Query 212849 CTGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCT-CCAGGCACTTGACCA 212901 || | ||| ||||| || ||| ||||| | | || ||| | ||||| || Sbjct 48093 ATG-ATGCGGTTCTTCATGTTGTCTGACCACAGGCCAC-GCTCAACCAAGTCCTTGAGCA 48036 Query 212902 GGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAG 212961 |||||||| | |||||| || || | |||||| | | ||| | ||| | Sbjct 48035 ACCATGGGTTGACAACCTGGAACTCGCCAGCGAGCACACGACGGGAGTAGATGTTGCTGG 47976 Query 212962 TGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGG 213021 |||| ||||||| || ||||||| |||| ||||| | ||| || || ||||||| Sbjct 47975 TGTATGGCTCGAAGCACTCGTTGAAACCCATGATCTGCGAGGTGGATGCAGTCGGCATGG 47916 Query 213022 GAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCC 213081 |||| || ||||| ||| | || ||||||||| |||| | | || | |||| Sbjct 47915 GAGCGACGAGGAGCGAGTTGCGAACACCGTGCTCGGCGATCTTGGCCTTGAGTGCGGCCC 47856 Query 213082 AGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGAT-G 213140 ||||||| || || | |||| ||||||||| |||| ||| | | Sbjct 47855 AGTCCCAG---------AGATCAGTGGGAGTCACACCCCACATGTCGTACTG-AAGCTCG 47806 Query 213141 CCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 || ||| ||||| ||||| ||| | ||| || ||| ||| || || ||| Sbjct 47805 CCCTTGGAAACGGGAGAGCCCTCGTATGTCTCGTATGGTCCAAGCTTAGCAGCGAGATCG 47746 Query 213201 CAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260 || || || || ||||||| |||||||| || || |||| ||||||||| Sbjct 47745 CATGAAGCGGTGAGAGCAGCGTGATAGATGGTCTCGAAGATCTGAATGTTGAGCTGGCGA 47686 Query 213261 GCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACC 213320 ||||| || || ||| ||||| || ||| |||| || || || | ||| Sbjct 47685 GCCTCAGGAGAGTCGAAAGGCATGCGCAGAGCCAAGAAAGCATCGGCAAGACCGTTGACA 47626 Query 213321 CCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAA 213379 |||| |||||||| | ||| | | ||| |||| |||| ||| || ||||| Sbjct 47625 CCGAGACCGATGGGACGGTGACGGAAGTTGCTCTTGCGAGC-CTCTGGCACTGGGTAGTG 47567 Query 213380 GTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTA 213439 |||| |||||||||||||| | ||| |||| | || ||||| ||| || Sbjct 47566 GTTGACCTCGATGATCTTGTTCAAGTTCTTGGTGACGGTTTGAGTGACCTGGTGGAG--- 47510 Query 213440 CTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCA---------GGCAGGGCGAT 213490 || || | || || | | | ||| || ||| || || ||||||| Sbjct 47509 CTTGTCA---AAGTCGAAACGCTCGTTCT---CAATGTCGACGTAGGTGGGGAGGGCGAG 47456 Query 213491 GCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCA 213550 || |||||||| ||||| ||||| | || | |||||||| |||||||||||||| Sbjct 47455 AGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCGGTGCA 47396 Query 213551 CAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATC 213610 |||||| || |||||||| |||| ||||| ||||| ||| ||||||||| || Sbjct 47395 GAGGTTGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTGCCGTTGGCAGCGTC 47336 Query 213611 CTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAG 213670 ||||||||| ||||| || | |||||||| ||| | | | || || | |||||| Sbjct 47335 CTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCGTACCAGAG 47276 Query 213671 GTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGT-AGCCTCGTACTGTTCGTAGA 213729 | | || || | | || || | | | | | | |||||| | ||||| | Sbjct 47275 CTTCTGAGCGCGGA----CTGTCTCACGACCCTTGCCCTCACGCTCGTATCGCTCGTACA 47220 Query 213730 GCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACA-GGATGCGGGACACATG 213788 |||| | ||| || ||| |||| |||| || || || || ||| ||||| Sbjct 47219 GCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAGGG-CACATC 47161 Query 213789 AGGCTCC-AGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGC 213847 | ||| ||| || ||| || | || ||||||||| || || ||||| || | Sbjct 47160 AAAGTCCAAGTGGTGTTCTGCTC-AACACGCTTCATGAACAGATCAGGCACCCAGAGACC 47102 Query 213848 GGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAA 213907 | ||||| || | || | ||| ||| ||| ||| ||||| ||||| | || Sbjct 47101 GTAGAACAAATCGCGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAA 47042 Query 213908 GTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTT 213964 | |||| || |||||||| ||||| ||||| ||||| || || || | || | || Sbjct 47041 GGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCGAAAGCACCAGGTCGCTTGTT 46982 Query 213965 GCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCC 214024 |||||||||||| || | || |||| || | ||||| | |||||| || || Sbjct 46981 GCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAGACC 46922 Query 214025 GTTGGACTGTCCGTTGGTTCCCGCT-ATATACGAGCCGGAGGCCCTCAGGTTGCTCATGG 214083 |||||| |||||| | | ||||| || || | || | || | | | | | | Sbjct 46921 GTTGGATGTTCCGTTTG-TACCGCTGATGTATGCTCCAGTCGCGCGGATGCGGTGAACGT 46863 Query 214084 AGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGA 214143 ||| || ||||| || |||| ||||||||||||||||||| | ||| || || || Sbjct 46862 TGAGTCCGATGCCGCCAGCGTTCTTGGAGATCATGGCGCAGGTCTTCAAGGTGTCGTAGA 46803 Query 214144 TGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGG 214203 |||| | ||||||||||| | | || | | ||||||| | ||||| | ||| Sbjct 46802 TGCCATCAATGCTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGAGCGTTGG 46743 Query 214204 ACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCC 214263 | || | | |||| ||||| || ||||| | | ||||||| || | | Sbjct 46742 GTGTTCCGGCGCTGAACAGCGTAGGCGAAGCATGTGTGAAGTACTTGTTCGACATGTAGT 46683 Query 214264 TGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCA 214323 |||||||||| | | | || ||||| | |||||| | ||| | ||| | Sbjct 46682 TGTAGGTCTCAATGGCAGACTCAATGTCATCACCGTGGATGCCAACAGCAACACGCATGA 46623 Query 214324 GCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG------AGCAGGTAGGAGC 214377 ||| || || || ||||| | |||| ||| ||| || ||||| || | Sbjct 46622 TCATCTGTTGTGG--TCTCTCGGCAACCTT----GCCGTTGATCCTCAGAAGGTATGATC 46569 Query 214378 GCTCCAGAGTCTTGAACCCAAAGTA 214402 |||||| |||||||| |||||||| Sbjct 46568 TCTCCAGCGTCTTGAATCCAAAGTA 46544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931490031000320