Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 224 2e-53
seq1589 188 1e-42
>seq1655
Length=66175
Score = 224 bits (248), Expect = 2e-53
Identities = 568/861 (66%), Gaps = 30/861 (3%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | ||| |||||||||||| ||||| ||||||
Sbjct 51326 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATCGATCTG 51385
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594
||||||| | ||| |||| || | ||| ||||| ||| || ||| |
Sbjct 51386 TCCAAGGATCTTCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCTCT 51445
Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|||| |||| ||||| || ||||| ||||| || || || ||||| || ||| |
Sbjct 51446 CACGTCCTGGCCTTCTTCGCTGCCTCCGATGGAATCGTCAATGAGAACCTCATTGAGCGC 51505
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
|||| | || |||||| | |||||| || |||||||||||||| || ||
Sbjct 51506 TTCAGTGGAGAGGTGCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGATG 51565
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGTCGC 25772
|| || | ||||| ||| || || || | ||| || ||||| ||| || |
Sbjct 51566 GAGAACATCCACTCCGAGACATACTCCCTCCTCATCGAT-ACATACAT--CAG-CGAGCC 51621
Query 25773 CGAGAGA-GATCGG--CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829
| || | | || || || |||||||| |||| || ||||| | ||||||
Sbjct 51622 CAAGCAACGCACGTACCTCTTCAACGCCATCGACAACATCCCATGCATCCGTAAGAAGGC 51681
Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889
||||| || |||||| | | ||| | | || |||| | || || | ||
Sbjct 51682 TGACTGGGCGCTGCGATGGATCTCCGACAAGAACTCGACCTTTGCCTGCCGTCTCATCGC 51741
Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949
|||||| || | ||||||||||| ||| ||| || || ||| ||||||||||| | ||
Sbjct 51742 CTTTGCCGCCATCGAGGGCATCTTCTTCTCCGGATCATTCGCGTCCATCTTCTGGTTGAA 51801
Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009
| || || ||||||||| || ||| ||||||||||||||| | | ||||||||
Sbjct 51802 GAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGG 51861
Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCA 26069
| |||| || || ||||||||||| | | | |||| | | |||| || || |
Sbjct 51862 CATGCACACCGACTTCGCCTGCCTGCTGTTCTC---CCACCTCAACAACAAGCCATCAAA 51918
Query 26070 AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNN 26129
|| || | ||||||| ||||| || | |||||| |||||||||
Sbjct 51919 CCAGGTTGTTGAAGACATCATCACCGAGGCCGTTGTCATCGAGCAGGAGTTTCTCACAGA 51978
Query 26130 NNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTA 26189
| || |||||| || |||||| |||| ||||| ||||
Sbjct 51979 CGCCCTCCCATGTGCGCTCCTCGGAATGAACGCCAAGCTCATGTGCCAGTACATCGAGTT 52038
Query 26190 TGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCG----CCAGA--CTCTACAGTACGC- 26242
|| ||||||| ||| || |||| ||||| ||||| | ||||| ||||
Sbjct 52039 CGTCGCCGACCGTCT------CCTCCTGGCACTCGGCAACCAGAAGCACTACA--ACGCC 52090
Query 26243 -CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAA 26301
| ||||| |||||||||||||| ||||| || | | ||| || ||||||||||| ||
Sbjct 52091 ACAAACCCCTTCGACTTTATGGAGAACATCTCCCTCGGAGGCAAAACCAACTTCTTCGAG 52150
Query 26302 AAGAGGGTCGGCGACTATCAA 26322
||| | ||||||||||| |||
Sbjct 52151 AAGCGTGTCGGCGACTACCAA 52171
>seq1589
Length=144912
Score = 188 bits (208), Expect = 1e-42
Identities = 938/1465 (64%), Gaps = 59/1465 (4%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|| || |||||||| ||||||||||| |||||| ||||||| || | ||||| ||
Sbjct 47736 GTGAGAGCAGCGTGATAGATGGTCTCGAAGATCTGAATGTTGAG-CTGGCGAGCCTCAGG 47678
Query 221476 AGAAGTGAAGGGCATACGCAGCATCT-GAAAGACGTCGGCCAGTCCCTGTACTCCGATAC 221534
||| ||| ||||| ||||| | ||||| | ||||| || || | || |||| ||
Sbjct 47677 AGAGTCGAAAGGCATGCGCAGAGCCAAGAAAG-CATCGGCAAGACCGTTGACACCGAGAC 47619
Query 221535 CGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGT 221594
||||||| | ||| | |||| | || |||||||| || || |||||| |
Sbjct 47618 CGATGGGACGGTGACGGAAGTTGCTCTTGCGAGCCTCTGGCACTGGGTAGTGGTTGACCT 47559
Query 221595 CGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGAT 221654
|||| | ||||| | |||| |||| | || | |||| | ||||| || |
Sbjct 47558 CGATGATCTTGTTCAAGTTCTTGGTGACGGTTTGAGTGACCTGGTGGAGCTT---GTCA- 47503
Query 221655 TGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGG 221714
|| | || ||| ||| | | | || || | | | ||||| | |
Sbjct 47502 --AAGTCGAAA-CGCT--CGTTCTCAATG---TCGACGTAGGTGGGGAGGGCGAGAGATG 47451
Query 221715 CCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGT 221774
| ||||| |||||||| ||||| || || |||| |||||||| || |||||||
Sbjct 47450 CAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCGGTGCAGAGGT 47391
Query 221775 TGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGT 221834
|| || ||||||||||| || || || || ||||| ||||||||||||||||
Sbjct 47390 TGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTGCCGTTGGCAGCGTCCTTGT 47331
Query 221835 AGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTC 221894
|||| || | || ||| ||||| ||||||| | || || || |||||| | ||
Sbjct 47330 AGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCGTACCAGAGCT-TC 47272
Query 221895 TG-GCGCTCACCGTCCTCTTGAC---TGCACCCTCGGTCTTTTCATACCCGGTATAGAGC 221950
|| |||| || || ||| ||| ||| | | || || | || | || || |||
Sbjct 47271 TGAGCGCGGACTGT-CTCACGACCCTTGCCCTCACGCTCGTATC--GCTCG---TACAGC 47218
Query 221951 ATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGA 222010
|| |||| | ||||| | || |||| || || ||| | || ||||||| |
Sbjct 47217 TCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAGGGCACATCAAA 47158
Query 222011 CTCC-AGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTG 222069
||| |||| |||| | | || | || |||||| || || || | ||| || | |
Sbjct 47157 GTCCAAGTG-GTGTTCTGCTCAACACGCTTCATGAACAGATCAGGCACCCAGAGACCGTA 47099
Query 222070 AAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTC 222129
|| | ||| | || || ||||||| |||| ||| || | |||||||| ||
Sbjct 47098 GAACAAATCGCGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAAGGA 47039
Query 222130 AAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCC 222189
|| | || |||||||| ||||| | || | ||| | ||| || ||||||||||||||
Sbjct 47038 GAAGACATCTGCGTGCCATGGCTCGATGTACATGGCGAAAGCACCAGGTCGCTTGTTGCC 46979
Query 222190 ACCCTGATCCACCATCCTCTCCAGAG----CGTTGAAGATGCGAAGGGTCGGTACCAGTC 222245
||||| || | | | | || | ||| || | || || | ||||| || |
Sbjct 46978 GCCCTGGTCGA----CGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAGAC 46923
Query 222246 CGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG 222305
|||||||| ||||| || || | ||||| || || || | || | | | |
Sbjct 46922 CGTTGGATGTTCCGTTTGTACCGCTGATGTATGCTCCAGTCGCGC---GGATGCGGTGAA 46866
Query 222306 ACATG---CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362
|| ||||| || || |||| || ||||||||||||||| |||| | |||||
Sbjct 46865 CGTTGAGTCCGATGCCGCCAGCGTTCTTGGAGATCATGGCGCAGGTCTTCAAGGTGTCGT 46806
Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422
|||||| || || ||| ||||| | || | || || || || | || ||||| |
Sbjct 46805 AGATGCCATCAATGCTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGAGCGT 46746
Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482
||| | | |||| | |||||||| || || ||||| ||||| | |||||
Sbjct 46745 TGGGTGTTCCGGCGCTGAACAGCGTAGGCGAAGCATGTGTGAAGTACTTGTTCGACATGT 46686
Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCA 222542
| ||| ||||| | | | | |||| || ||||| || | || | ||
Sbjct 46685 AGTTGTAGGTCTCAATGGCAGACTCAATGTCATCACCGTGGATGCCAACAGCAACACGCA 46626
Query 222543 TGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAGCTG---GAGAGCAGGTACGATT 222599
|| ||| | || || |||| | | | ||||| | || || ||||| |||
Sbjct 46625 TGATCATCTGTTGTGGTCTCT---CGGCAACCTTGCCGTTGATCCTCAGAAGGTATGATC 46569
Query 222600 TTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGG 222659
| ||||| |||||||| |||||||| | | || ||||| | ||| ||| | |||
Sbjct 46568 TCTCCAGCGTCTTGAATCCAAAGTATTGGTAGTTGAAGTCACGATCGTAAACGATAGCGC 46509
Query 222660 CGTCCAGCTCCGACTT--GTGCTTTACGCTCAACTCGAAAAAG--CGCTCAGACACGAGG 222715
|| ||||| | || || ||| ||| | ||| | | | ||| || | | |
Sbjct 46508 TGTTGAGCTC--ATTTGCGTTCTTGACGACC--GTCGCATATGTCTCCTCGGAGATCATG 46453
Query 222716 GGAGCGTTCTCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAG 222775
|| || |||| | ||| | ||||| | || || ||| || | | | || | |||
Sbjct 46452 GGTGCCTTCTTTCCGGTCTTTGGGTTGATGTAGTTGTAAAGGTCCTCGACAACAGCGGAG 46393
Query 222776 AAC-GTGTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACC 222834
||| | || | ||||||||||| || || || |||||||| || | || | ||| |
Sbjct 46392 AACTGCTTCTTG-GTCTGCTTGTGGAGGTTGGAGACGGCGATGCGTGCGGCGAGGATGGC 46334
Query 222835 ATAGTCAGGGTGCACGGTGGTCATG 222859
||||| ||||| | |||||||
Sbjct 46333 GTAGTCGGGGTGGGTGACGGTCATG 46309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928802154413120
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