Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1655 132 6e-26 >seq1655 Length=66175 Score = 132 bits (146), Expect = 6e-26 Identities = 531/819 (65%), Gaps = 29/819 (4%) Strand=Plus/Plus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGAC---CCTGAAT 64770 ||||| || || || | ||| ||||||| |||||| |||||||||| | ||| || Sbjct 51362 TGGACCGCCGAGGAGATCGATCTGTCCAAGGATCTTCACGACTGGAACAAGCGCCTCAAC 51421 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 || | || ||||| || ||||||| ||||| |||| ||||||||||| Sbjct 51422 GACGACGAGCGCTTCTTCATCTCTCACGTCCTGGCCTTCTTCGCTGCCTCCGATGGAATC 51481 Query 64831 GTTTTTGAGAATATCAATAA-CAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889 || |||||| ||| | | | || | ||| || |||||||| ||| || |||| Sbjct 51482 GTCAATGAGAACCTCATTGAGCGCTTCAGTGGA-GAGGTGCAGATCCCCGAGGCCCGCTG 51540 Query 64890 ATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGA 64948 ||||||| | ||| | || ||| | | | || ||| ||||| || | | Sbjct 51541 CTTCTACGGTTTCCAAATC-ATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCA 51599 Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAAGAA-GCAGTTATTTGAAGCCATCCAAACT 65007 | || | |||||| | || | | || | | | | | || | |||||| | | Sbjct 51600 TCGATACATACATCAGCGA-GCCCAAGCAACGCACGTACCTCTTCAACGCCATCGACAAC 51658 Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCG 65066 | ||||| || |||||||| | ||||| || |||| | | |||| |||| Sbjct 51659 ATCCCATGCATCCGTAAGAAGGCTGACTGGGCGCTGCGATGGATCTCCGACAAGAACTCG 51718 Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 |||| ||| || || | || ||||| | ||||| |||||||||||||| || Sbjct 51719 A-CCTTTGCCTGCCGTCTCATCGCCTTTGCCGCCATCGAGGGCATCTTCTTCTCCGGATC 51777 Query 65127 ATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAA 65185 |||| ||| | || | |||||||||||||| ||||||||||| ||||| |||||| | Sbjct 51778 ATTC-GCGTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCA 51836 Query 65186 ATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC---CGTGGAGCTCTTCA 65242 | || || || ||||| || ||||| | ||| || || || | || | ||| | Sbjct 51837 ACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTCGCCTGCCTGCTGTTCTCCC 51896 Query 65243 AGACTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTG 65302 | || | || | || | | | | | | | | |||| | | ||||| |||| Sbjct 51897 A-CCTCAAC--AACAAGCCATCAAACCAGGTTGTTGAAGACATCATCACCGAGGCCGTTG 51953 Query 65303 AGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTG 65362 || ||| | | ||| || ||||| ||||||||| ||| |||| |||||| | Sbjct 51954 TCATCGAGCAGGAGTTTCTCACAGACGCCCTCCCATGTGCGCTCCTCGGAATGAACGCCA 52013 Query 65363 AGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGC 65422 || |||| | ||||||| |||| || | || ||||||||| | | || Sbjct 52014 AGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGTCTCCTCCTGGCACTCGG----- 52068 Query 65423 CACCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGA 65477 || ||| | ||||| | || || || ||||||||||| ||||| ||| | Sbjct 52069 CAACCAGAAGCACTACAACGCCACAAACCCCTTCGACTTTATGGAGAACATCTCCCTCGG 52128 Query 65478 TGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 || || ||||||||||| |||||||| || || ||||| Sbjct 52129 AGGCAAAACCAACTTCTTCGAGAAGCGTGTCGGCGACTA 52167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596542209998240