Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 132 6e-26
>seq1655
Length=66175
Score = 132 bits (146), Expect = 6e-26
Identities = 531/819 (65%), Gaps = 29/819 (4%)
Strand=Plus/Plus
Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGAC---CCTGAAT 64770
||||| || || || | ||| ||||||| |||||| |||||||||| | ||| ||
Sbjct 51362 TGGACCGCCGAGGAGATCGATCTGTCCAAGGATCTTCACGACTGGAACAAGCGCCTCAAC 51421
Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830
|| | || ||||| || ||||||| ||||| |||| |||||||||||
Sbjct 51422 GACGACGAGCGCTTCTTCATCTCTCACGTCCTGGCCTTCTTCGCTGCCTCCGATGGAATC 51481
Query 64831 GTTTTTGAGAATATCAATAA-CAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889
|| |||||| ||| | | | || | ||| || |||||||| ||| || ||||
Sbjct 51482 GTCAATGAGAACCTCATTGAGCGCTTCAGTGGA-GAGGTGCAGATCCCCGAGGCCCGCTG 51540
Query 64890 ATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGA 64948
||||||| | ||| | || ||| | | | || ||| ||||| || | |
Sbjct 51541 CTTCTACGGTTTCCAAATC-ATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCA 51599
Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAAGAA-GCAGTTATTTGAAGCCATCCAAACT 65007
| || | |||||| | || | | || | | | | | || | |||||| | |
Sbjct 51600 TCGATACATACATCAGCGA-GCCCAAGCAACGCACGTACCTCTTCAACGCCATCGACAAC 51658
Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCG 65066
| ||||| || |||||||| | ||||| || |||| | | |||| ||||
Sbjct 51659 ATCCCATGCATCCGTAAGAAGGCTGACTGGGCGCTGCGATGGATCTCCGACAAGAACTCG 51718
Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126
|||| ||| || || | || ||||| | ||||| |||||||||||||| ||
Sbjct 51719 A-CCTTTGCCTGCCGTCTCATCGCCTTTGCCGCCATCGAGGGCATCTTCTTCTCCGGATC 51777
Query 65127 ATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAA 65185
|||| ||| | || | |||||||||||||| ||||||||||| ||||| |||||| |
Sbjct 51778 ATTC-GCGTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCA 51836
Query 65186 ATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC---CGTGGAGCTCTTCA 65242
| || || || ||||| || ||||| | ||| || || || | || | ||| |
Sbjct 51837 ACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTCGCCTGCCTGCTGTTCTCCC 51896
Query 65243 AGACTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTG 65302
| || | || | || | | | | | | | | |||| | | ||||| ||||
Sbjct 51897 A-CCTCAAC--AACAAGCCATCAAACCAGGTTGTTGAAGACATCATCACCGAGGCCGTTG 51953
Query 65303 AGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTG 65362
|| ||| | | ||| || ||||| ||||||||| ||| |||| |||||| |
Sbjct 51954 TCATCGAGCAGGAGTTTCTCACAGACGCCCTCCCATGTGCGCTCCTCGGAATGAACGCCA 52013
Query 65363 AGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGC 65422
|| |||| | ||||||| |||| || | || ||||||||| | | ||
Sbjct 52014 AGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGTCTCCTCCTGGCACTCGG----- 52068
Query 65423 CACCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGA 65477
|| ||| | ||||| | || || || ||||||||||| ||||| ||| |
Sbjct 52069 CAACCAGAAGCACTACAACGCCACAAACCCCTTCGACTTTATGGAGAACATCTCCCTCGG 52128
Query 65478 TGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
|| || ||||||||||| |||||||| || || |||||
Sbjct 52129 AGGCAAAACCAACTTCTTCGAGAAGCGTGTCGGCGACTA 52167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596542209998240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |