Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq2722 255 8e-63
seq3230 161 1e-34
seq2882 129 8e-25
seq2320 93.3 6e-14
seq795 87.8 2e-12
>seq2722
Length=207625
Score = 255 bits (282), Expect = 8e-63
Identities = 478/700 (68%), Gaps = 7/700 (1%)
Strand=Plus/Plus
Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349
||| | | ||| || |||||||| || || || || ||||||||||| || | | |
Sbjct 120167 ATGGCACCAGCAATCGGTATCGACTTGGGTACGACCTACTCATGTGTGGGCATCTACAGA 120226
Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409
|||| || | ||||| ||| | || ||||| || ||||| ||||| || |||| |||
Sbjct 120227 GATGACCGCATTGAGATCATCGCCAACGACCAGGGTAACCGCACAACACCCTCGTTCGTC 120286
Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469
||||| || || | || || ||| | || || ||||||| ||||| || ||||||
Sbjct 120287 GCCTTCACCGACACCGAGCGCCTCATCGGTGACTCCGCAAAGAATCAAGTCGCCATGAAC 120346
Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529
|| |||| || ||||| ||||| ||||| || || || || ||||| ||| |
Sbjct 120347 CCAGTCAACACAGTCTTCGACGCCAAGCGCCTGATCGGCCGGAAGTTCGACGATGCTGAG 120406
Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTC--CCGGTGTGGCTGATAAGC 195587
|| || | ||| || ||| | | | | | ||| | || | | ||||| ||||
Sbjct 120407 GTGCAGGCCGACATGAAGCATTTCCCCT-TCAAGGTCATCAACAAGGGTGGC----AAGC 120461
Query 195588 CTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGT 195647
| || | | || || || | || ||| |||| || || | || || || || || |
Sbjct 120462 CGGTGGTACAAGTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCAT 120521
Query 195648 CTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAG 195707
| ||||| | | |||||| ||||||||||| | | | | ||| || || ||
Sbjct 120522 CAATGGTCCTCACCAAGATGCGCGAGACTGCGGAGGCATACCTTGGTGGCACAGTCAACA 120581
Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767
|||| || || ||||| || || ||||||| || || || || || ||||| ||||| |
Sbjct 120582 ATGCTGTCGTCACTGTCCCAGCATACTTCAACGACTCTCAGCGCCAAGCGACCAAGGATG 120641
Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAA 195827
||| | || || || || ||| || | || ||||| || || || || |||||||
Sbjct 120642 CTGGTCTCATCGCCGGCCTGAACGTCCTGCGCATCATCAACGAGCCTACCGCCGCTGCAA 120701
Query 195828 TTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCG 195887
|||| || ||||| |||||||| | || | || || || | ||||| || | |
Sbjct 120702 TTGCCTACGGTCTCGACAAGAAGACCGAGGGCGAGCGCAACGTGCTCATCTTCGACTTGG 120761
Query 195888 GTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGG 195947
|||||||||| |||||||| || ||||| | || || | || || ||||| || |||
Sbjct 120762 GTGGTGGTACCTTTGATGTTTCTCTTCTTACCATCGAGGAGGGCATCTTCGAGGTCAAGT 120821
Query 195948 CTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
| |||||||| ||||| || | ||||| || || |||||
Sbjct 120822 CCACTGCTGGAGATACCCACTTGGGTGGCGAGGACTTCGA 120861
Score = 210 bits (232), Expect = 3e-49
Identities = 543/825 (66%), Gaps = 13/825 (2%)
Strand=Plus/Plus
Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120
|| || || || || | || || || || || || || |||||||||||||| | ||
Sbjct 120990 GCCCTCCGCCGTCTGCGCACCGCTTGCGAGCGCGCGAAGCGAACTCTCTCTTCCTCCGCA 121049
Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180
|| || | ||||| || ||| | | || || | |||||||| || | || |||
Sbjct 121050 CAGACCTCCATCGAGATCGACTCGCTCTACGAGGGTGTCGACTTCTACACCTCCATCACC 121109
Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240
||||| || || || ||| | | || | || | ||||| || || ||
Sbjct 121110 CGTGCCCGCTTCGAGGAGCTGTGCCAGGACCTCTTCCGCTCCACCATGGAGCCCGTCGAG 121169
Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300
| || || ||||| ||||| || |||||| || | || || ||| | || ||
Sbjct 121170 CGCACTCTGCGCGACGCCAAGATCGACAAGTCTTCCGTCCACGAGATCGTCTTGGTCGGT 121229
Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360
||||| ||||||||||| ||| | || ||||| | || ||||||||| || ||
Sbjct 121230 GGATCCACCCGTATTCCCAAGGTCCAGAAGATGGTCTCCGACTTCTTCAACGGCAAGGAG 121289
Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420
|| | |||||||| || || || ||||| || ||||| ||||| ||||| ||
Sbjct 121290 CCCAATCGCTCTATCAACCCCGACGAGGCCGTTGCCTACGGTGCCGCCGTCCAGGCCGCC 121349
Query 196421 ATTCTCTCAGGTGTTGACAATAATAAC--GTCCA------AGATCTTCTGCTACTTGATG 196472
|||||||| |||| ||| | | | ||||| ||||| ||||| || || |
Sbjct 121350 ATTCTCTCCGGTG---ACACTTCCAGCAAGTCCACCAACGAGATC--CTGCTCCTCGACG 121404
Query 196473 TTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATA 196532
| || || | || || ||| | || || || |||||||| |||||| | || |
Sbjct 121405 TCGCGCCGTTGTCTCTCGGTATCGAGACCGCTGGTGGTGTCATGACTCCTCTCATCAAGC 121464
Query 196533 GGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAAC 196592
| ||||| || || || || |||||| | ||| || || | ||||| || || |
Sbjct 121465 GTAACACCACCATCCCCACCAAGAAGTCCGAGACCTTCTCGACCTTCTCCGACAACCAGC 121524
Query 196593 CAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTAC 196652
| ||||| | || || || | || || || || |||| | ||||| ||| | ||
Sbjct 121525 CTGGTGTGCTCATCCAGGTTTTCGAGGGCGAGCGTGCCCGCACGAAGGACAACAACCTTA 121584
Query 196653 TTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATG 196712
| || | ||||| | || || || ||| |||| ||| | |||||||| ||||| | |
Sbjct 121585 TGGGCAAGTTCGAGCTCACTGGCATCCCACCTGCGCCCCGCGGTGTTCCTCAGATCGAGG 121644
Query 196713 TTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTG 196772
| ||||| | || || || || || | |||||| | ||| || |||| | |
Sbjct 121645 TCACTTTCGACCTTGATGCCAACGGTATCATGAACGTCTCCGCTCTCGAGAAGGGCACCG 121704
Query 196773 GCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTG 196832
|||| | | |||||||| || ||||| || ||||| || || || ||||||||||| |
Sbjct 121705 GCAAGACCAACAAGATTGTCATCACCAACGATAAGGGCCGCCTGTCCAAGGAGGAAATCG 121764
Query 196833 AACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877
| || ||| | || || || ||||||| ||| || || ||||
Sbjct 121765 AGCGCATGTTGGCTGAGGCCGAGAAGTACAAGGACGAGGATGAGG 121809
>seq3230
Length=199858
Score = 161 bits (178), Expect = 1e-34
Identities = 154/197 (78%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| |||||||||| || || || || || || || || || ||||| || || ||||| |
Sbjct 170552 GTGGTATGCAAATATTCGTCAAGACACTCACCGGCAAGACGATCACACTGGAAGTTGAAT 170611
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| |||||||| ||||| ||| |||| ||||||||||||| |||||||| || ||||| |
Sbjct 170612 CATCAGACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGAATCCCACCGG 170671
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
|||| || || || || || || || || |||||||| || || || || || ||||||
Sbjct 170672 ATCAACAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCTGATT 170731
Query 172037 ACAACGTTCAAAAGGAG 172053
||||| |||| ||||||
Sbjct 170732 ACAACATTCAGAAGGAG 170748
Score = 147 bits (162), Expect = 3e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
|||||||| || ||||| || ||||| ||||| || || || ||||| || | || |
Sbjct 170125 ACTGGAAAGACCATCACGCTTGAGGTCGAGTCCTCGGATACCATCGACAATGTGAAGAGC 170184
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
||||||||||| ||||| |||||||| || || ||||| || || || || || || ||
Sbjct 170185 AAGATTCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCCTCATCTTCGCCGGAAAG 170244
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
|||||||| ||||| || |||||| || |||||| | || |||||||| ||||| |||
Sbjct 170245 CAGCTTGAGGATGGGCGCACCCTCAGCGACTACAACATCCAGAAGGAGTCCACTCTCCAC 170304
Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089
| || || | || || ||||||
Sbjct 170305 TTGGTGCTCCGCCTCCGTGGTGGT 170328
>seq2882
Length=147932
Score = 129 bits (142), Expect = 8e-25
Identities = 137/181 (76%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930
|| || || ||||| || || || || |||||||||||||| |||||||| ||||| |||
Sbjct 6766 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCGTCCGACACCATC 6707
Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990
|| ||| |||| |||||| || |||||||| || || ||||| || || || ||| |
Sbjct 6706 GACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCAACAGCGATTG 6647
Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAG 172050
|| || || || || || || || ||||| || ||||| || |||||| | ||||||
Sbjct 6646 ATCTTCGCCGGAAAGCAACTCGAGGATGGCCGAACCCTGAGCGACTACAACATCCAAAAG 6587
Query 172051 G 172051
|
Sbjct 6586 G 6586
>seq2320
Length=314285
Score = 93.3 bits (102), Expect = 6e-14
Identities = 80/99 (81%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||| ||||| ||||| || || || || |||||||||||||| || |||||
Sbjct 232965 ATGCAGATCTTCGTGAAGACCCTAACGGGCAAGACGATCACCCTCGAGGTGGAATCGTCC 232906
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAG 171960
||||| ||||| || |||| |||||||||| | ||||
Sbjct 232905 GACACCATCGACAATGTCAAGTCCAAGATTCAGGGTAAG 232867
Score = 84.2 bits (92), Expect = 3e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 171954 AGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGA 172013
||| ||||||||||| ||||| || || || || || || || || || || || || ||
Sbjct 232793 AGACAAGGAAGGCATCCCACCGGACCAACAGCGCCTGATCTTCGCCGGCAAGCAACTCGA 232734
Query 172014 AGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
||||| || ||||| | || |||||| | || |||||||| || || ||| | || ||
Sbjct 232733 GGATGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTCCT 232674
Query 172074 AAGGCTTCGGGGTGGT 172089
| || || ||||||
Sbjct 232673 CCGCCTCCGTGGTGGT 232658
>seq795
Length=24247
Score = 87.8 bits (96), Expect = 2e-12
Identities = 125/175 (71%), Gaps = 6/175 (3%)
Strand=Plus/Minus
Query 196260 AGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGA 196319
|||| || ||| |||||||| || || || ||||| || || || |||||||||||
Sbjct 3514 AGATCGAGAAGAGCAAGGTTGACGAGATCGTGCTTGTTGGTGGTTCTACCCGTATTCCCC 3455
Query 196320 AGATTCAACAGATGCTTTCTAGC---TTCTTCAATAATAAAGATTTAAACAAAACGATCA 196376
||| ||||| ||| ||| |||||||| || | | | || | ||||
Sbjct 3454 GGAT---ACAGAAGCTCCTCAGCGATTTCTTCAACGGCAAGAAGCTCGAGAAGAGCATCA 3398
Query 196377 ACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431
|||| ||||| || ||||| || ||||| ||||| ||||||| ||||||||| ||
Sbjct 3397 ACCCTGATGAGGCCGTTGCCTACGGTGCCGCCGTCCAGGCTGGTATTCTCTCCGG 3343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657832195892560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |