Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2722 255 8e-63 seq3230 161 1e-34 seq2882 129 8e-25 seq2320 93.3 6e-14 seq795 87.8 2e-12 >seq2722 Length=207625 Score = 255 bits (282), Expect = 8e-63 Identities = 478/700 (68%), Gaps = 7/700 (1%) Strand=Plus/Plus Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349 ||| | | ||| || |||||||| || || || || ||||||||||| || | | | Sbjct 120167 ATGGCACCAGCAATCGGTATCGACTTGGGTACGACCTACTCATGTGTGGGCATCTACAGA 120226 Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409 |||| || | ||||| ||| | || ||||| || ||||| ||||| || |||| ||| Sbjct 120227 GATGACCGCATTGAGATCATCGCCAACGACCAGGGTAACCGCACAACACCCTCGTTCGTC 120286 Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469 ||||| || || | || || ||| | || || ||||||| ||||| || |||||| Sbjct 120287 GCCTTCACCGACACCGAGCGCCTCATCGGTGACTCCGCAAAGAATCAAGTCGCCATGAAC 120346 Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529 || |||| || ||||| ||||| ||||| || || || || ||||| ||| | Sbjct 120347 CCAGTCAACACAGTCTTCGACGCCAAGCGCCTGATCGGCCGGAAGTTCGACGATGCTGAG 120406 Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTC--CCGGTGTGGCTGATAAGC 195587 || || | ||| || ||| | | | | | ||| | || | | ||||| |||| Sbjct 120407 GTGCAGGCCGACATGAAGCATTTCCCCT-TCAAGGTCATCAACAAGGGTGGC----AAGC 120461 Query 195588 CTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGT 195647 | || | | || || || | || ||| |||| || || | || || || || || | Sbjct 120462 CGGTGGTACAAGTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCAT 120521 Query 195648 CTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAG 195707 | ||||| | | |||||| ||||||||||| | | | | ||| || || || Sbjct 120522 CAATGGTCCTCACCAAGATGCGCGAGACTGCGGAGGCATACCTTGGTGGCACAGTCAACA 120581 Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 |||| || || ||||| || || ||||||| || || || || || ||||| ||||| | Sbjct 120582 ATGCTGTCGTCACTGTCCCAGCATACTTCAACGACTCTCAGCGCCAAGCGACCAAGGATG 120641 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAA 195827 ||| | || || || || ||| || | || ||||| || || || || ||||||| Sbjct 120642 CTGGTCTCATCGCCGGCCTGAACGTCCTGCGCATCATCAACGAGCCTACCGCCGCTGCAA 120701 Query 195828 TTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCG 195887 |||| || ||||| |||||||| | || | || || || | ||||| || | | Sbjct 120702 TTGCCTACGGTCTCGACAAGAAGACCGAGGGCGAGCGCAACGTGCTCATCTTCGACTTGG 120761 Query 195888 GTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGG 195947 |||||||||| |||||||| || ||||| | || || | || || ||||| || ||| Sbjct 120762 GTGGTGGTACCTTTGATGTTTCTCTTCTTACCATCGAGGAGGGCATCTTCGAGGTCAAGT 120821 Query 195948 CTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 | |||||||| ||||| || | ||||| || || ||||| Sbjct 120822 CCACTGCTGGAGATACCCACTTGGGTGGCGAGGACTTCGA 120861 Score = 210 bits (232), Expect = 3e-49 Identities = 543/825 (66%), Gaps = 13/825 (2%) Strand=Plus/Plus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 || || || || || | || || || || || || || |||||||||||||| | || Sbjct 120990 GCCCTCCGCCGTCTGCGCACCGCTTGCGAGCGCGCGAAGCGAACTCTCTCTTCCTCCGCA 121049 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || || | ||||| || ||| | | || || | |||||||| || | || ||| Sbjct 121050 CAGACCTCCATCGAGATCGACTCGCTCTACGAGGGTGTCGACTTCTACACCTCCATCACC 121109 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 ||||| || || || ||| | | || | || | ||||| || || || Sbjct 121110 CGTGCCCGCTTCGAGGAGCTGTGCCAGGACCTCTTCCGCTCCACCATGGAGCCCGTCGAG 121169 Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 | || || ||||| ||||| || |||||| || | || || ||| | || || Sbjct 121170 CGCACTCTGCGCGACGCCAAGATCGACAAGTCTTCCGTCCACGAGATCGTCTTGGTCGGT 121229 Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360 ||||| ||||||||||| ||| | || ||||| | || ||||||||| || || Sbjct 121230 GGATCCACCCGTATTCCCAAGGTCCAGAAGATGGTCTCCGACTTCTTCAACGGCAAGGAG 121289 Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420 || | |||||||| || || || ||||| || ||||| ||||| ||||| || Sbjct 121290 CCCAATCGCTCTATCAACCCCGACGAGGCCGTTGCCTACGGTGCCGCCGTCCAGGCCGCC 121349 Query 196421 ATTCTCTCAGGTGTTGACAATAATAAC--GTCCA------AGATCTTCTGCTACTTGATG 196472 |||||||| |||| ||| | | | ||||| ||||| ||||| || || | Sbjct 121350 ATTCTCTCCGGTG---ACACTTCCAGCAAGTCCACCAACGAGATC--CTGCTCCTCGACG 121404 Query 196473 TTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATA 196532 | || || | || || ||| | || || || |||||||| |||||| | || | Sbjct 121405 TCGCGCCGTTGTCTCTCGGTATCGAGACCGCTGGTGGTGTCATGACTCCTCTCATCAAGC 121464 Query 196533 GGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAAC 196592 | ||||| || || || || |||||| | ||| || || | ||||| || || | Sbjct 121465 GTAACACCACCATCCCCACCAAGAAGTCCGAGACCTTCTCGACCTTCTCCGACAACCAGC 121524 Query 196593 CAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTAC 196652 | ||||| | || || || | || || || || |||| | ||||| ||| | || Sbjct 121525 CTGGTGTGCTCATCCAGGTTTTCGAGGGCGAGCGTGCCCGCACGAAGGACAACAACCTTA 121584 Query 196653 TTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATG 196712 | || | ||||| | || || || ||| |||| ||| | |||||||| ||||| | | Sbjct 121585 TGGGCAAGTTCGAGCTCACTGGCATCCCACCTGCGCCCCGCGGTGTTCCTCAGATCGAGG 121644 Query 196713 TTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTG 196772 | ||||| | || || || || || | |||||| | ||| || |||| | | Sbjct 121645 TCACTTTCGACCTTGATGCCAACGGTATCATGAACGTCTCCGCTCTCGAGAAGGGCACCG 121704 Query 196773 GCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTG 196832 |||| | | |||||||| || ||||| || ||||| || || || ||||||||||| | Sbjct 121705 GCAAGACCAACAAGATTGTCATCACCAACGATAAGGGCCGCCTGTCCAAGGAGGAAATCG 121764 Query 196833 AACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 | || ||| | || || || ||||||| ||| || || |||| Sbjct 121765 AGCGCATGTTGGCTGAGGCCGAGAAGTACAAGGACGAGGATGAGG 121809 >seq3230 Length=199858 Score = 161 bits (178), Expect = 1e-34 Identities = 154/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||| || || || || || || || || || ||||| || || ||||| | Sbjct 170552 GTGGTATGCAAATATTCGTCAAGACACTCACCGGCAAGACGATCACACTGGAAGTTGAAT 170611 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | |||||||| ||||| ||| |||| ||||||||||||| |||||||| || ||||| | Sbjct 170612 CATCAGACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGAATCCCACCGG 170671 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| || || || || || || || || |||||||| || || || || || |||||| Sbjct 170672 ATCAACAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCTGATT 170731 Query 172037 ACAACGTTCAAAAGGAG 172053 ||||| |||| |||||| Sbjct 170732 ACAACATTCAGAAGGAG 170748 Score = 147 bits (162), Expect = 3e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 |||||||| || ||||| || ||||| ||||| || || || ||||| || | || | Sbjct 170125 ACTGGAAAGACCATCACGCTTGAGGTCGAGTCCTCGGATACCATCGACAATGTGAAGAGC 170184 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||||||||| ||||| |||||||| || || ||||| || || || || || || || Sbjct 170185 AAGATTCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCCTCATCTTCGCCGGAAAG 170244 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||| ||||| || |||||| || |||||| | || |||||||| ||||| ||| Sbjct 170245 CAGCTTGAGGATGGGCGCACCCTCAGCGACTACAACATCCAGAAGGAGTCCACTCTCCAC 170304 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 | || || | || || |||||| Sbjct 170305 TTGGTGCTCCGCCTCCGTGGTGGT 170328 >seq2882 Length=147932 Score = 129 bits (142), Expect = 8e-25 Identities = 137/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930 || || || ||||| || || || || |||||||||||||| |||||||| ||||| ||| Sbjct 6766 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCGTCCGACACCATC 6707 Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990 || ||| |||| |||||| || |||||||| || || ||||| || || || ||| | Sbjct 6706 GACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCAACAGCGATTG 6647 Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAG 172050 || || || || || || || || ||||| || ||||| || |||||| | |||||| Sbjct 6646 ATCTTCGCCGGAAAGCAACTCGAGGATGGCCGAACCCTGAGCGACTACAACATCCAAAAG 6587 Query 172051 G 172051 | Sbjct 6586 G 6586 >seq2320 Length=314285 Score = 93.3 bits (102), Expect = 6e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || |||||||||||||| || ||||| Sbjct 232965 ATGCAGATCTTCGTGAAGACCCTAACGGGCAAGACGATCACCCTCGAGGTGGAATCGTCC 232906 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAG 171960 ||||| ||||| || |||| |||||||||| | |||| Sbjct 232905 GACACCATCGACAATGTCAAGTCCAAGATTCAGGGTAAG 232867 Score = 84.2 bits (92), Expect = 3e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 171954 AGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGA 172013 ||| ||||||||||| ||||| || || || || || || || || || || || || || Sbjct 232793 AGACAAGGAAGGCATCCCACCGGACCAACAGCGCCTGATCTTCGCCGGCAAGCAACTCGA 232734 Query 172014 AGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 ||||| || ||||| | || |||||| | || |||||||| || || ||| | || || Sbjct 232733 GGATGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTCCT 232674 Query 172074 AAGGCTTCGGGGTGGT 172089 | || || |||||| Sbjct 232673 CCGCCTCCGTGGTGGT 232658 >seq795 Length=24247 Score = 87.8 bits (96), Expect = 2e-12 Identities = 125/175 (71%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 196260 AGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGA 196319 |||| || ||| |||||||| || || || ||||| || || || ||||||||||| Sbjct 3514 AGATCGAGAAGAGCAAGGTTGACGAGATCGTGCTTGTTGGTGGTTCTACCCGTATTCCCC 3455 Query 196320 AGATTCAACAGATGCTTTCTAGC---TTCTTCAATAATAAAGATTTAAACAAAACGATCA 196376 ||| ||||| ||| ||| |||||||| || | | | || | |||| Sbjct 3454 GGAT---ACAGAAGCTCCTCAGCGATTTCTTCAACGGCAAGAAGCTCGAGAAGAGCATCA 3398 Query 196377 ACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431 |||| ||||| || ||||| || ||||| ||||| ||||||| ||||||||| || Sbjct 3397 ACCCTGATGAGGCCGTTGCCTACGGTGCCGCCGTCCAGGCTGGTATTCTCTCCGG 3343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657832195892560