Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq3339 156 3e-33 >seq3339 Length=279783 Score = 156 bits (172), Expect = 3e-33 Identities = 218/305 (71%), Gaps = 2/305 (1%) Strand=Plus/Plus Query 34306 GACACGATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATG 34365 ||||| ||| | ||||||| ||||| | || ||| || | |||||||||| |||| Sbjct 238183 GACAC--TGACCACAGTCTCAGGGTTCTTGCACTCCTTGCAGAGCACAAACTTGTTGATG 238240 Query 34366 AAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGT 34425 || ||||| || |||||| | ||| | ||||| | |||||||| ||| | || Sbjct 238241 AAGCCATCGAGGTAGTCCTGAAGCTTGCTCGCTTCGTGAGCGCCGTTGATGATCCAGCGG 238300 Query 34426 TCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGG 34485 |||| ||| |||| | || || || ||||||||| | || |||||||| || | Sbjct 238301 TCGTCCTTGGGGTCGATGTTTGTCTGAGCACCCAGCTCGAAGCCAAAGTACTTGATCACG 238360 Query 34486 TAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTG 34545 || | | || || | ||| | |||| | | || |||||||||||| |||||| Sbjct 238361 TAGTTTGGTGGGCGGGCGAGCTGTTGAGCGACGTTGCTCAAGTTGACGATGACGGTCTTG 238420 Query 34546 ATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAAC 34605 |||||||| ||||||||||||||||| | ||||||| ||| |||||||||||||| Sbjct 238421 ATGCCGTTACCCTTTCCTTCGACCTTAGACTGGATGCGCTCCATCTTGTAGCGGTAGAAA 238480 Query 34606 GCGTC 34610 | ||| Sbjct 238481 GGGTC 238485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412823119274789