Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq3230 140 6e-28
>seq3230
Length=199858
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | || ||| || || |||||||| || || ||||| || || ||||||||
Sbjct 170783 CCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAA 170724
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | ||||| || || || || || || ||||| || | |||||||| || ||
Sbjct 170723 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGGG 170664
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
||||||||||| ||||||||||| | || || || || ||||| || | ||| |||
Sbjct 170663 ATTCCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCTGATGATTCAACT 170604
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || ||||||||||| || | ||||| || ||||| |||||
Sbjct 170603 TCCAGTGTGATCGTCTTGCCGGTGAGTGTCTTGACGAATATTTGCAT 170557
Score = 114 bits (126), Expect = 3e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| ||||| ||||| || || || || || || | | ||||||||| |||||
Sbjct 170531 TGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCGTCTTCGAGTTGC 170472
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| || || ||||| | || ||||| || || || || || ||||| || || |||||
Sbjct 170471 TTGCCGGCGAAGATCAATCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTC 170412
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
| || ||||| || || || || | || || ||||| || ||||||||||| ||
Sbjct 170411 GACTTAACATTGTCGATGGTGTCCGACGACTCCACCTCCAAGGTGATCGTCTTGCCGGTG 170352
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| ||||| || || ||||||||
Sbjct 170351 AGGGTCTTGACGAAGATCTGCAT 170329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981780994905147
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |