Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq3230 140 6e-28 >seq3230 Length=199858 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | || ||| || || |||||||| || || ||||| || || |||||||| Sbjct 170783 CCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAA 170724 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||||| || || || || || || ||||| || | |||||||| || || Sbjct 170723 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGGG 170664 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| ||||||||||| | || || || || ||||| || | ||| ||| Sbjct 170663 ATTCCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCTGATGATTCAACT 170604 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || ||||||||||| || | ||||| || ||||| ||||| Sbjct 170603 TCCAGTGTGATCGTCTTGCCGGTGAGTGTCTTGACGAATATTTGCAT 170557 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| ||||| ||||| || || || || || || | | ||||||||| ||||| Sbjct 170531 TGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCGTCTTCGAGTTGC 170472 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || || ||||| | || ||||| || || || || || ||||| || || ||||| Sbjct 170471 TTGCCGGCGAAGATCAATCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTC 170412 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | || ||||| || || || || | || || ||||| || ||||||||||| || Sbjct 170411 GACTTAACATTGTCGATGGTGTCCGACGACTCCACCTCCAAGGTGATCGTCTTGCCGGTG 170352 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| Sbjct 170351 AGGGTCTTGACGAAGATCTGCAT 170329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981780994905147