Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1589 313 2e-80 seq1655 187 2e-42 seq3230 95.1 1e-14 seq2320 82.4 7e-11 >seq1589 Length=144912 Score = 313 bits (346), Expect = 2e-80 Identities = 1118/1726 (65%), Gaps = 59/1726 (3%) Strand=Plus/Minus Query 148061 CTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTTATCTTCAT 148117 ||| || ||||| || ||||||||||||| ||| | | ||| | |||| | || Sbjct 48226 CTGATCGATGAATGCACCACGGTCAGCGGACATCTGGACGATGTGACGCTGGCTG---AT 48170 Query 148118 CTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCAC 148177 ||||||| | |||||||||| ||||| | || |||||| |||||||| | Sbjct 48169 CTCCCAGACAGTCTTGTACAAAGCCTTGAGGTCGTCAGGAATGTTTGGAATGCGCTGAAT 48110 Query 148178 CGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGAT 148237 || || | | || | || | || ||| | ||| | | ||| |||| | Sbjct 48109 GGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCTGACCACAGGCCACGCTCAAC 48050 Query 148238 CAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAG 148297 || ||| | || || | | || || ||||| |||||||| |||||||| || || Sbjct 48049 CAAGTCCTTGAGCAACCATGGGTTGACAACCTGGAACTCGCCAGCGAGCACACGACGGGA 47990 Query 148298 ATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGT 148357 || | |||||| || | || || || |||||||| |||| ||||||| ||| | Sbjct 47989 GTAGATGTTGCTGGTGTATGGCTCGAAGCACTCGTTGAAACCCATGATCTGCGAGGTGGA 47930 Query 148358 TGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCG 148417 ||| || |||||| || || || ||||||||||| | |||| | | || ||| Sbjct 47929 TGCAGTCGGCATGGGAGCGACGAGGAGCGAGTTGCGAACACCGTGCTCGGCGATCTTGGC 47870 Query 148418 CTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAG 148477 ||| || || |||||||||||||| | || ||||| ||||||||||||||| || Sbjct 47869 CTTGAGTGCGGCCCAGTCCCAGAGATCAGTGGGAGTCACACCCCACATGTCGTACTGAAG 47810 Query 148478 AATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAG 148537 ||| | | |||| ||||||||| | ||| ||||| || || || || Sbjct 47809 CTCGCCCTTGGAAACGGGAGAGCCCTCGTATGTCTCGTATGGTCCAAGCTTAGCAGCGAG 47750 Query 148538 TTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGC-- 148595 ||||| || ||| || ||| || || |||||| || || |||||||| Sbjct 47749 ATCGCATGAAGCGGTGAGAGCAGCGTGATAGATGGTCTCGAAGATCTGAATGTTGAGCTG 47690 Query 148596 -AGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCC 148654 | ||| | | | ||| | ||||| ||||| || || || |||||||| || Sbjct 47689 GCGAGCCTCAGGAGAG---TCGAAAGGCATGCGCAGAGCCAAGAAAGCATCGGCAAGACC 47633 Query 148655 CTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCG 148713 | || || | || ||||| ||||| | |||| ||| || |||| | | | Sbjct 47632 GTTGACACCGAGACCGATGGGACGGTGACGGAAGTTGCTCTTGCGAGC-CTCTGGCACTG 47574 Query 148714 GATAGTGGTTGCGGTCGATGATCTTG-TCAAG--ATTGCGCACCACCACCTTT--GTAAT 148768 | ||||||||| |||||||||||| ||||| ||| || ||| || | Sbjct 47573 GGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTGGTGAC-----GGTTTGAGTGAC 47519 Query 148769 TCTGCGCAGCAATTCAAAATCGTA---CTTGTCATCTA---CGATGCATCGGTTCACGGC 148822 | | ||| ||||| ||| | || || || | ||| | | | | ||| Sbjct 47518 CTGGTGGAGCTTGTCAAAGTCGAAACGCTCGTTCTCAATGTCGACGTAGGTGGGGAGGGC 47459 Query 148823 GATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGC 148882 || ||| || || ||||||||||| |||||| || || ||||||| | |||||||| Sbjct 47458 GAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCGGT 47399 Query 148883 GCACAGATT---GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCA 148939 ||| || || ||||| || || |||| |||||| || |||||||||| |||| Sbjct 47398 GCAGAGGTTGGAGCTGCGGATGGTC---CCCAAGTTCTTCTGGTTGCTCTTGCCGTTGGC 47342 Query 148940 CGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCG 148999 ||||||||||| || ||||| || ||| || || ||| | || | ||| || Sbjct 47341 AGCGTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGATG--GCG 47284 Query 149000 ATGC--AGGTCCTGCGCGCGCACTTGCTGCTCGTAGC-GACCCTCCTGCTCGTATAAAGT 149056 | || | ||| ||||| ||| || | || | ||||| |||||||| Sbjct 47283 TACCAGAGCTTCTGAGCGCGGACTGTCT-CACGACCCTTGCCCTCACGCTCGTATCGCTC 47225 Query 149057 ATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCA 149116 |||||| ||||||| | |||||||| ||| | ||||||||||||| ||| ||||| Sbjct 47224 GTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAGGGCA 47165 Query 149117 CATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAG 149176 ||| | | ||| | || | | || |||||||| |||||||| ||||||||||| Sbjct 47164 CATCAAAGTCCAAGTGGTGTTCTGCTCAACACGCTTCATGAACAGATCAGGCACCCAGAG 47105 Query 149177 CGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAG 149236 |||| | | ||||| || || || || ||| ||| || | | Sbjct 47104 ACCGTAGAACAAATCGCGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCAA 47045 Query 149237 CACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC-- 149294 | | ||| | || |||||||| ||||| ||||||| |||| || || ||| Sbjct 47044 GAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCGAAAGCACCAGGTCGCTT 46985 Query 149295 -TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAAT 149353 ||||||||||||||||||| ||| | ||||||||||||| || | ||| ||| | | Sbjct 46984 GTTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAG 46925 Query 149354 GCCACTGGCAGTGCCGTTAGTAGAGCT----AATGCGACTGCCGCGCGCTCGCACTTTGT 149409 || ||| || ||||| ||| ||| |||| | | |||||| || || Sbjct 46924 ACCGTTGGATGTTCCGTTTGTACCGCTGATGTATGCTCCAGTCGCGCGGATGC----GGT 46869 Query 149410 GCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTC 149468 | ||||||| ||||||||||| ||| ||| ||||| ||||| ||| | || || Sbjct 46868 GAACGTTGAGTCCGATGCCGCCAGCGTTCTTGGAGATCATGGCGCAGGTCTTCAAG-GTG 46810 Query 149469 GAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGC 149528 ||||||||| || |||||||| ||||||| | || ||||| || || || Sbjct 46809 TCGTAGATGCCATCAATGCTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGA 46750 Query 149529 GGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTC 149588 | | || ||||| ||||| || || || ||||| || || || | | Sbjct 46749 GCGTTGGGTGTTCCGGCGCTGAACAGCGTAGGCGAAGCATGTGTGAAGTACTTGTTCGAC 46690 Query 149589 ATCATCTCGTACGACTCGA--GCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGA 149646 || | ||| | ||| | ||| | || |||||||| || |||||||| | || | Sbjct 46689 ATGTAGTTGTAGGTCTCAATGGCAGAC--TCAATGTCATCACCGTGGATGCCAACAGCAA 46632 Query 149647 CGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGC 149706 | ||||| | ||| || || |||| ||| || || ||| || | || | ||| Sbjct 46631 CACGCATGATCATCTGTTGTGGTCTCTCGGCAACCTTGCCGTTGATCCTCAGAAGGTATG 46572 Query 149707 CGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCG 149752 | || || |||||| | |||||||| | ||||| ||||| || Sbjct 46571 ATCTCTCCAGCGTCTTGAATCCAAAGTATTGGTAGTTGAAGTCACG 46526 >seq1655 Length=66175 Score = 187 bits (206), Expect = 2e-42 Identities = 533/809 (66%), Gaps = 19/809 (2%) Strand=Plus/Minus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||| |||||||| || ||||| || ||||| |||||||| | | || ||||| | ||| Sbjct 52168 GTAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTGCCTCCGAGGGAGATGTTCTCCAT 52109 Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCG 120473 ||| ||||| ||||| | ||||| ||| ||| | | ||| | | ||| || || Sbjct 52108 AAAGTCGAAGGGGTTTGTGGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAGGAGGAGACG 52049 Query 120474 GTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCAC 120533 ||| || || ||||| ||||||| ||||||| || |||||||| || || | ||| || Sbjct 52048 GTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCGC-AC 51990 Query 120534 CGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGA 120592 | | | || | |||| |||||||| ||| ||| | || ||||| ||| ||| | Sbjct 51989 ATGGGAGGGCGTCTGTGAGAAACTCCTGCTCGATGACAACGGCCTCGGTGATGATGTCTT 51930 Query 120593 GCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAAAGT 120652 | | ||| | ||||| | || | | | | | |||||| || |||| Sbjct 51929 CAACAACCTGGTTTGATGGCTTGTTGTTGAGGTGGGA---GAACAGCAGGCAGGCGAAGT 51873 Query 120653 CCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGA 120712 | ||||||| ||||||||| || || || ||||||||| || || ||||||||||||| Sbjct 51872 CGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGA 51813 Query 120713 TGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCA 120772 || | |||| | |||| |||| || || || || ||||| | |||||| | Sbjct 51812 GACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCGGAGAAGAAGATGCCCTCGA 51753 Query 120773 CGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACTTCA 120832 | ||||||||||| | || ||| || |||| ||||| | |||||| || Sbjct 51752 TGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTCGAGTTCTTGTCGGAGATCCATCGCA 51693 Query 120833 TGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAG---CA 120889 ||||| || ||||| || || | ||| || || |||| ||||| | || | Sbjct 51692 GCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAGAGGTACG 51633 Query 120890 TGTCGCGCTCGCCCTCCTCCGCAATCAGCTGATGGATGAGCAGATTGTACATTTCCGTGT 120949 || ||| | || | | | || || |||||| || ||| | || | || Sbjct 51632 TGCGTTGCTTGGGCT-CGCTG--ATGTATGTATCGATGAGGAGGGAGTATGTCTCGGAGT 51576 Query 120950 GCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTCCAGCTCGGGCACCG 121009 | | | ||| |||| | ||| ||| ||| | | ||||| | ||||| Sbjct 51575 GGATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGCACCT 51516 Query 121010 C-CCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGGCGGCGGCGAAGAAC 121068 | || ||| | | ||| || ||||| ||| ||||| | |||| ||| |||||||| Sbjct 51515 CTCCACTG-AAGCGCTCAATGAGGTTCTCATTGACGATTCCATCGGAGGCAGCGAAGAAG 51457 Query 121069 GCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGA---GCTTGTGCGCAAAATCG 121125 ||||| ||||| ||| ||| ||||||||||| ||| |||||| | | ||| Sbjct 51456 GCCAGGACGTGAGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTC---CAGTCG 51400 Query 121126 TCATAGTCCTTGGACAGGTCGACCTCCTC 121154 | | ||||||||||| |||| |||||| Sbjct 51399 TGAAGATCCTTGGACAGATCGATCTCCTC 51371 >seq3230 Length=199858 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGA 133512 || || | |||| ||| ||||| || |||||||| | || || || ||||| | Sbjct 170762 AAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGTGTCCGGCCG--TCCTCAA 170705 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||||||| ||| | ||||| ||||| || || || ||||| ||||||||||| | Sbjct 170704 GCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGGGATTCCTTCCTTGTCTTGAA 170645 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||||| | || | |||||| | | || || || | |||| || |||| Sbjct 170644 TCTTGGACTTGACGTTGTCGATCGTGTCTGATGATTCAACTTCCAGTGTGATCGTCTTGC 170585 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || || ||||| || ||||| Sbjct 170584 CGGTGAGTGTCTTGACGAATATTTGCAT 170557 Score = 91.5 bits (100), Expect = 1e-13 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| |||| | ||| | ||||| |||||||| || Sbjct 170297 GTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGCCCATCCTCAAGCTGCTTTCCG 170238 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| ||||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct 170237 GCGAAGATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGAATCTTGCTCTTC 170178 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 | | || | || || | || ||| || || | |||| ||| || || |||| Sbjct 170177 ACATTGTCGATGGTATCCGAGGACTCGACCTCAAGCGTGATGGTCTTTCCAGTCA 170123 >seq2320 Length=314285 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || ||||| ||| | ||| | | | |||||||| Sbjct 232680 AAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCA-TCCTCGAG 232738 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGT 133570 |||||||| ||| | || || ||||| ||||| || ||||||||||||||||| || Sbjct 232739 TTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGTGGGATGCCTTCCTTGTCTGT 232795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483398604942520