Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq1589 313 2e-80
seq1655 187 2e-42
seq3230 95.1 1e-14
seq2320 82.4 7e-11
>seq1589
Length=144912
Score = 313 bits (346), Expect = 2e-80
Identities = 1118/1726 (65%), Gaps = 59/1726 (3%)
Strand=Plus/Minus
Query 148061 CTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTTATCTTCAT 148117
||| || ||||| || ||||||||||||| ||| | | ||| | |||| | ||
Sbjct 48226 CTGATCGATGAATGCACCACGGTCAGCGGACATCTGGACGATGTGACGCTGGCTG---AT 48170
Query 148118 CTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCAC 148177
||||||| | |||||||||| ||||| | || |||||| |||||||| |
Sbjct 48169 CTCCCAGACAGTCTTGTACAAAGCCTTGAGGTCGTCAGGAATGTTTGGAATGCGCTGAAT 48110
Query 148178 CGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGAT 148237
|| || | | || | || | || ||| | ||| | | ||| |||| |
Sbjct 48109 GGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCTGACCACAGGCCACGCTCAAC 48050
Query 148238 CAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAG 148297
|| ||| | || || | | || || ||||| |||||||| |||||||| || ||
Sbjct 48049 CAAGTCCTTGAGCAACCATGGGTTGACAACCTGGAACTCGCCAGCGAGCACACGACGGGA 47990
Query 148298 ATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGT 148357
|| | |||||| || | || || || |||||||| |||| ||||||| ||| |
Sbjct 47989 GTAGATGTTGCTGGTGTATGGCTCGAAGCACTCGTTGAAACCCATGATCTGCGAGGTGGA 47930
Query 148358 TGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCG 148417
||| || |||||| || || || ||||||||||| | |||| | | || |||
Sbjct 47929 TGCAGTCGGCATGGGAGCGACGAGGAGCGAGTTGCGAACACCGTGCTCGGCGATCTTGGC 47870
Query 148418 CTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAG 148477
||| || || |||||||||||||| | || ||||| ||||||||||||||| ||
Sbjct 47869 CTTGAGTGCGGCCCAGTCCCAGAGATCAGTGGGAGTCACACCCCACATGTCGTACTGAAG 47810
Query 148478 AATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAG 148537
||| | | |||| ||||||||| | ||| ||||| || || || ||
Sbjct 47809 CTCGCCCTTGGAAACGGGAGAGCCCTCGTATGTCTCGTATGGTCCAAGCTTAGCAGCGAG 47750
Query 148538 TTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGC-- 148595
||||| || ||| || ||| || || |||||| || || ||||||||
Sbjct 47749 ATCGCATGAAGCGGTGAGAGCAGCGTGATAGATGGTCTCGAAGATCTGAATGTTGAGCTG 47690
Query 148596 -AGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCC 148654
| ||| | | | ||| | ||||| ||||| || || || |||||||| ||
Sbjct 47689 GCGAGCCTCAGGAGAG---TCGAAAGGCATGCGCAGAGCCAAGAAAGCATCGGCAAGACC 47633
Query 148655 CTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCG 148713
| || || | || ||||| ||||| | |||| ||| || |||| | | |
Sbjct 47632 GTTGACACCGAGACCGATGGGACGGTGACGGAAGTTGCTCTTGCGAGC-CTCTGGCACTG 47574
Query 148714 GATAGTGGTTGCGGTCGATGATCTTG-TCAAG--ATTGCGCACCACCACCTTT--GTAAT 148768
| ||||||||| |||||||||||| ||||| ||| || ||| || |
Sbjct 47573 GGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTGGTGAC-----GGTTTGAGTGAC 47519
Query 148769 TCTGCGCAGCAATTCAAAATCGTA---CTTGTCATCTA---CGATGCATCGGTTCACGGC 148822
| | ||| ||||| ||| | || || || | ||| | | | | |||
Sbjct 47518 CTGGTGGAGCTTGTCAAAGTCGAAACGCTCGTTCTCAATGTCGACGTAGGTGGGGAGGGC 47459
Query 148823 GATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGC 148882
|| ||| || || ||||||||||| |||||| || || ||||||| | ||||||||
Sbjct 47458 GAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCGGT 47399
Query 148883 GCACAGATT---GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCA 148939
||| || || ||||| || || |||| |||||| || |||||||||| ||||
Sbjct 47398 GCAGAGGTTGGAGCTGCGGATGGTC---CCCAAGTTCTTCTGGTTGCTCTTGCCGTTGGC 47342
Query 148940 CGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCG 148999
||||||||||| || ||||| || ||| || || ||| | || | ||| ||
Sbjct 47341 AGCGTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGATG--GCG 47284
Query 149000 ATGC--AGGTCCTGCGCGCGCACTTGCTGCTCGTAGC-GACCCTCCTGCTCGTATAAAGT 149056
| || | ||| ||||| ||| || | || | ||||| ||||||||
Sbjct 47283 TACCAGAGCTTCTGAGCGCGGACTGTCT-CACGACCCTTGCCCTCACGCTCGTATCGCTC 47225
Query 149057 ATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCA 149116
|||||| ||||||| | |||||||| ||| | ||||||||||||| ||| |||||
Sbjct 47224 GTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAGGGCA 47165
Query 149117 CATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAG 149176
||| | | ||| | || | | || |||||||| |||||||| |||||||||||
Sbjct 47164 CATCAAAGTCCAAGTGGTGTTCTGCTCAACACGCTTCATGAACAGATCAGGCACCCAGAG 47105
Query 149177 CGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAG 149236
|||| | | ||||| || || || || ||| ||| || | |
Sbjct 47104 ACCGTAGAACAAATCGCGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCAA 47045
Query 149237 CACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC-- 149294
| | ||| | || |||||||| ||||| ||||||| |||| || || |||
Sbjct 47044 GAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCGAAAGCACCAGGTCGCTT 46985
Query 149295 -TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAAT 149353
||||||||||||||||||| ||| | ||||||||||||| || | ||| ||| | |
Sbjct 46984 GTTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAG 46925
Query 149354 GCCACTGGCAGTGCCGTTAGTAGAGCT----AATGCGACTGCCGCGCGCTCGCACTTTGT 149409
|| ||| || ||||| ||| ||| |||| | | |||||| || ||
Sbjct 46924 ACCGTTGGATGTTCCGTTTGTACCGCTGATGTATGCTCCAGTCGCGCGGATGC----GGT 46869
Query 149410 GCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTC 149468
| ||||||| ||||||||||| ||| ||| ||||| ||||| ||| | || ||
Sbjct 46868 GAACGTTGAGTCCGATGCCGCCAGCGTTCTTGGAGATCATGGCGCAGGTCTTCAAG-GTG 46810
Query 149469 GAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGC 149528
||||||||| || |||||||| ||||||| | || ||||| || || ||
Sbjct 46809 TCGTAGATGCCATCAATGCTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGA 46750
Query 149529 GGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTC 149588
| | || ||||| ||||| || || || ||||| || || || | |
Sbjct 46749 GCGTTGGGTGTTCCGGCGCTGAACAGCGTAGGCGAAGCATGTGTGAAGTACTTGTTCGAC 46690
Query 149589 ATCATCTCGTACGACTCGA--GCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGA 149646
|| | ||| | ||| | ||| | || |||||||| || |||||||| | || |
Sbjct 46689 ATGTAGTTGTAGGTCTCAATGGCAGAC--TCAATGTCATCACCGTGGATGCCAACAGCAA 46632
Query 149647 CGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGC 149706
| ||||| | ||| || || |||| ||| || || ||| || | || | |||
Sbjct 46631 CACGCATGATCATCTGTTGTGGTCTCTCGGCAACCTTGCCGTTGATCCTCAGAAGGTATG 46572
Query 149707 CGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCG 149752
| || || |||||| | |||||||| | ||||| ||||| ||
Sbjct 46571 ATCTCTCCAGCGTCTTGAATCCAAAGTATTGGTAGTTGAAGTCACG 46526
>seq1655
Length=66175
Score = 187 bits (206), Expect = 2e-42
Identities = 533/809 (66%), Gaps = 19/809 (2%)
Strand=Plus/Minus
Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413
||| |||||||| || ||||| || ||||| |||||||| | | || ||||| | |||
Sbjct 52168 GTAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTGCCTCCGAGGGAGATGTTCTCCAT 52109
Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCG 120473
||| ||||| ||||| | ||||| ||| ||| | | ||| | | ||| || ||
Sbjct 52108 AAAGTCGAAGGGGTTTGTGGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAGGAGGAGACG 52049
Query 120474 GTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCAC 120533
||| || || ||||| ||||||| ||||||| || |||||||| || || | ||| ||
Sbjct 52048 GTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCGC-AC 51990
Query 120534 CGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGA 120592
| | | || | |||| |||||||| ||| ||| | || ||||| ||| ||| |
Sbjct 51989 ATGGGAGGGCGTCTGTGAGAAACTCCTGCTCGATGACAACGGCCTCGGTGATGATGTCTT 51930
Query 120593 GCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAAAGT 120652
| | ||| | ||||| | || | | | | | |||||| || ||||
Sbjct 51929 CAACAACCTGGTTTGATGGCTTGTTGTTGAGGTGGGA---GAACAGCAGGCAGGCGAAGT 51873
Query 120653 CCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGA 120712
| ||||||| ||||||||| || || || ||||||||| || || |||||||||||||
Sbjct 51872 CGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGA 51813
Query 120713 TGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCA 120772
|| | |||| | |||| |||| || || || || ||||| | |||||| |
Sbjct 51812 GACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCGGAGAAGAAGATGCCCTCGA 51753
Query 120773 CGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACTTCA 120832
| ||||||||||| | || ||| || |||| ||||| | |||||| ||
Sbjct 51752 TGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTCGAGTTCTTGTCGGAGATCCATCGCA 51693
Query 120833 TGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAG---CA 120889
||||| || ||||| || || | ||| || || |||| ||||| | || |
Sbjct 51692 GCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAGAGGTACG 51633
Query 120890 TGTCGCGCTCGCCCTCCTCCGCAATCAGCTGATGGATGAGCAGATTGTACATTTCCGTGT 120949
|| ||| | || | | | || || |||||| || ||| | || | ||
Sbjct 51632 TGCGTTGCTTGGGCT-CGCTG--ATGTATGTATCGATGAGGAGGGAGTATGTCTCGGAGT 51576
Query 120950 GCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTCCAGCTCGGGCACCG 121009
| | | ||| |||| | ||| ||| ||| | | ||||| | |||||
Sbjct 51575 GGATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGCACCT 51516
Query 121010 C-CCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGGCGGCGGCGAAGAAC 121068
| || ||| | | ||| || ||||| ||| ||||| | |||| ||| ||||||||
Sbjct 51515 CTCCACTG-AAGCGCTCAATGAGGTTCTCATTGACGATTCCATCGGAGGCAGCGAAGAAG 51457
Query 121069 GCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGA---GCTTGTGCGCAAAATCG 121125
||||| ||||| ||| ||| ||||||||||| ||| |||||| | | |||
Sbjct 51456 GCCAGGACGTGAGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTC---CAGTCG 51400
Query 121126 TCATAGTCCTTGGACAGGTCGACCTCCTC 121154
| | ||||||||||| |||| ||||||
Sbjct 51399 TGAAGATCCTTGGACAGATCGATCTCCTC 51371
>seq3230
Length=199858
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGA 133512
|| || | |||| ||| ||||| || |||||||| | || || || ||||| |
Sbjct 170762 AAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGTGTCCGGCCG--TCCTCAA 170705
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||||||||| ||| | ||||| ||||| || || || ||||| ||||||||||| |
Sbjct 170704 GCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGGGATTCCTTCCTTGTCTTGAA 170645
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | || | |||||| | | || || || | |||| || ||||
Sbjct 170644 TCTTGGACTTGACGTTGTCGATCGTGTCTGATGATTCAACTTCCAGTGTGATCGTCTTGC 170585
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || || ||||| || |||||
Sbjct 170584 CGGTGAGTGTCTTGACGAATATTTGCAT 170557
Score = 91.5 bits (100), Expect = 1e-13
Identities = 125/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| || ||||| |||| | ||| | ||||| |||||||| ||
Sbjct 170297 GTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGCCCATCCTCAAGCTGCTTTCCG 170238
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | ||||| ||||||||||| ||||| ||||| |||||||| ||||| |||
Sbjct 170237 GCGAAGATGAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGAATCTTGCTCTTC 170178
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638
| | || | || || | || ||| || || | |||| ||| || || ||||
Sbjct 170177 ACATTGTCGATGGTATCCGAGGACTCGACCTCAAGCGTGATGGTCTTTCCAGTCA 170123
>seq2320
Length=314285
Score = 82.4 bits (90), Expect = 7e-11
Identities = 90/117 (77%), Gaps = 2/117 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || ||||| ||| | ||| | | | ||||||||
Sbjct 232680 AAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCA-TCCTCGAG 232738
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGT 133570
|||||||| ||| | || || ||||| ||||| || ||||||||||||||||| ||
Sbjct 232739 TTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGTGGGATGCCTTCCTTGTCTGT 232795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483398604942520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |