Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq3230 95.1 8e-15
>seq3230
Length=199858
Score = 95.1 bits (104), Expect = 8e-15
Identities = 146/206 (71%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605
||| ||||| || || || |||||||| |||||||| ||||| |||| || | |||
Sbjct 170532 ATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCGTCTTCGAGTTG 170473
Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665
|| ||||| || ||||| ||||| || || | || | || || ||||| || ||
Sbjct 170472 CTTGCCGGCGAAGATCAATCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 170413
Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724
| || ||||| ||| | |||||| || ||||| || | |||||||| || || |
Sbjct 170412 CGACTT-AACATTGTCGATGGTGTCCGACGACTCCACCTCCAAGGTGATCGTCTTGCCGG 170354
Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750
| | || || || ||||||||||||
Sbjct 170353 TGAGGGTCTTGACGAAGATCTGCATA 170328
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| || | || ||| | |||||| || || |||||||| || || ||||||||||| ||
Sbjct 170783 CCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAA 170724
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
||||| || |||| || | || || ||||| || || | ||||| ||||| | ||
Sbjct 170723 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGGG 170664
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||| ||||| ||| || | | || | ||| | ||||| |||||| ||
Sbjct 170663 ATTCCTTCCTTGTCTTGAATCTT-GGACTTGACGTTGTCGATCGTGTCTGATGATTCAAC 170605
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | |||||||| || || || | || || || || || ||||||
Sbjct 170604 TTCCAGTGTGATCGTCTTGCCGGTGAGTGTCTTGACGAATATTTGCATA 170556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328689285668160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |