Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1589 183 3e-41
seq1655 84.2 2e-11
seq3230 82.4 7e-11
>seq1589
Length=144912
Score = 183 bits (202), Expect = 3e-41
Identities = 625/959 (65%), Gaps = 19/959 (2%)
Strand=Plus/Minus
Query 147459 GGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTC 147518
||||| ||| || || ||||| ||||| ||| || | | |||||| | ||| ||
Sbjct 47461 GGCGAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTC 47402
Query 147519 GGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTT-CCGATTGC 147577
|| ||| |||||| || ||| ||||| || | ||| ||||| || ||| | ||
Sbjct 47401 GGTGCAGAGGTTGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTGCCGTTGGC 47342
Query 147578 ACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACC 147637
| ||||| ||| |||| ||||| || |||||||||| || | || | ||| |
Sbjct 47341 A-GCGTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGATGG-CG 47284
Query 147638 TATGC-AGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCG 147696
|| || | ||| || || || || ||| |||||| ||||| ||||||
Sbjct 47283 TACCAGAGCTTCTGAGCGCGGACTGTCTCACGACCCTTGCCCTCACGCTCGTATCGCTCG 47224
Query 147697 TACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACAC 147756
|||| | ||| ||||| |||||||| ||| || || ||||| |||| || || |||
Sbjct 47223 TACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAGGGCAC 47164
Query 147757 ATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGC 147816
|||| | ||| || || | | ||| || ||| |||||||| |||||||| ||
Sbjct 47163 ATCAAAGTCCAAGTGGTGTTCTGCTCAACACGCTTCATGAACAGATCAGGCACCCAGAGA 47104
Query 147817 GCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGC--CCATGTTGCGTTTC--AAATT 147872
|||| | | |||||| || | | |||| | || || | | || | | ||
Sbjct 47103 CCGTAGAACAAATCGCGGGCA---CGAACCTCCTCCTTTCCGTGGTTC-TTGCGGAGATC 47048
Query 147873 -AAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTAC 147931
||| | | | ||| || |||||||| || || ||||| | ||| | ||||| |
Sbjct 47047 CAAGAAGGAGA-AGACATCTGCGTGCCATGGCTCGATGTACATGGCGAAAGCACCAGGTC 46989
Query 147932 GCTTT---CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTT 147988
|||| |||||||||||||| | ||| | ||||||||||||| |||| |||||||
Sbjct 46988 GCTTGTTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTA 46929
Query 147989 CCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCT-TGCTGCCGCGGGCTCGCACTTCG 148047
| || ||| | | || ||||| || |||| | |||| || || || | |
Sbjct 46928 CGAGACCGTTGGATGTTCCGTTTGTACCGCTGATGTATGCT-CCAGTCGCGCGGATGCGG 46870
Query 148048 TGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTC 148107
|| ||||| | || |||||||| ||| ||| || || ||||| ||| ||
Sbjct 46869 TGAACGTTGAGTCCGATGCCGCCAGCGTTCTTGGAGATCATGGCGCAGGTCTTCAAGGTG 46810
Query 148108 GTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGC 148167
||||||||| || |||||||| | || | | | | | || || || || ||
Sbjct 46809 TCGTAGATGCCATCAATGCTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGA 46750
Query 148168 GGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTC 148227
| | | ||||| || ||| || || || || || || || | || | |
Sbjct 46749 GCGTTGGGTGTTCCGGCGCTGAACAGCGTAGGCGAAGCATGTGTGAAGTACTTGTTCGAC 46690
Query 148228 ATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACG 148287
|| | || |||||||| || || ||||| || ||||| ||||| | || ||
Sbjct 46689 ATGTAGTTGTAGGTCTCAATGGCAGACTCAATGTCATCACCGTGGATGCCAACAGCAACA 46630
Query 148288 CGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCA 148347
||||||| ||| || ||||||| |||||||| | ||||||| | ||||| |||
Sbjct 46629 CGCATGATCATCTGTTGTGGTCTCTCGGCAACCTTGCCGTTGATCCTCAGAAGGTATGAT 46570
Query 148348 TTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406
| || || || ||| | |||||||| | ||| | || || | |||||| |||| ||
Sbjct 46569 CTCTCCAGCGTCTTGAATCCAAAGTATTGGTAGTTGAAGTCACGATCGTAAACGATAGC 46511
>seq1655
Length=66175
Score = 84.2 bits (92), Expect = 2e-11
Identities = 155/225 (69%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 47046 GAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGC 47105
||||| || |||||| |||||||| | || | || || || || | || ||
Sbjct 51944 GAGGCCGTTGTCATCGAGCAGGAGTTTCTCACAGACGCCCTCCCATGTGCGCTCCTCGGA 52003
Query 47106 ATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 47165
|||||||| || |||||| | || || ||||| || || || ||||| | ||
Sbjct 52004 ATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGTCTCCTCCTGGCA 52063
Query 47166 CTCGGACAACC-GAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTC 47224
||||| ||||| ||| | | || || || || || || |||||| | ||||| ||
Sbjct 52064 CTCGG-CAACCAGAAGCACTACAACGCCACAAACCCCTTCGACTTTATGGAGAACATCTC 52122
Query 47225 GCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269
|||| ||||||||||| || |||||||| || ||||| || ||
Sbjct 52123 CCTCGGAGGCAAAACCAACTTCTTCGAGAAGCGTGTCGGCGACTA 52167
>seq3230
Length=199858
Score = 82.4 bits (90), Expect = 7e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||| | ||| | ||||| || | | ||||| || || |||||||||||||| | |||
Sbjct 170322 ACGGAGGCGGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGT 170263
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
||| ||| || ||||| || |||| |||| || ||||| || |||||||| |||||
Sbjct 170262 GCGCCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATGCC 170203
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| || || ||| || |||| | || | ||||| | | ||| || || |
Sbjct 170202 CTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATGGTATCCGAGGACTCGACCTCAAG 170143
Query 132082 CGTCAGCGTTTTACCAGTCA 132101
||| | || || |||||||
Sbjct 170142 CGTGATGGTCTTTCCAGTCA 170123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476589317588280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |