Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1655 96.9 3e-15 >seq1655 Length=66175 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||| |||| || | || ||||| | |||| ||||||||| ||||| || ||||| Sbjct 51503 GCTCAATGAGGTTCTCATTGACGATTCCATCGGAGGCAGCGAAGAAGGCCAGGACGTGAG 51444 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||||| || || | |||||| || ||||||||||| | || |||||||||| Sbjct 51443 AGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCCAGTCGTGAAGATCCTTGGACA 51384 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 |||||||| ||| | ||||| | | | | |||||||||||| ||||| |||| Sbjct 51383 GATCGATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCC--AGAT 51326 Query 110892 CT 110893 || Sbjct 51325 CT 51324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445073964603360