Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 219 6e-51
seq1589 109 8e-18
seq2752 107 3e-17
>seq1655
Length=66175
Score = 219 bits (242), Expect = 6e-51
Identities = 366/516 (71%), Gaps = 30/516 (6%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || |||||||||||||| || ||||||||||||||| |||| |
Sbjct 51325 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATCGATC 51383
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTC 1455887
| | || |||| ||||| || | | ||||||||||||| |||
Sbjct 51384 TGTCCAAGGATCTTCACG----ACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTC 51439
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| |||||||| ||||| || ||| ||| |||||| ||||| ||||||||
Sbjct 51440 ATCTCTCACGTCCTGGCCTTCTT-CGCTGCCTCCGATGGAATCGTCAATGAGAACCTCAT 51498
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
| ||||| | |||||| || | || ||||| || | || ||||| ||||| ||
Sbjct 51499 TGAGCGCTTCAGTGGAGAGGTGCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAAAT 51558
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
| || || ||||||||||| || || ||||| ||||| ||||| || ||| ||| ||
Sbjct 51559 CATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGATACATACATCAGCGA 51618
Query 1456068 CCCGGTCGAG--AAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAA 1456124
|| | || | | || ||||||| ||||||||||| | || | | | ||
Sbjct 51619 GCC---CAAGCAACGCACGTACCTCTTCAACGCCATCGACAACATCCCATGCATCCGTAA 51675
Query 1456125 AAAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAG 1456181
||||| ||||||||| || ||||| | ||||| | |||||| |||||||
Sbjct 51676 GAAGGCTGACTGGGCGCTGCGATGGATCTCCGACAAGAA----CTCGAC-CTTTGCCTGC 51730
Query 1456182 CGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCAT 1456239
|| ||| ||| |||||||| | ||||||||||||| ||||| || ||| ||| ||||
Sbjct 51731 CGTCTCATCGCCTTTGCCGCCATCGAGGGCATCTTCTTCTCCGGATCATTC-GCGTCCAT 51789
Query 1456240 CTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||| ||| | |||||||| || ||||||||||| ||
Sbjct 51790 CTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCT 51825
Score = 154 bits (170), Expect = 2e-31
Identities = 234/325 (72%), Gaps = 6/325 (2%)
Strand=Plus/Plus
Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACG 1456511
||||| ||||| ||||| ||||| | | | ||| ||||||||| || | | | |
Sbjct 51864 TGCACACCGACTTCGCCTGCCTGCTGTTCTCCCACCTCAACAACAAGCCATCAAACCAGG 51923
Query 1456512 T-GCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCG 1456570
| | ||| | |||||| ||||||||| | |||||| | |||||| ||| || |
Sbjct 51924 TTGTTGAAG-ACATCATCACCGAGGCCGTTGTCATCGAGCAGGAGTTTCTCACAGACGCC 51982
Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630
|| || |||||| |||| |||||||||| |||||||||||||||||| || || |
Sbjct 51983 CTCCCATGTGCGCTCCTCGGAATGAACGCCAA-GCTCATGTGCCAGTACATCGAGTTC-G 52040
Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCG 1456690
|||||||||| || ||| ||| |||||| | ||||||||||| | | |||||
Sbjct 52041 TCGCCGACCGTCTCCTCCTGGCACTCGGCAACC-AGAAGCACTACAACGCCACAAACCCC 52099
Query 1456691 TTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT- 1456749
||| | |||||| ||||| |||| ||||| |||||||| |||||| || ||
Sbjct 52100 TTCGACTTTATGGAGAACATCTCCCTCGGAGGCAAAACCAACTTCTTCGAGAAGCGTGTC 52159
Query 1456750 GGCGAGTACGCCAAGGCCGGCGTCA 1456774
||||| ||| |||||||| ||||
Sbjct 52160 GGCGACTACCAAAAGGCCGGTGTCA 52184
>seq1589
Length=144912
Score = 109 bits (120), Expect = 8e-18
Identities = 206/303 (68%), Gaps = 0/303 (0%)
Strand=Plus/Plus
Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCC 259942
|||||| | ||||||| | ||| ||||| || |||| ||||| || | |||
Sbjct 46676 ACCTACAACTACATGTCGAACAAGTACTTCACACATGCTTCGCCTACGCTGTTCAGCGCC 46735
Query 259943 GGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATC 260002
|| || || | | ||| | || ||||| || | |||||||||| || ||
Sbjct 46736 GGAACACCCAACGCTCAGCTGGCATCCTGCTTCCTCATCGACATGAAGGATGACAGCATT 46795
Query 260003 GAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATC 260062
|| |||||||| ||||| | ||| ||||| | ||||||||| || |||||||||
Sbjct 46796 GATGGCATCTACGACACCTTGAAGACCTGCGCCATGATCTCCAAGAACGCTGGCGGCATC 46855
Query 260063 GGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAG 260122
|| | || ||| | ||||| | || || ||| | || || |||||
Sbjct 46856 GGACTCAACGTTCACCGCATCCGCGCGACTGGAGCATACATCAGCGGTACAAACGGAACA 46915
Query 260123 TCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
|||||||| || || |||||||| || || |||||| |||| || |||||||||||||||
Sbjct 46916 TCCAACGGTCTCGTACCCATGCTGCGTGTGTTTAACAACACCGCTCGCTACGTCGACCAG 46975
Query 260183 TGC 260185
||
Sbjct 46976 GGC 46978
Score = 109 bits (120), Expect = 8e-18
Identities = 111/142 (78%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 262092 AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACA 262151
|| |||||| ||||| ||| ||| || | ||||||||||||||| ||||| ||||||
Sbjct 47274 AGCTCTGGTACGCCATCCTCGAGGCTCAGACCGAGACCGGCACGCCATACATCCTCTACA 47333
Query 262152 AGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAGAGGCCAAC 262210
||||||| | |||| | ||||||||| ||||| |||| |||| | ||| |||||
Sbjct 47334 AGGACGCTGCCAACGGCAAGAGCAACCAGAAGAACTTGGGGACCATCCGCAG-CTCCAAC 47392
Query 262211 CTGTGCACCGAGATCGTCCAGT 262232
|| |||||||||||| || |||
Sbjct 47393 CTCTGCACCGAGATCATCGAGT 47414
Score = 102 bits (112), Expect = 1e-15
Identities = 159/222 (72%), Gaps = 4/222 (2%)
Strand=Plus/Plus
Query 262878 CTGGGACTGGGACGCACTGCGGGCGTCGGTTCGAC-AGCATGGCCTGCGCAACTCGTTGC 262936
||||||||||| |||||| ||| | | || | |||| || | ||||||||| | |
Sbjct 47848 CTGGGACTGGGCCGCACTCAAGGCCAAGAT-CGCCGAGCACGGTGTTCGCAACTCGCTCC 47906
Query 262937 TCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCG 262996
|||| || | |||||| || || | || ||||||||| |||| || |||| ||||
Sbjct 47907 TCGTCGCTCCCATGCCGACTGCATCCACCTCGCAGATCATGGGTTTCAACGAGTGCTTCG 47966
Query 262997 AGGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTC 263055
|| ||| ||| |||||||||||| | || || |||||| | ||||| || || |||
Sbjct 47967 AGC-CATACACCAGCAACATCTACTCCCGTCGTGTGCTCGCTGGCGAGTTCCAGGTTGTC 48025
Query 263056 AACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGG 263097
|||| || ||||| | |||| | ||| |||||||||
Sbjct 48026 AACCCATGGTTGCTCAAGGACTTGGTTGAGCGTGGCCTGTGG 48067
>seq2752
Length=254214
Score = 107 bits (118), Expect = 3e-17
Identities = 166/235 (71%), Gaps = 8/235 (3%)
Strand=Plus/Plus
Query 724908 TTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAG 724967
|| |||| || || ||||||||||| ||||| || | | ||| ||||||
Sbjct 205159 TTCATCTCCA--GTCCTCAAGCAGGTCCACCCTGATACTGGT-----ATC-TCCAACCGC 205210
Query 724968 TCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCC 725027
||||||| ||| ||||||| || ||||||||||| |||| ||| ||| ||||||||
Sbjct 205211 GCCATGTCCATCCTGAACTCCTTCGTCAACGACATCTTCGAGCGCGTCGCAACCGAGGCT 205270
Query 725028 GGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCC 725087
|| ||| | ||||||| || ||| | | ||||| ||||| ||| ||
Sbjct 205271 TCCAAGCTTGCGGCATACAACAAGAAGTCAACCATCTCCTCCCGCGAAATCCAAACCTCC 205330
Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| || || ||| | | ||| || ||||||| |||||| || |||||||||||||
Sbjct 205331 GTCCGACTCATCCTCCCCGGTGAGCTGGCCAAGCACGCTGTGTCCGAGGGCACCA 205385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177456932399026
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |