Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq3230 91.5 1e-13 >seq3230 Length=199858 Score = 91.5 bits (100), Expect = 1e-13 Identities = 163/234 (70%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 35505 TATT-TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAA 35563 |||| ||| ||||| | | | |||||| || | || |||||||| |||||||||||| Sbjct 170789 TATTGTCCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAA 170730 Query 35564 TCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCC 35623 || | | || || |||| || |||||||| || || || || | ||||| || ||| Sbjct 170729 TCAGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCC 170670 Query 35624 GAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGA 35682 | || | | |||||||| ||||| ||| | |||| | | |||||| || Sbjct 170669 GGTGGGATTCCTTCCTTGTCTTGAATCTTGGACTTGA-CGTTGTCGATCGTGTCTGATGA 170611 Query 35683 TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| || |||| |||||||| || || || | || || || ||||| ||||| Sbjct 170610 TTCAACTTCCAGTGTGATCGTCTTGCCGGTGAGTGTCTTGACGAATATTTGCAT 170557 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || |||||| || |||||||| ||| Sbjct 170327 CCACCACGGAGGCGGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTG 170268 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| ||| | || || |||||||| || || || || | ||||||||||| | |||| Sbjct 170267 AGGGTGCGCCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGA 170208 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||||||||| ||||| ||||| | | | | || || || || ||| Sbjct 170207 ATGCCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATGGTATCCGAGGACTCGACC 170148 Query 35690 TCCACCGTGATCGTTTTACCCGTCA 35714 || | |||||| || || || |||| Sbjct 170147 TCAAGCGTGATGGTCTTTCCAGTCA 170123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450772902938840