Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq3230 91.5 1e-13
>seq3230
Length=199858
Score = 91.5 bits (100), Expect = 1e-13
Identities = 163/234 (70%), Gaps = 3/234 (1%)
Strand=Plus/Minus
Query 35505 TATT-TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAA 35563
|||| ||| ||||| | | | |||||| || | || |||||||| ||||||||||||
Sbjct 170789 TATTGTCCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAA 170730
Query 35564 TCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCC 35623
|| | | || || |||| || |||||||| || || || || | ||||| || |||
Sbjct 170729 TCAGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCC 170670
Query 35624 GAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGA 35682
| || | | |||||||| ||||| ||| | |||| | | |||||| ||
Sbjct 170669 GGTGGGATTCCTTCCTTGTCTTGAATCTTGGACTTGA-CGTTGTCGATCGTGTCTGATGA 170611
Query 35683 TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| || |||| |||||||| || || || | || || || ||||| |||||
Sbjct 170610 TTCAACTTCCAGTGTGATCGTCTTGCCGGTGAGTGTCTTGACGAATATTTGCAT 170557
Score = 86.0 bits (94), Expect = 6e-12
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | || |||||| || |||||||| |||
Sbjct 170327 CCACCACGGAGGCGGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTG 170268
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| ||| | || || |||||||| || || || || | ||||||||||| | ||||
Sbjct 170267 AGGGTGCGCCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGA 170208
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || ||||||||| ||||| ||||| | | | | || || || || |||
Sbjct 170207 ATGCCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATGGTATCCGAGGACTCGACC 170148
Query 35690 TCCACCGTGATCGTTTTACCCGTCA 35714
|| | |||||| || || || ||||
Sbjct 170147 TCAAGCGTGATGGTCTTTCCAGTCA 170123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450772902938840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |