Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1655 111 5e-19 >seq1655 Length=66175 Score = 111 bits (122), Expect = 5e-19 Identities = 359/542 (66%), Gaps = 23/542 (4%) Strand=Plus/Plus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACT- 443395 || |||||| |||||||| ||||| |||||||| | ||| |||||| | || || Sbjct 51359 TTCTGGACCGCCGAGGAGATCGATCTGTCCAAGGATCTTCACGACTGGAACAAGCGCCTC 51418 Query 443396 ATCTAGCCATGAACGCGATTTCTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGA 443452 | | | | | || ||| ||||||| | | || |||||||||| || | ||| Sbjct 51419 AACGA-CGACGAGCGC---TTCTTCATCTCTCACGTCCTGGCCTTCTTCGCTGCCTCCGA 51474 Query 443453 CGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGC 443512 || |||||| |||||| || | ||| ||| | | ||| | | ||||||| Sbjct 51475 TGGAATCGTCAATGAGAACCTCATTGAGCGCTTCAGTGGAGAGGTGCAGATCCCCGAGGC 51534 Query 443513 CCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCA 443572 ||||| |||||||| |||||| | ||||||||||| ||| ||||| ||| | Sbjct 51535 CCGCTGCTTCTACGGTTTCCAAATCATGATGGAGAACATCCACTCCGAGACATACTCCCT 51594 Query 443573 GTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCG---GTCCATCTTCTCATCGTT 443629 | ||| | ||| || || | ||| | | || || || | ||||| | || Sbjct 51595 CCTCATCGATACA-TACATCAG--CGAGCCCAAGCAACGCACGTACCTCTTC--AACGC- 51648 Query 443630 CAT-GACCACG--CCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACG 443686 ||| ||| || ||| ||||| | | ||| || |||||| | ||| || || Sbjct 51649 CATCGACAACATCCCATGCATCCGTAAGAAGGCTGACTGGGCGCTGCGATGGATCTC-CG 51707 Query 443687 AGAAAATCTC-AGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGT 443745 | || | ||| | ||| | | || || |||| ||||| | |||| || | || | Sbjct 51708 ACAAGAACTCGACCTTTGCCTGCCGTCTCATCGCCTTTGCCGCCATCGAGGGCATCTTCT 51767 Query 443746 TTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTG 443805 | ||| | | || || ||||||||||||||||| |||||||| || |||| ||| || Sbjct 51768 TCTCCGG-ATCATTCGCGTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCTC 51826 Query 443806 ACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTT 443865 ||||| ||||| || ||| || |||||||| |||| |||||||||||| || Sbjct 51827 ACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTCGCCTGCCTG 51886 Query 443866 CT 443867 || Sbjct 51887 CT 51888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588261252411485