Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 129 7e-25
seq1589 111 2e-19
>seq1655
Length=66175
Score = 129 bits (142), Expect = 7e-25
Identities = 530/819 (65%), Gaps = 29/819 (4%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| ||||| |||||||| ||||||||||| || || | ||| ||||| ||||||
Sbjct 52167 TAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTGCCTCCGAGGGAGATGTTCTCCATA 52108
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 122485
||||| || || || | ||||| | ||| || || | | |||||
Sbjct 52107 AAGTCGAAGGGGTTTGTGGCGTTGTAGTGCTTCTGGTTG-----CCGAGTGCCAGGAGGA 52053
Query 122486 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGT 122545
|||| || | || |||| ||||||| | |||| || | |||||| |||| |||
Sbjct 52052 GACGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCG 51993
Query 122546 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605
||||||||| ||||| || ||| | | ||| || |||| ||||| | | ||||
Sbjct 51992 CACATGGGAGGGCGTCTGTGAGAAACTCCTGCTCGATGACAACGGCCTCGGTGATGATGT 51933
Query 122606 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACG---GCAA 122662
| | | | | | | | || | || | || | | ||| | || | || |
Sbjct 51932 CTTCAACAACCTGGTTTGATGGCTTGTT--GTTGAGG-TGGGAGAACAGCAGGCAGGCGA 51876
Query 122663 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCA 122722
| || ||| | ||||| || ||||| || || || || |||||| || || ||||
Sbjct 51875 AGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCA 51816
Query 122723 TGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCC 122781
||||||| |||||||||||||| | || | ||| |||||| |||||||||||||| |||
Sbjct 51815 TGAGACCACGCTTCTTCAACCAGAAGATGGACGC-GAATGATCCGGAGAAGAAGATGCCC 51757
Query 122782 TCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCA 122840
|| | ||||| || | || || ||| |||| |||| ||| | | |||
Sbjct 51756 TCGATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGG-TCGAGTTCTTGTCGGAGATCCA 51698
Query 122841 TTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAA 122900
| || ||||| | |||||||| || ||||| | | | |||||| | || |
Sbjct 51697 TCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAGAG 51638
Query 122901 CTGC-TTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGC 122959
| | | | || | | || | |||||| | || || | || ||||| |||
Sbjct 51637 GTACGTGCGTTGCTTGGGC-TCGCTGATGTATGTATCGATGAGGAGGGAGTATGTCTCGG 51579
Query 122960 CATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGA 123018
|| | | | ||| || | ||| | ||||||| |||| || ||| |||||
Sbjct 51578 AGTGGATGTTCTCCATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGC 51520
Query 123019 ACCTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 123077
||||| ||| | || | | | ||| |||||| || ||||||||||| |||| ||
Sbjct 51519 ACCTC-TCCACTGAAGCGCTCAATGAGGTTCTCATTGACGATTCCATCGGAGGCAGCGAA 51461
Query 123078 GAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAGG---GTCTTCCAGTC 123134
||| ||||||| || ||||| || | || || ||| | ||||||||
Sbjct 51460 GAAGGCCAGGACGTGAGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCCAGTC 51401
Query 123135 GTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173
|| |||||| ||||||| ||| | || || || |||||
Sbjct 51400 GTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCA 51362
>seq1589
Length=144912
Score = 111 bits (122), Expect = 2e-19
Identities = 467/720 (65%), Gaps = 18/720 (3%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||||||||| | |||||||| || ||||| || || ||||| ||| || | ||||||
Sbjct 47989 GTAGATGTTGCTGGTGTATGGCTCGAAGCACTCGTTGAAACCCATGATCTGCGAGGTGGA 47930
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826
|| || ||||| || || | | || ||| |||| ||| | ||| ||| |
Sbjct 47929 TGCAGTCGGCATGGGAGCGACGAGGAGCGAGTTGCGAACACCGTGCTCGGCGATCTTGGC 47870
Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATGTCAAACTGA 110884
|||||| | ||||||| || || | | || |||| |||||||||| |||||
Sbjct 47869 CTTGAGTGCGGCCCAGTCCCAGA-GATCAGTGGGAGTCACAC-CCCACATGTCGTACTGA 47812
Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTT--CAG 110942
||| | || | ||| ||||||| ||||| | || || || | || | ||| |||
Sbjct 47811 AGCTCGCCCTTGGAAACGGGAGAGCCCTCGTATGTCTCGTATGGTCCAAG--CTTAGCAG 47754
Query 110943 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002
| | || || || || | |||||||| ||||| || ||||| || || |
Sbjct 47753 CGAGATCGCATGAAGCGGTGAGAGCAGCGTGATAGATGGTCTCGAAGATCTGAATGTTGA 47694
Query 111003 TCTCCTTGGCTTCATCTGAATC-AAATGCGTAGCGGCACAA--AATAAATACATCCGCGA 111059
|| || ||| || || ||| || | ||| || | || ||| |||| || |
Sbjct 47693 GCTGGCGAGCCTCAGGAGAGTCGAAAGGCAT-GCG-CAGAGCCAAGAAAG-CATCGGCAA 47637
Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 111118
|||| | ||||| | ||| || || | ||| || | || ||| || || |||
Sbjct 47636 GACCGTTGACACCGAGACCGATGGGACGGTGACGGAAGTTGCTCTTGCGAGCC-TCTGGC 47578
Query 111119 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 111178
|| || || || || |||| ||| | || ||||| || | | ||||
Sbjct 47577 ACTGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTGGTGACGGTTTGAGTGACC 47518
Query 111179 TCATGAAGTTTTTCATAATCAAAAGTGCGAGT-CTCTTCATTGACATACTTTGGAAGGGC 111237
| || || || ||| | || ||| || || ||| | ||| || | || |||||
Sbjct 47517 TGGTGGAGCTTGTCAAAGTCGAAAC-GCTCGTTCTCAATGTCGACGTAGGTGGGGAGGGC 47459
Query 111238 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 111297
|| ||||| | ||||| || || |||||| | | |||||||| | || || ||
Sbjct 47458 GAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCGGT 47399
Query 111298 ACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGC 111357
|| | |||||| || || |||||||| ||||| ||||| ||||| |||| ||
Sbjct 47398 GCAGAGGTTGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTGCCGTTGGCAGC 47339
Query 111358 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417
||||||||||| ||||| ||||| || ||||| ||||| | | ||| || || | |||
Sbjct 47338 GTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCGTACCA 47279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628003165480800
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