Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1655 129 7e-25 seq1589 111 2e-19 >seq1655 Length=66175 Score = 129 bits (142), Expect = 7e-25 Identities = 530/819 (65%), Gaps = 29/819 (4%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| ||||| |||||||| ||||||||||| || || | ||| ||||| |||||| Sbjct 52167 TAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTGCCTCCGAGGGAGATGTTCTCCATA 52108 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 122485 ||||| || || || | ||||| | ||| || || | | ||||| Sbjct 52107 AAGTCGAAGGGGTTTGTGGCGTTGTAGTGCTTCTGGTTG-----CCGAGTGCCAGGAGGA 52053 Query 122486 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGT 122545 |||| || | || |||| ||||||| | |||| || | |||||| |||| ||| Sbjct 52052 GACGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCG 51993 Query 122546 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605 ||||||||| ||||| || ||| | | ||| || |||| ||||| | | |||| Sbjct 51992 CACATGGGAGGGCGTCTGTGAGAAACTCCTGCTCGATGACAACGGCCTCGGTGATGATGT 51933 Query 122606 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACG---GCAA 122662 | | | | | | | | || | || | || | | ||| | || | || | Sbjct 51932 CTTCAACAACCTGGTTTGATGGCTTGTT--GTTGAGG-TGGGAGAACAGCAGGCAGGCGA 51876 Query 122663 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCA 122722 | || ||| | ||||| || ||||| || || || || |||||| || || |||| Sbjct 51875 AGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCA 51816 Query 122723 TGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCC 122781 ||||||| |||||||||||||| | || | ||| |||||| |||||||||||||| ||| Sbjct 51815 TGAGACCACGCTTCTTCAACCAGAAGATGGACGC-GAATGATCCGGAGAAGAAGATGCCC 51757 Query 122782 TCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCA 122840 || | ||||| || | || || ||| |||| |||| ||| | | ||| Sbjct 51756 TCGATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGG-TCGAGTTCTTGTCGGAGATCCA 51698 Query 122841 TTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAA 122900 | || ||||| | |||||||| || ||||| | | | |||||| | || | Sbjct 51697 TCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAGAG 51638 Query 122901 CTGC-TTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGC 122959 | | | | || | | || | |||||| | || || | || ||||| ||| Sbjct 51637 GTACGTGCGTTGCTTGGGC-TCGCTGATGTATGTATCGATGAGGAGGGAGTATGTCTCGG 51579 Query 122960 CATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGA 123018 || | | | ||| || | ||| | ||||||| |||| || ||| ||||| Sbjct 51578 AGTGGATGTTCTCCATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGC 51520 Query 123019 ACCTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 123077 ||||| ||| | || | | | ||| |||||| || ||||||||||| |||| || Sbjct 51519 ACCTC-TCCACTGAAGCGCTCAATGAGGTTCTCATTGACGATTCCATCGGAGGCAGCGAA 51461 Query 123078 GAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAGG---GTCTTCCAGTC 123134 ||| ||||||| || ||||| || | || || ||| | |||||||| Sbjct 51460 GAAGGCCAGGACGTGAGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCCAGTC 51401 Query 123135 GTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 || |||||| ||||||| ||| | || || || ||||| Sbjct 51400 GTGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCA 51362 >seq1589 Length=144912 Score = 111 bits (122), Expect = 2e-19 Identities = 467/720 (65%), Gaps = 18/720 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||||||| | |||||||| || ||||| || || ||||| ||| || | |||||| Sbjct 47989 GTAGATGTTGCTGGTGTATGGCTCGAAGCACTCGTTGAAACCCATGATCTGCGAGGTGGA 47930 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || || ||||| || || | | || ||| |||| ||| | ||| ||| | Sbjct 47929 TGCAGTCGGCATGGGAGCGACGAGGAGCGAGTTGCGAACACCGTGCTCGGCGATCTTGGC 47870 Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATGTCAAACTGA 110884 |||||| | ||||||| || || | | || |||| |||||||||| ||||| Sbjct 47869 CTTGAGTGCGGCCCAGTCCCAGA-GATCAGTGGGAGTCACAC-CCCACATGTCGTACTGA 47812 Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTT--CAG 110942 ||| | || | ||| ||||||| ||||| | || || || | || | ||| ||| Sbjct 47811 AGCTCGCCCTTGGAAACGGGAGAGCCCTCGTATGTCTCGTATGGTCCAAG--CTTAGCAG 47754 Query 110943 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002 | | || || || || | |||||||| ||||| || ||||| || || | Sbjct 47753 CGAGATCGCATGAAGCGGTGAGAGCAGCGTGATAGATGGTCTCGAAGATCTGAATGTTGA 47694 Query 111003 TCTCCTTGGCTTCATCTGAATC-AAATGCGTAGCGGCACAA--AATAAATACATCCGCGA 111059 || || ||| || || ||| || | ||| || | || ||| |||| || | Sbjct 47693 GCTGGCGAGCCTCAGGAGAGTCGAAAGGCAT-GCG-CAGAGCCAAGAAAG-CATCGGCAA 47637 Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 111118 |||| | ||||| | ||| || || | ||| || | || ||| || || ||| Sbjct 47636 GACCGTTGACACCGAGACCGATGGGACGGTGACGGAAGTTGCTCTTGCGAGCC-TCTGGC 47578 Query 111119 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 111178 || || || || || |||| ||| | || ||||| || | | |||| Sbjct 47577 ACTGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTGGTGACGGTTTGAGTGACC 47518 Query 111179 TCATGAAGTTTTTCATAATCAAAAGTGCGAGT-CTCTTCATTGACATACTTTGGAAGGGC 111237 | || || || ||| | || ||| || || ||| | ||| || | || ||||| Sbjct 47517 TGGTGGAGCTTGTCAAAGTCGAAAC-GCTCGTTCTCAATGTCGACGTAGGTGGGGAGGGC 47459 Query 111238 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 111297 || ||||| | ||||| || || |||||| | | |||||||| | || || || Sbjct 47458 GAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCGGT 47399 Query 111298 ACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGC 111357 || | |||||| || || |||||||| ||||| ||||| ||||| |||| || Sbjct 47398 GCAGAGGTTGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTGCCGTTGGCAGC 47339 Query 111358 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 ||||||||||| ||||| ||||| || ||||| ||||| | | ||| || || | ||| Sbjct 47338 GTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCGTACCA 47279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628003165480800