Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1655 183 4e-41
seq1589 141 1e-28
>seq1655
Length=66175
Score = 183 bits (202), Expect = 4e-41
Identities = 542/818 (66%), Gaps = 27/818 (3%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || || ||||||||||||||||| || || || | | | ||| |||||||||
Sbjct 52167 TAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTGCCTCCGAGGGAGATGTTCTCCATA 52108
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAAT--CTGTTTGAGGAGA 129844
|| || || ||||| | | ||| | | |||| | | | | | |||||||
Sbjct 52107 AAGTCGAAGGGGTTTGTGGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAG---GAGGAGA 52051
Query 129845 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTA 129904
|| || | |||| |||| ||||||| |||| || || |||||| |||| ||| |
Sbjct 52050 CGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCGCA 51991
Query 129905 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCG 129964
|||||||| ||||| || ||| ||| ||| ||| | || || || | |||| |
Sbjct 51990 CATGGGAGGGCGTCTGTGAGAAACTCCTGCTCGATGACAACGGCCTCGGTGATGATGTCT 51931
Query 129965 TGAA-----TGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAA 130019
| || |||| | || | || | ||| | | ||| || ||| |
Sbjct 51930 TCAACAACCTGGTTTGA-TGGCTTGT-TGTTGAGGTGGGA---GAACAGCAGGCAGGCGA 51876
Query 130020 ACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 130079
| || ||| | |||||||||||||||||||| || || |||||| || || ||||
Sbjct 51875 AGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCA 51816
Query 130080 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 130139
||||||| ||||||||||||||||| || | ||||| || ||||||||||| ||||
Sbjct 51815 TGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCGGAGAAGAAGATGCCCT 51756
Query 130140 CCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACCAC 130198
| | || || || | |||||| ||||||| || | |||| | | |||
Sbjct 51755 CGATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGG-TCGAGTTCTTGTCGGAGATCCAT 51697
Query 130199 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA-G 130257
|| |||||| | ||||| || ||| || |||| | | | ||| || | |||| |
Sbjct 51696 CGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAGAGG 51637
Query 130258 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 130317
| | | | || || || || ||||||| |||| ||||| || ||||| |||
Sbjct 51636 TACGTGCGTTGCT-TGGGCTCGCTGATGTATGTATCGATGAGGAGGGAGTATGTCTCGGA 51578
Query 130318 ATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 130376
|||| | | ||| ||| || || ||||||| |||| || ||| ||||| |
Sbjct 51577 GTGGATGTTCTCCATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCCTCGGGGATCTGCA 51519
Query 130377 CCTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAA 130435
|||| || | || | | | ||| |||||| || ||||||||||| |||| ||
Sbjct 51518 CCTC-TCCACTGAAGCGCTCAATGAGGTTCTCATTGACGATTCCATCGGAGGCAGCGAAG 51460
Query 130436 AACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG---GTCTTCCAGTCG 130492
|| ||||||| | ||||| | || | ||||| ||| | |||||||||
Sbjct 51459 AAGGCCAGGACGTGAGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCCAGTCG 51400
Query 130493 TCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
| ||||||||| || ||||| | |||||| || |||||
Sbjct 51399 TGAAGATCCTTGGACAGATCGATCTCCTCGGCGGTCCA 51362
>seq1589
Length=144912
Score = 141 bits (156), Expect = 1e-28
Identities = 921/1462 (63%), Gaps = 37/1462 (3%)
Strand=Plus/Minus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| ||| | ||||||||||| |||||||| ||| ||||| ||| || | |||||
Sbjct 47988 TAGATGTTGCTGGTGTATGGCTCGAAGCACTCGTTGAAACCCATGATCTGCGAGGTGGAT 47929
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| || |||||||| || | ||| || ||| || | ||| | || || ||
Sbjct 47928 GCAGTCGGCATGGGAGCGACGAGGAGCGAGTTGCGAACACCGTGCTCGGCGATCTTGGCC 47869
Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTG----TCTCCCCCTGCCACATATCAAACTG 118357
||||| ||| ||||||| || || | || || | ||| ||||| || ||||
Sbjct 47868 TTGAGTGCGGCCCAGTCCCAGA-GATCAGTGGGAGTCACACCC---CACATGTCGTACTG 47813
Query 118358 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCT---C 118414
|| || | ||| | || || ||||| ||||||| ||||| || || || |
Sbjct 47812 AAGCTCGCCCTTGGAAACGGGAGAGCCCTCGTATGTCTCGTATGGTCC---AAGCTTAGC 47756
Query 118415 CGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATT 118474
|| | ||| | || ||| || |||||||| || || || || || || ||
Sbjct 47755 AGCGAGATCGCATGAAGCGGTGAGAGCAGCGTGATAGATGGTCTCGAAGATCTGAATGTT 47696
Query 118475 CAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA--AATAAATACATCCGC 118531
| || | | |||| || || || | | || || | || ||| |||| ||
Sbjct 47695 GAGCTGGCGAG-CCTCAGGAGAGTCGAAAGGCATGCG-CAGAGCCAAGAAAG-CATCGGC 47639
Query 118532 GAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC 118591
||||| | ||||||||| || || || || || | | || ||| ||||| |||
Sbjct 47638 AAGACCGTTGACACCGAGACCGATGGGACGGTGACGGAAGTTGCTCTTGCGAGCC-TCTG 47580
Query 118592 -CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 118650
||| || || || ||||| | | | || | || |||||||| | ||||
Sbjct 47579 GCACTGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTGGTGACGGTTTGAGTGA 47520
Query 118651 TTTCATGAAGCTTTTCGTAATCAAAACTGCGAGT-CTCTTCATTGACATACTTAGGAAGG 118709
| || ||||| || | || |||| || || ||| | ||| || | || |||
Sbjct 47519 CCTGGTGGAGCTTGTCAAAGTCGAAAC-GCTCGTTCTCAATGTCGACGTAGGTGGGGAGG 47461
Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769
|||| || || || || ||||| | | |||||| | |||||||||| || || ||
Sbjct 47460 GCGAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGATGATCTCG 47401
Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829
||||| | ||| || || ||||| ||||||||||| || || ||| |||
Sbjct 47400 GTGCAGAGGTTGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTGCCGTTGGCA 47341
Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889
|| |||||||| || ||||||||||| || ||||| || || | || ||| || || | |
Sbjct 47340 GCGTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCGTAC 47281
Query 118890 CAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948
|||| | || | ||| | || || | | ||||| |||||| |||
Sbjct 47280 CAGAGCTTCTG-AGCGCGGACTGTCTCACGACCCTTGCCCTCACGCTCGTATCGCTCGTA 47222
Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008
|| | || ||||| | || | | || | || || || || | ||||| |
Sbjct 47221 CAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAGGGCACAT 47162
Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068
| || ||| || |||||| ||||||||||| || || || | |||||| |
Sbjct 47161 CAAAGTCCAAGTGGTGTTCTGCTCAACACGCTTCATGAACAGATCAGGCACCCAGAGACC 47102
Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128
|||| | ||| || ||| | || || | || || || || | ||||| ||
Sbjct 47101 GTAGAACAAATCGCGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAA 47042
Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG--- 119185
| | || ||| |||||||| || || | ||||| |||| | || | | ||
Sbjct 47041 GGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCGAAAGCACC---AGGTCGCTT 46985
Query 119186 ---ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGAT 119242
|| |||||| || || | || ||| |||||| ||||| ||||| || | ||
Sbjct 46984 GTTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAG 46925
Query 119243 ACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGAT 119302
||| | |||| || ||||| || | || | | | || | || ||| |
Sbjct 46924 ACCGTTGGATGTTCCGTTTGTACCGCTGATGTATGCTCCAGTCGCGCGGATGCGGTGAAC 46865
Query 119303 GTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTA 119362
|| | || || || || || ||| ||||| ||||| | | | || ||||
Sbjct 46864 GTTGAGTCCGATGCCGCCAGCGTTCTTGGAGATCATGGCGCAGGTCTTCAAGGTGTCGTA 46805
Query 119363 GATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCT 119422
||| ||||| || |||| |||| | |||||||||||||| | || |||| |
Sbjct 46804 GATGCCATCAATGCTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGAGCGTT 46745
Query 119423 GGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCT 119481
|||||| || ||| |||| || || || | || || |||| ||| | | ||||| |
Sbjct 46744 GGGTGTTCCGGCGCTGAACAGCGTAGGCGAAGCATGTGTGAA-GTACTTGTTCGACATGT 46686
Query 119482 TGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCA 119541
|| ||||||||| | | | | |||||| || ||||| || || | | || ||||
Sbjct 46685 AGTTGTAGGTCTCAATGGCAGACTCAATGTCATCACCGTGGATGCCAACAGCAACACGCA 46626
Query 119542 TAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCT 119601
| | ||| | ||| ||| | || | | || | || |||| | ||||| |||
Sbjct 46625 TGATCATCTGTTGTGGTCTCTCGGCAACCTTGCCGTTGATCCTCAGAAGGTATGATCTCT 46566
Query 119602 CCAAGGTCTTGAGACCAAAATA 119623
||| ||||||| ||||| ||
Sbjct 46565 CCAGCGTCTTGAATCCAAAGTA 46544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618406806093880
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