Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2722 150 5e-31 seq3230 109 2e-18 >seq2722 Length=207625 Score = 150 bits (166), Expect = 5e-31 Identities = 474/730 (65%), Gaps = 11/730 (2%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || ||||| || ||||| || || || ||||| | | | | |||| || Sbjct 120176 GCAATCGGTATCGACTTGGGTACGACCTACTCATGTGTGGGCATCTACAGAGATGACCGC 120235 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | || || || || || || || |||||| | ||||| || || | ||| || || ||| Sbjct 120236 ATTGAGATCATCGCCAACGACCAGGGTAACCGCACAACACCCTCGTTCGTCGCCTTCACC 120295 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||||| | || ||||| || ||||| ||||||| || || ||| || Sbjct 120296 GACACCGAGCGCCTCATCGGTGACTCCGCAAAGAATCAAGTCGCCATGAACCCAGTCAAC 120355 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACA---CA 349434 || || || || || ||||| || || || | ||||| ||| | || || Sbjct 120356 ACAGTCTTCGACGCCAAGCGCCTGATCGGCCGGAAGTTC----GACGATGCTGAGGTGCA 120411 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 | || | || ||||| || || | || | ||| | | |||| || || | | Sbjct 120412 GGCCGACATGAAGCATTTCCCCTTCAAGGTCAT--CAACA-AGGGTGGCAAGCCGGTGGT 120468 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 | || || | || || || | || || || ||| || || || ||||||||||| Sbjct 120469 ACAAGTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCATCAATGGT 120528 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | || ||| || | ||| || ||||| | |||| ||||| | ||||||| Sbjct 120529 CCTCACCAAGATGCGCGAGACTGCGGAGGCATACCTTGGTGGCACAGTCAACAATGCTGT 120588 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 | ||||| ||||| || || || || | ||||| || || || |||||||| Sbjct 120589 CGTCACTGTCCCAGCATACTTCAACGACTCTCAGCGCCAAGCGACCAAGGATGCTGGTCT 120648 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 ||| || || | || || || | || || || || || || || || |||||||| || Sbjct 120649 CATCGCCGGCCTGAACGTCCTGCGCATCATCAACGAGCCTACCGCCGCTGCAATTGCCTA 120708 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || || || || | || || || || | || || || || || |||||||| Sbjct 120709 CGGTCTCGACAAGAAGACCGAGGGCGAGCGCAACGTGCTCATCTTCGACTTGGGTGGTGG 120768 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||| |||||||| || || || || | || ||||| || || || || || | ||||| Sbjct 120769 TACCTTTGATGTTTCTCTTCTTACCATCGAGGAGGGCATCTTCGAGGTCAAGTCCACTGC 120828 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 ||| ||||| || | ||||| || || || || || || ||||| || || || || Sbjct 120829 TGGAGATACCCACTTGGGTGGCGAGGACTTCGACAACCGCCTCGTCAACCACTTCGTAAA 120888 Query 349915 AGAATTTAAG 349924 ||||| ||| Sbjct 120889 CGAATTCAAG 120898 >seq3230 Length=199858 Score = 109 bits (120), Expect = 2e-18 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || ||||| ||||| || || || || || || Sbjct 170331 CATACCACCACGGAGGCGGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTC 170272 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | || |||||||| ||||| || ||||| || ||||| || || ||||| || || Sbjct 170271 GCTGAGGGTGCGCCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGG 170212 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 |||||| || || || || ||||| || ||| || ||||| || || | ||| || | | Sbjct 170211 AGGAATGCCCTCCTTGTCTTGAATCTT-GCTCTTCACATTGTCGATGGTATCCGAGGACT 170153 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719 | || ||||| || | |||||||| || | ||| Sbjct 170152 CGACCTCAAGCGTGATGGTCTTTCCAGTCACTGT 170119 Score = 105 bits (116), Expect = 2e-17 Identities = 170/243 (70%), Gaps = 1/243 (0%) Strand=Plus/Minus Query 140495 ACTAATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTG 140554 || ||||||| |||||||||||| | | || || ||||| ||||| || || || || Sbjct 170570 ACGAATATTTG-CATACCACCACGAAGGCGGAGGACGAGATGGAGAGTCGATTCCTTCTG 170512 Query 140555 AATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACG 140614 || || || || || | || || || ||||| ||||| || || || ||||| | || Sbjct 170511 GATGTTGTAGTCGGAGAGCGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAATCG 170452 Query 140615 TTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGA 140674 || || || || ||||| || || || ||||| || || | || ||||| || || | Sbjct 170451 CTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGT 170392 Query 140675 ATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTG 140734 || || | || || || | || | ||||| ||||| || || || || || ||||| Sbjct 170391 GTCCGACGACTCCACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTG 170332 Query 140735 CAT 140737 ||| Sbjct 170331 CAT 170329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515183091654419