Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq2722 150 5e-31
seq3230 109 2e-18
>seq2722
Length=207625
Score = 150 bits (166), Expect = 5e-31
Identities = 474/730 (65%), Gaps = 11/730 (2%)
Strand=Plus/Plus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
|| || || ||||| || ||||| || || || ||||| | | | | |||| ||
Sbjct 120176 GCAATCGGTATCGACTTGGGTACGACCTACTCATGTGTGGGCATCTACAGAGATGACCGC 120235
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
| || || || || || || || |||||| | ||||| || || | ||| || || |||
Sbjct 120236 ATTGAGATCATCGCCAACGACCAGGGTAACCGCACAACACCCTCGTTCGTCGCCTTCACC 120295
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| || ||||| | || ||||| || ||||| ||||||| || || ||| ||
Sbjct 120296 GACACCGAGCGCCTCATCGGTGACTCCGCAAAGAATCAAGTCGCCATGAACCCAGTCAAC 120355
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACA---CA 349434
|| || || || || ||||| || || || | ||||| ||| | || ||
Sbjct 120356 ACAGTCTTCGACGCCAAGCGCCTGATCGGCCGGAAGTTC----GACGATGCTGAGGTGCA 120411
Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494
| || | || ||||| || || | || | ||| | | |||| || || | |
Sbjct 120412 GGCCGACATGAAGCATTTCCCCTTCAAGGTCAT--CAACA-AGGGTGGCAAGCCGGTGGT 120468
Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554
| || || | || || || | || || || ||| || || || |||||||||||
Sbjct 120469 ACAAGTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCATCAATGGT 120528
Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614
| || ||| || | ||| || ||||| | |||| ||||| | |||||||
Sbjct 120529 CCTCACCAAGATGCGCGAGACTGCGGAGGCATACCTTGGTGGCACAGTCAACAATGCTGT 120588
Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674
| ||||| ||||| || || || || | ||||| || || || ||||||||
Sbjct 120589 CGTCACTGTCCCAGCATACTTCAACGACTCTCAGCGCCAAGCGACCAAGGATGCTGGTCT 120648
Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734
||| || || | || || || | || || || || || || || || |||||||| ||
Sbjct 120649 CATCGCCGGCCTGAACGTCCTGCGCATCATCAACGAGCCTACCGCCGCTGCAATTGCCTA 120708
Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794
|| || || || | || || || || | || || || || || ||||||||
Sbjct 120709 CGGTCTCGACAAGAAGACCGAGGGCGAGCGCAACGTGCTCATCTTCGACTTGGGTGGTGG 120768
Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854
||| |||||||| || || || || | || ||||| || || || || || | |||||
Sbjct 120769 TACCTTTGATGTTTCTCTTCTTACCATCGAGGAGGGCATCTTCGAGGTCAAGTCCACTGC 120828
Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914
||| ||||| || | ||||| || || || || || || ||||| || || || ||
Sbjct 120829 TGGAGATACCCACTTGGGTGGCGAGGACTTCGACAACCGCCTCGTCAACCACTTCGTAAA 120888
Query 349915 AGAATTTAAG 349924
||||| |||
Sbjct 120889 CGAATTCAAG 120898
>seq3230
Length=199858
Score = 109 bits (120), Expect = 2e-18
Identities = 154/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || | || ||||| ||||| || || || || || ||
Sbjct 170331 CATACCACCACGGAGGCGGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTC 170272
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
| || |||||||| ||||| || ||||| || ||||| || || ||||| || ||
Sbjct 170271 GCTGAGGGTGCGCCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGG 170212
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685
|||||| || || || || ||||| || ||| || ||||| || || | ||| || | |
Sbjct 170211 AGGAATGCCCTCCTTGTCTTGAATCTT-GCTCTTCACATTGTCGATGGTATCCGAGGACT 170153
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719
| || ||||| || | |||||||| || | |||
Sbjct 170152 CGACCTCAAGCGTGATGGTCTTTCCAGTCACTGT 170119
Score = 105 bits (116), Expect = 2e-17
Identities = 170/243 (70%), Gaps = 1/243 (0%)
Strand=Plus/Minus
Query 140495 ACTAATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTG 140554
|| ||||||| |||||||||||| | | || || ||||| ||||| || || || ||
Sbjct 170570 ACGAATATTTG-CATACCACCACGAAGGCGGAGGACGAGATGGAGAGTCGATTCCTTCTG 170512
Query 140555 AATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACG 140614
|| || || || || | || || || ||||| ||||| || || || ||||| | ||
Sbjct 170511 GATGTTGTAGTCGGAGAGCGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAATCG 170452
Query 140615 TTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGA 140674
|| || || || ||||| || || || ||||| || || | || ||||| || || |
Sbjct 170451 CTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGT 170392
Query 140675 ATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTG 140734
|| || | || || || | || | ||||| ||||| || || || || || |||||
Sbjct 170391 GTCCGACGACTCCACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTG 170332
Query 140735 CAT 140737
|||
Sbjct 170331 CAT 170329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515183091654419
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |