Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1589 187 3e-42
seq2039 123 3e-23
>seq1589
Length=144912
Score = 187 bits (206), Expect = 3e-42
Identities = 501/752 (67%), Gaps = 12/752 (2%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| || || | || ||||||||||| ||| | || | |||||| |||
Sbjct 46623 TCATGCGTGTTGCTGTTGGCATCCACGGTGATGACATTGAGTCTGCCATTGAGACCTACA 46682
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
||| ||| | |||||||| || || || |||| || ||||||| ||| || ||
Sbjct 46683 ACTACATGTCGAACAAGTACTTCACACATGCTTCGCCTACGCTGTTCAGCGCCGGAACAC 46742
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
|| ||||| || | ||||||||| | | |||||||||||| || || ||||
Sbjct 46743 CCAACGCTCAGCTGGCATCCTGCTTCCTCATCGACATGAAGGATGACAGCATTGATGGCA 46802
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
||||||| || | ||| || ||| ||||||||| | || || ||||| ||
Sbjct 46803 TCTACGACACCTTGAAGACCTGCGCCATGATCTCCAAGAACGCTGGCGGCATCGGACTCA 46862
Query 53433 ACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490
|| | || | || |||| |||| || || |||| || || ||||| || |
Sbjct 46863 AC-GTTC-ACCGCATCCGCGCGACTGGAGCATACATCAGCGGTACAAACGGAACATCCAA 46920
Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550
|| |||| || ||||| || || || |||||||| || || |||||| ||||||| ||
Sbjct 46921 CGGTCTCGTACCCATGCTGCGTGTGTTTAACAACACCGCTCGCTACGTCGACCAGGGCGG 46980
Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610
||||| || | |||||||| ||| ||||||| |||||||| || | |
Sbjct 46981 CAACAAGCGACCTGGTGCTTTCGCCATGTACATCGAGCCATGGCACGCAGATGTCTTCTC 47040
Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TA 53669
|| | || || || ||| || || | || ||| | || ||| || |||| ||
Sbjct 47041 CTTCTTGGATCTCCGCAAGAACCACGGAAAGGAGGAGGTTCGTGCCCGCGATTTGTTCTA 47100
Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC- 53728
| | ||| ||| | || || || |||||| | || ||| || || | | | | ||
Sbjct 47101 C-GGTCTCTGGGTGCCTGATCTGTTCATGAAGCGTGTTGAGCAGAAC-ACCACTTGGACT 47158
Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788
|||||||||| ||||||||||||| || | ||||||||| | ||||| | |||
Sbjct 47159 TTGATGTGCCCTCACGAGTGCCCCGGTCTGGCTGATGTCTACGGCGCTGAGTTCGAGGAG 47218
Query 53789 ATGTATCGGACG-TACGCAGTTCAGGGC-CGCTACAAGAAGAAGGTCAAGGCGCGTGAGG 53846
|||| || || |||| | ||||| | | | ||| ||| || | ||
Sbjct 47219 CTGTA-CGAGCGATACGAGCGTGAGGGCAAGGGTCGTG-AGACAGTCCGCGCTCAGAAGC 47276
Query 53847 TATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGG 53906
| ||| | || |||||| || ||| ||||| || ||||| ||||| ||||||||
Sbjct 47277 TCTGGTACGCCATCCTCGAGGCTCAGACCGAGACCGGCACGCCATACATCCTCTACAAGG 47336
Query 53907 ATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
| | | ||||| ||||||||||||||||||
Sbjct 47337 ACGCTGCCAACGGCAAGAGCAACCAGAAGAAC 47368
>seq2039
Length=622076
Score = 123 bits (136), Expect = 3e-23
Identities = 299/450 (66%), Gaps = 2/450 (0%)
Strand=Plus/Plus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
|| ||||| || || || || ||||||| || ||||| || || || ||| ||| | |
Sbjct 529614 CCCGTACCAATACCATCAGCGCCGTTGATGAGGATCATGGGAACGATCGGGATGTACATC 529673
Query 151936 TCCGGCTCCACC-TGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGG 151994
|| ||||| | | | ||| |||||||| | ||| |||| | | | ||| | | |
Sbjct 529674 TCGGGCTCGATCGTCTTG-CCGTCATCAGTATTGTAGGTCAACAACGCCTCGTCGGTCTG 529732
Query 151995 ATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGC 152054
|| ||| | || ||| | | ||| || | |||| ||||||| || | |||||| ||
Sbjct 529733 ATGGAAGAGCCTTCGGGCAAAGGGAGACAGTCTCGTGTAGATGTAACGTGCGCTGGCAGC 529792
Query 152055 ATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTT 152114
|| | ||||| || || | || || | || ||| ||||| | ||||| |||
Sbjct 529793 GTCGCTTCCACCCTGCAATCGAGAACCGAAATTGCCGCTGGGTTCGAGAATGTTGATGTT 529852
Query 152115 GTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACC 152174
||| | || || ||| ||||||||| | || || || |||||| || ||| ||
Sbjct 529853 GTTTGAACCGACAAAAGTCTGAGCCAGACCAACGATAGTCTGCTGCAGTGACGTTTCCCC 529912
Query 152175 GTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGT 152234
|| || || ||| || | | || | || || | || | ||||||| | ||| |
Sbjct 529913 GTACGAGTATGCTGTCAGCCCTGAGACCGAGCCAGCAAGCTCCACCACCTTGACGTCTTT 529972
Query 152235 CGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGTC 152294
| |||||||| || ||| | ||| || ||||||||||| |||||| | ||||||
Sbjct 529973 CTTCAGGTTCCGTCGGAAACAAGTGTACATTACCTTGCGCTGACCTGGTTTGAGACCGTC 530032
Query 152295 CACCACGTGAGGAATCGAACGCTTGATGTC 152324
|| || ||||| || ||| || ||||
Sbjct 530033 AACGACAGAGGGAATGGATCGCATGTTGTC 530062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547190875945400
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