Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1589 187 3e-42 seq2039 123 3e-23 >seq1589 Length=144912 Score = 187 bits (206), Expect = 3e-42 Identities = 501/752 (67%), Gaps = 12/752 (2%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || || | || ||||||||||| ||| | || | |||||| ||| Sbjct 46623 TCATGCGTGTTGCTGTTGGCATCCACGGTGATGACATTGAGTCTGCCATTGAGACCTACA 46682 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 ||| ||| | |||||||| || || || |||| || ||||||| ||| || || Sbjct 46683 ACTACATGTCGAACAAGTACTTCACACATGCTTCGCCTACGCTGTTCAGCGCCGGAACAC 46742 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 || ||||| || | ||||||||| | | |||||||||||| || || |||| Sbjct 46743 CCAACGCTCAGCTGGCATCCTGCTTCCTCATCGACATGAAGGATGACAGCATTGATGGCA 46802 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| || | ||| || ||| ||||||||| | || || ||||| || Sbjct 46803 TCTACGACACCTTGAAGACCTGCGCCATGATCTCCAAGAACGCTGGCGGCATCGGACTCA 46862 Query 53433 ACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || | || | || |||| |||| || || |||| || || ||||| || | Sbjct 46863 AC-GTTC-ACCGCATCCGCGCGACTGGAGCATACATCAGCGGTACAAACGGAACATCCAA 46920 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || |||| || ||||| || || || |||||||| || || |||||| ||||||| || Sbjct 46921 CGGTCTCGTACCCATGCTGCGTGTGTTTAACAACACCGCTCGCTACGTCGACCAGGGCGG 46980 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 ||||| || | |||||||| ||| ||||||| |||||||| || | | Sbjct 46981 CAACAAGCGACCTGGTGCTTTCGCCATGTACATCGAGCCATGGCACGCAGATGTCTTCTC 47040 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TA 53669 || | || || || ||| || || | || ||| | || ||| || |||| || Sbjct 47041 CTTCTTGGATCTCCGCAAGAACCACGGAAAGGAGGAGGTTCGTGCCCGCGATTTGTTCTA 47100 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC- 53728 | | ||| ||| | || || || |||||| | || ||| || || | | | | || Sbjct 47101 C-GGTCTCTGGGTGCCTGATCTGTTCATGAAGCGTGTTGAGCAGAAC-ACCACTTGGACT 47158 Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788 |||||||||| ||||||||||||| || | ||||||||| | ||||| | ||| Sbjct 47159 TTGATGTGCCCTCACGAGTGCCCCGGTCTGGCTGATGTCTACGGCGCTGAGTTCGAGGAG 47218 Query 53789 ATGTATCGGACG-TACGCAGTTCAGGGC-CGCTACAAGAAGAAGGTCAAGGCGCGTGAGG 53846 |||| || || |||| | ||||| | | | ||| ||| || | || Sbjct 47219 CTGTA-CGAGCGATACGAGCGTGAGGGCAAGGGTCGTG-AGACAGTCCGCGCTCAGAAGC 47276 Query 53847 TATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGG 53906 | ||| | || |||||| || ||| ||||| || ||||| ||||| |||||||| Sbjct 47277 TCTGGTACGCCATCCTCGAGGCTCAGACCGAGACCGGCACGCCATACATCCTCTACAAGG 47336 Query 53907 ATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 | | | ||||| |||||||||||||||||| Sbjct 47337 ACGCTGCCAACGGCAAGAGCAACCAGAAGAAC 47368 >seq2039 Length=622076 Score = 123 bits (136), Expect = 3e-23 Identities = 299/450 (66%), Gaps = 2/450 (0%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || ||||| || || || || ||||||| || ||||| || || || ||| ||| | | Sbjct 529614 CCCGTACCAATACCATCAGCGCCGTTGATGAGGATCATGGGAACGATCGGGATGTACATC 529673 Query 151936 TCCGGCTCCACC-TGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGG 151994 || ||||| | | | ||| |||||||| | ||| |||| | | | ||| | | | Sbjct 529674 TCGGGCTCGATCGTCTTG-CCGTCATCAGTATTGTAGGTCAACAACGCCTCGTCGGTCTG 529732 Query 151995 ATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGC 152054 || ||| | || ||| | | ||| || | |||| ||||||| || | |||||| || Sbjct 529733 ATGGAAGAGCCTTCGGGCAAAGGGAGACAGTCTCGTGTAGATGTAACGTGCGCTGGCAGC 529792 Query 152055 ATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTT 152114 || | ||||| || || | || || | || ||| ||||| | ||||| ||| Sbjct 529793 GTCGCTTCCACCCTGCAATCGAGAACCGAAATTGCCGCTGGGTTCGAGAATGTTGATGTT 529852 Query 152115 GTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACC 152174 ||| | || || ||| ||||||||| | || || || |||||| || ||| || Sbjct 529853 GTTTGAACCGACAAAAGTCTGAGCCAGACCAACGATAGTCTGCTGCAGTGACGTTTCCCC 529912 Query 152175 GTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGT 152234 || || || ||| || | | || | || || | || | ||||||| | ||| | Sbjct 529913 GTACGAGTATGCTGTCAGCCCTGAGACCGAGCCAGCAAGCTCCACCACCTTGACGTCTTT 529972 Query 152235 CGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGTC 152294 | |||||||| || ||| | ||| || ||||||||||| |||||| | |||||| Sbjct 529973 CTTCAGGTTCCGTCGGAAACAAGTGTACATTACCTTGCGCTGACCTGGTTTGAGACCGTC 530032 Query 152295 CACCACGTGAGGAATCGAACGCTTGATGTC 152324 || || ||||| || ||| || |||| Sbjct 530033 AACGACAGAGGGAATGGATCGCATGTTGTC 530062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547190875945400