Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1589 219 5e-52
seq3230 161 1e-34
seq2039 116 4e-21
seq2882 114 1e-20
seq2320 89.7 6e-13
>seq1589
Length=144912
Score = 219 bits (242), Expect = 5e-52
Identities = 803/1240 (65%), Gaps = 33/1240 (3%)
Strand=Plus/Minus
Query 80538 ACCCCACATGTCGTGCTGCAAGAT-GCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGT 80596
|||||||||||||| ||| ||| | ||||| || | ||||| ||| || | |||||||
Sbjct 47830 ACCCCACATGTCGTACTG-AAGCTCGCCCTTGGAAACGGGAGAGCCCTCGTATGTCTCGT 47772
Query 80597 ACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACT 80656
| || || | | || || || || || | | || || |||||||| ||| ||
Sbjct 47771 ATGGTCCAAGCTTAGCAGCGAGATCGCATGAAGCGGTGAGAGCAGCGTGATAGATGGTCT 47712
Query 80657 CAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCA 80716
| |||| |||| | ||| |||| || |||||| | || || || ||
Sbjct 47711 CGAAGATCTGAATGTTGAGCTGGCGAGCCTCAGGAGAGTCGAAAGGCATGCGCAGAGCCA 47652
Query 80717 TGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATC 80776
||| | || || || || | || |||| |||| || ||||| || ||| | ||
Sbjct 47651 AGAAAGCATCGGCAAGACCGTTGACACCGAGACCGATGGGACGGTGACGGAAGTT-GCTC 47593
Query 80777 GCTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTA 80835
|| ||||| || | |||||| ||| ||||||| ||||| ||| ||
Sbjct 47592 TTGCGAGCCTCTGGCACTGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTGGTG 47533
Query 80836 ACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTG---GTTCCCCTTCACAA-- 80890
|| | || || | || || || | ||||||||| | |||| | | | |
Sbjct 47532 ACGGTTTGAGTGACCTGGTGGAGCTTGTCAAAGTCGAAACGCTCGTTCTCAATGTCGACG 47473
Query 80891 -ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAAC 80949
| | || ||| || || || || ||||||||||| ||||| |||| | | || ||
Sbjct 47472 TAGGTGGGGAGGGCGAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTAC 47413
Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009
|||| ||| || ||||| | || || || || |||| ||| |||||||| |
Sbjct 47412 TCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTC 47353
Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069
||| ||||| ||||||||||||| ||||| || || ||||||||| ||| | || |
Sbjct 47352 TTGCCGTTGGCAGCGTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCG 47293
Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACA 81129
|||||||||| ||| | || | || ||| || || ||||| || | |
Sbjct 47292 AGGATGGCGTACCAGAGCTTCTGAGCGCGGACTGTCTCACGACCCTTGCCCTCACGCTCG 47233
Query 81130 TACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTC 81188
|| |||| ||| || ||||||| || |||| | |||| || | ||||||||
Sbjct 47232 TATCGCTCGTACAGC-TCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTC 47174
Query 81189 GTTAGGGCACATC-AGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAG 81247
|| |||||||||| | || | ||| ||||| | ||| ||| ||||||||| ||||
Sbjct 47173 GTGAGGGCACATCAAAGTCCAAGT-GGTGTTCTGCTCAACACGCTTCATGAACAGATCAG 47115
Query 81248 GGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGC 81307
| | |||||| || ||||| |||||| || ||||||| | || ||||| ||
Sbjct 47114 GCACCCAGAGACCGTAGAACAAATCGCGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGC 47055
Query 81308 GCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC 81366
| | || | ||| | || || || ||||||||||| | |||| ||||| | ||
Sbjct 47054 GGAGATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCGAAAGCAC 46995
Query 81367 -----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCA 81421
| |||| ||| ||||||| |||||| || || || |||||| |||||||
Sbjct 46994 CAGGTCGCTTG---TTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCA 46938
Query 81422 ACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGC 81481
||| || | || ||| | || ||||| ||||| ||| | || | ||||
Sbjct 46937 GCATGGGTACGAGACCGTTGGATGTTCCGTTTGTACCGCTGATGTATGCTCCAGTCGCGC 46878
Query 81482 GCACCTTGC--TGA---TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACA 81536
| | ||| ||| ||| || |||||||| || | ||| || ||| || ||
Sbjct 46877 GGA---TGCGGTGAACGTTG--AGTCCGATGCCGCCAGCGTTCTTGGAGATCATGGCGCA 46823
Query 81537 CCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACA 81596
|||| ||| || || || || || ||||| || | |||||||| | | ||| ||
Sbjct 46822 GGTCTTCAAGGTGTCGTAGATGCCATCAATGCTGTCATCCTTCATGTCGATGAGGAAGCA 46763
Query 81597 GCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAA 81656
| || || ||||| | | || ||||| ||||||| || || | || || ||||
Sbjct 46762 GGATGCCAGCTGAGCGTTGGGTGTTCCGGCGCTGAACAGCGTAGGCGAAGCATGTGTGAA 46703
Query 81657 ATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAAT 81716
|| ||| ||||| || ||||| || || | ||| || |||||||| ||
Sbjct 46702 GTACTTGTTCGACATGTAGTTGTAGGTCTCAATGGCAGACTCAATGTCATCACCGTGGAT 46643
Query 81717 ACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756
|| | ||| |||||||| | ||| | || || |||||
Sbjct 46642 GCCAACAGCAACACGCATGATCATCTGTTGTGGTCTCTCG 46603
>seq3230
Length=199858
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || || | ||||| |||||
Sbjct 170329 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACCTTGGAGGTGGAGTCGTCG 170388
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| | || || |||||||||||||| ||||| || |||||
Sbjct 170389 GACACCATCGACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAA 170448
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || || || || ||||||||||| || | ||| || || | ||||| ||
Sbjct 170449 CAGCGATTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGCACGCTCTCCGACTACAAC 170508
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||| ||||| ||||| ||| | || ||||| |||||
Sbjct 170509 ATCCAGAAGGAATCGACTCTCCATCTCGTCCTCCGCCTTCGTGGTGG 170555
Score = 140 bits (154), Expect = 4e-28
Identities = 155/204 (76%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| || ||||| || || |||||||| ||||| |||| ||| | ||| |||||
Sbjct 170125 ACTGGAAAGACCATCACGCTTGAGGTCGAGTCCTCGGATACCATCGACAATGTGAAGAGC 170184
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| ||||| ||||||||||| |||||||||||||||||||| || || || || || |||
Sbjct 170185 AAGATTCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCCTCATCTTCGCCGGAAAG 170244
Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608
|| || ||||||| || ||||| ||| ||||| || |||| ||||| |||||||| ||
Sbjct 170245 CAGCTTGAGGATGGGCGCACCCTCAGC-GACTACAACATCCAGAAGGAGTCCACTCTCCA 170303
Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632
| || | || || || |||||
Sbjct 170304 CTTGGTGCTCCGCCTCCGTGGTGG 170327
Score = 111 bits (122), Expect = 2e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || ||||||||||| || || || || ||||| |||
Sbjct 170557 ATGCAAATATTCGTCAAGACACTCACCGGCAAGACGATCACACTGGAAGTTGAATCATCA 170616
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || ||||| |||||||| ||||| || || || ||
Sbjct 170617 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGAATCCCACCGGATCAA 170676
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| || ||||| | || || || | || || ||
Sbjct 170677 CAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCTGATTACAAC 170736
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636
| || ||||| ||| || || | || | ||||| || || ||||||
Sbjct 170737 ATTCAGAAGGAGAGCACCCTGCACTTGGTGCTCCGTCTGCGTGGAGGACAA 170787
>seq2039
Length=622076
Score = 116 bits (128), Expect = 4e-21
Identities = 298/449 (66%), Gaps = 10/449 (2%)
Strand=Plus/Minus
Query 31959 CAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATA 32018
|| ||| |||||||| || | ||||| ||||| || ||||||||||| || ||
Sbjct 530057 CATGCGATCCATTCCCTCTGTCGTTGACGGTCTCAAACCAGGTCAGCGCAAGGTAATGTA 529998
Query 32019 CGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGT 32078
| | || || ||||||| || ||| | ||||||| | |||| | |||| ||
Sbjct 529997 CACTTGTTTCCGACGGAACCTGAAGAAAGACGTCAAGGTGGTGGAGCTTGCTGGCTCGGT 529938
Query 32079 GGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCT 32138
||| || || || || |||| || |||| || ||| || || || ||
Sbjct 529937 CTCAGGGCTGACAGCATACTCGTACGGGGAAACGTCACTGCAGCAGACTATCGTTGGTCT 529878
Query 32139 TGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGG 32198
||||||| ||||||||| |||| ||| | ||| | ||||| || || || ||| |
Sbjct 529877 GGCTCAGACTTTTGTCGGTTCAAACAACATCAACATTCTCGAACCCAGCGG-CAATTTCG 529819
Query 32199 GACCCGGCTCGC-CGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCAC----CCGT 32253
| | | | || ||||| | || ||||| ||| | |||||||||| ||| | ||
Sbjct 529818 GTTCTCGATTGCAGGGTGGAAGCGACGCTGCCAGCGCACGTTACATCTACACGAGACTGT 529759
Query 32254 CTCGCACCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAAT 32313
||| |||| | | || | | | ||| | | | | ||||| ||| || | | ||||||
Sbjct 529758 CTC---CCTTTG-CCCGAAGGCTCTTCCATCAGACCGACGAGGCGTTGTTGACCTACAAT 529703
Query 32314 TTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTG 32373
||||||||| || | ||||||| | | | |||| ||| | |||| |||||| |
Sbjct 529702 ACTGATGACGGCAAGACGATCGAGCCCGAGATGTACATCCCGATCGTTCCCATGATCCTC 529643
Query 32374 GTGAACGGTGCAGAAGGCATCGGAACGGG 32402
| ||||| || || || || || |||||
Sbjct 529642 ATCAACGGCGCTGATGGTATTGGTACGGG 529614
>seq2882
Length=147932
Score = 114 bits (126), Expect = 1e-20
Identities = 136/182 (75%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || |||||||| || || || ||||| ||||| || | |||
Sbjct 6766 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCGTCCGACACCATC 6707
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||| || || ||||| ||||||||||| || || ||||| ||||| |
Sbjct 6706 GACAACGTCAAGAGCAAGATCCAGGATAAGGAGGGAATCCCACCGGACCAACAGCGATTG 6647
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593
|| || || || |||||||||||||||| || ||||| ||| ||||| || |||||||
Sbjct 6646 ATCTTCGCCGGAAAGCAACTCGAGGATGGCCGAACCCTGAGC-GACTACAACATCCAAAA 6588
Query 27594 GG 27595
||
Sbjct 6587 GG 6586
>seq2320
Length=314285
Score = 89.7 bits (98), Expect = 6e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
|||||||| || || || || ||||| ||||| || || || || || ||||||||||||
Sbjct 232792 GACAAGGAAGGCATCCCACCGGACCAACAGCGCCTGATCTTCGCCGGCAAGCAACTCGAG 232733
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| || ||||| | ||||| || |||| ||||| || || || || | ||| |
Sbjct 232732 GATGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTCCTC 232673
Query 27619 CGTCTTCGCGGTGG 27632
|| || || |||||
Sbjct 232672 CGCCTCCGTGGTGG 232659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570284215623760
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