Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq3230 143 2e-29
seq2320 96.9 3e-15
>seq3230
Length=199858
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| ||||| || || || || ||||||||| | || || || ||||| ||| | ||
Sbjct 170557 ATGCAAATATTCGTCAAGACACTCACCGGCAAGACGATCACACTGGAAGTTGAATCATCA 170616
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | ||||| || ||||||||||| ||||| || ||||| ||||||
Sbjct 170617 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGAATCCCACCGGATCAA 170676
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||||||||| || | || ||| | ||| |||| |||||||||
Sbjct 170677 CAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCTGATTACAAC 170736
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| |||||| ||| | || ||||| | ||| |||| || ||
Sbjct 170737 ATTCAGAAGGAGAGCACCCTGCACTTGGTGCTCCGTCTGCGTGGAGG 170783
>seq2320
Length=314285
Score = 96.9 bits (106), Expect = 3e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 27080 AGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGA 27139
|||||| |||||||| ||||| || |||||||| | || | ||||||||| ||| | ||
Sbjct 232793 AGACAAGGAAGGCATCCCACCGGACCAACAGCGCCTGATCTTCGCCGGCAAGCAACTCGA 232734
Query 27140 AGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199
|| | ||| ||||||| |||||||| || |||||||||||| | || ||||| |
Sbjct 232733 GGATGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTCCT 232674
Query 27200 GCGTTTGCGGGGTGGCAT 27217
|| | || ||||| ||
Sbjct 232673 CCGCCTCCGTGGTGGTAT 232656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434898431808960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |