Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq2698 86.0 5e-12
>seq2698
Length=105416
Score = 86.0 bits (94), Expect = 5e-12
Identities = 152/217 (70%), Gaps = 6/217 (3%)
Strand=Plus/Minus
Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074
|||| |||| ||| ||||| || ||||| || |||| ||||||||||| ||||| || |
Sbjct 66635 CGAAGTGCCGCCATTGGAAGCCATACACAGGACCCAAATCTCCCTCTTCTCTGTG-TCCA 66577
Query 30075 AGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTC 30133
|| || | ||||||| | ||||| || || ||| | |||||||| | || ||
Sbjct 66576 AGTCCTACGCTGTCCAAGTATTCTCTTGAGCCATTGCCATCCCAGATGTGCACGTTCTGG 66517
Query 30134 TCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACG 30193
|| ||| ||||| ||| || || || || ||||||| |||||| | | ||
Sbjct 66516 TCTTGCAGCAGTTTGGCGTTGGTTGAGCCGGCCACAAACCACAACAGCTCGGCGAGAACA 66457
Query 30194 GCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGG 30228
|| || | ||||| | |||||| |||||||| ||
Sbjct 66456 GC--TCGTAGGAAGACTCGCTTGGTGGTGAGGAGTGG 66422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406145018231278
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |