Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq2698 109 4e-19 >seq2698 Length=105416 Score = 109 bits (120), Expect = 4e-19 Identities = 193/276 (70%), Gaps = 14/276 (5%) Strand=Plus/Minus Query 27454 AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGT----GTACTCTGCTCC 27509 ||||| ||||| ||| | || | ||||| | |||| | || |||||| ||||| Sbjct 66690 AGCTGGTCCACGCCCTTTCCTGTATAGTC----CGCATGACAGTCTTCGTACTCGGCTCC 66635 Query 27510 GAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 27569 ||| |||| ||||||||| || ||||| || |||| ||||||||||| ||||| || || Sbjct 66634 GAAGTGCCGCCATTGGAAGCCATACACAGGACCCAAATCTCCCTCTTCTCTGTG-TCCAA 66576 Query 27570 GCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 27628 | || | ||||||| | ||||| || || ||| | |||||||| | || || | Sbjct 66575 GTCCTACGCTGTCCAAGTATTCTCTTGAGCCATTGCCATCCCAGATGTGCACGTTCTGGT 66516 Query 27629 CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 27688 | ||| ||||| ||| || || || || ||||||| |||||| | | || | Sbjct 66515 CTTGCAGCAGTTTGGCGTTGGTTGAGCCGGCCACAAACCACAACAGCTCGGCGAGAACAG 66456 Query 27689 CCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGG 27722 | || | ||||| | |||||| |||||||| || Sbjct 66455 C--TCGTAGGAAGACTCGCTTGGTGGTGAGGAGTGG 66422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369490659125663