Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1589 136 5e-27 >seq1589 Length=144912 Score = 136 bits (150), Expect = 5e-27 Identities = 455/700 (65%), Gaps = 6/700 (1%) Strand=Plus/Minus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 || || ||| | || | |||||| ||| || ||||| || | ||||||||||| | | Sbjct 47214 TCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAGGGCACATCAAAGTC 47155 Query 77985 C-AGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 78043 | ||| || | || ||| || ||||| || |||||||| | ||| ||| | || Sbjct 47154 CAAGTGGTGTTC-TGCTCAACACGCTTCATGAACAGATCAGGCACCCAGAGACCGTAGAA 47096 Query 78044 TAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCAT 78103 | ||| |||| | | || || ||||| ||||| ||||| | || | Sbjct 47095 CAAATCGCGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAAGGAGAA 47036 Query 78104 AATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCC 78163 | ||| | |||||||| || | || || || | | | |||||||| || || || || Sbjct 47035 GACATCTGCGTGCCATGGCTCGATGTACATGGCGAAAGCACCAGGTCGCTTGTTGCCGCC 46976 Query 78164 CTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGA 78223 ||| || | || | |||||||| ||| | || | || ||| || | | |||||| || Sbjct 46975 CTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAGACCGTTGGA 46916 Query 78224 TGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCC 78283 |||||| ||||| || || || |||| | ||||| || || | | || Sbjct 46915 TGTTCCGTTTGTACCGCTGATGTATGCTCCAGTCGCGCGGATGCGGTGAACGTTGAGTCC 46856 Query 78284 TATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTC 78343 || || || || |||| || || | ||||| ||||| || |||||||| || || Sbjct 46855 GATGCCGCCAGCGTTCTTGGAGATCATGGCGCAGGTCTTCAAGGTGTCGTAGATGCCATC 46796 Query 78344 TATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 78403 || ||||||||| |||||| | || || ||| | || ||| | ||||| Sbjct 46795 AATGCTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGAGCGTTGGGTGTTCC 46736 Query 78404 TGCATTAAATAATGTCGGAGATGCATGCGTAAACCA-TTTTTCAGAAAGTAGATTGTATG 78462 || | || | || || || ||||| || || | || ||| | |||| ||||| | Sbjct 46735 GGCGCTGAACAGCGTAGGCGAAGCATGTGTGAAGTACTTGTTCGACATGTAG-TTGTAGG 46677 Query 78463 TTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATA 78521 | ||||| || || || ||||| || | || || || || || |||||||| | ||| Sbjct 46676 TCTCAATGGCAGACTCAATGTCATCACCG-TGGATGCCAACAGCAACACGCATGATCATC 46618 Query 78522 TGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTT 78581 || || ||||| || | ||| || || ||| | ||||||| | |||| || Sbjct 46617 TGTTGTGGTCTCTCGGCAACCTTGCCGTTGATCCTCAGAAGGTATGATCTCTCCAGCGTC 46558 Query 78582 TTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAA 78621 || || ||||| || | ||| ||||| | ||||||| Sbjct 46557 TTGAATCCAAAGTATTGGTAGTTGAAGTCACGATCGTAAA 46518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694636906018720