Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1589 136 5e-27
>seq1589
Length=144912
Score = 136 bits (150), Expect = 5e-27
Identities = 455/700 (65%), Gaps = 6/700 (1%)
Strand=Plus/Minus
Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984
|| || ||| | || | |||||| ||| || ||||| || | ||||||||||| | |
Sbjct 47214 TCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACTCGTGAGGGCACATCAAAGTC 47155
Query 77985 C-AGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 78043
| ||| || | || ||| || ||||| || |||||||| | ||| ||| | ||
Sbjct 47154 CAAGTGGTGTTC-TGCTCAACACGCTTCATGAACAGATCAGGCACCCAGAGACCGTAGAA 47096
Query 78044 TAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCAT 78103
| ||| |||| | | || || ||||| ||||| ||||| | || |
Sbjct 47095 CAAATCGCGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAAGGAGAA 47036
Query 78104 AATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCC 78163
| ||| | |||||||| || | || || || | | | |||||||| || || || ||
Sbjct 47035 GACATCTGCGTGCCATGGCTCGATGTACATGGCGAAAGCACCAGGTCGCTTGTTGCCGCC 46976
Query 78164 CTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGA 78223
||| || | || | |||||||| ||| | || | || ||| || | | |||||| ||
Sbjct 46975 CTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCATGGGTACGAGACCGTTGGA 46916
Query 78224 TGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCC 78283
|||||| ||||| || || || |||| | ||||| || || | | ||
Sbjct 46915 TGTTCCGTTTGTACCGCTGATGTATGCTCCAGTCGCGCGGATGCGGTGAACGTTGAGTCC 46856
Query 78284 TATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTC 78343
|| || || || |||| || || | ||||| ||||| || |||||||| || ||
Sbjct 46855 GATGCCGCCAGCGTTCTTGGAGATCATGGCGCAGGTCTTCAAGGTGTCGTAGATGCCATC 46796
Query 78344 TATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 78403
|| ||||||||| |||||| | || || ||| | || ||| | |||||
Sbjct 46795 AATGCTGTCATCCTTCATGTCGATGAGGAAGCAGGATGCCAGCTGAGCGTTGGGTGTTCC 46736
Query 78404 TGCATTAAATAATGTCGGAGATGCATGCGTAAACCA-TTTTTCAGAAAGTAGATTGTATG 78462
|| | || | || || || ||||| || || | || ||| | |||| ||||| |
Sbjct 46735 GGCGCTGAACAGCGTAGGCGAAGCATGTGTGAAGTACTTGTTCGACATGTAG-TTGTAGG 46677
Query 78463 TTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATA 78521
| ||||| || || || ||||| || | || || || || || |||||||| | |||
Sbjct 46676 TCTCAATGGCAGACTCAATGTCATCACCG-TGGATGCCAACAGCAACACGCATGATCATC 46618
Query 78522 TGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTT 78581
|| || ||||| || | ||| || || ||| | ||||||| | |||| ||
Sbjct 46617 TGTTGTGGTCTCTCGGCAACCTTGCCGTTGATCCTCAGAAGGTATGATCTCTCCAGCGTC 46558
Query 78582 TTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAA 78621
|| || ||||| || | ||| ||||| | |||||||
Sbjct 46557 TTGAATCCAAAGTATTGGTAGTTGAAGTCACGATCGTAAA 46518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694636906018720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |