Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq407 140 7e-28 >seq407 Length=91491 Score = 140 bits (154), Expect = 7e-28 Identities = 312/466 (67%), Gaps = 2/466 (0%) Strand=Plus/Plus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 |||||| |||||| |||||| | |||| ||||| | || ||||| |||| Sbjct 18684 TTTGCCTGCCGTCTCATCGCCTTTGCCGCCATTGAGGGTATCTTCTTCTCCGGATCTTTC 18743 Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292 | ||||| ||| || ||| ||| | ||||| |||||| | || |||||| Sbjct 18744 GCATCGATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACGAG 18803 Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCT 230351 ||||| || |||||||| | || || | | || | | || ||| || | || Sbjct 18804 CTCATCTCCCGTGACGAGGGCATGCA-CACCGACTTTGCCTGCCTGCTGTTCTCTCACCT 18862 Query 230352 CCAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGA 230411 | | ||||||| | || | | || || | ||||| || || || || | | ||| Sbjct 18863 CAACAACAAGCCATCAAACCAAGTCGTTGAAGACATCATCACCGAGGCTGTCGTCATCGA 18922 Query 230412 AAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTAT 230471 |||||||| | ||||| | |||||| || | || |||||||| | || || Sbjct 18923 GCAGGAGTTCCTCACAGACGCCCTCCCATGTGCGCTCCTCGGAATGAACGCCAAGCTCAT 18982 Query 230472 GGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGT 230531 | | || |||||||| ||||| |||||||| | | | ||||| || || |||| Sbjct 18983 GTGCCAATACATCGAGTTCGTCGCCGACCGTCTCCTCCTGGCACTCGGCAACCAGAAGCA 19042 Query 230532 GTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAA 230591 |||||| ||| |||||||| | || |||||| ||| || || ||| |||||||| Sbjct 19043 CTACAACGCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCAA 19102 Query 230592 CTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||| ||||||||| |||| || || | | | ||||| ||| Sbjct 19103 CTTCTTCGAGAAGCGTGTCGGTGATTACCAAAAGGCCGGTGTCATG 19148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057741731044100