Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31]
6,070 sequences; 31,914,300 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq5787 96.9 3e-15
seq351 84.2 2e-11
>seq5787
Length=111344
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007
||| || ||||| | |||||||| |||| ||| |||||| |||||||| || || |
Sbjct 91189 TCCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGA 91130
Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067
|| || || ||||||| ||||| ||||| || | || || | ||| || ||| ||
Sbjct 91129 AAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGG 91070
Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127
| || |||||||| ||||| ||||| | | ||| || || | ||||
Sbjct 91069 GATACCCTCCTTGTCTTGAATCTTCGACTTCACGTTGTCGATTGTGTCTGATGACTCCAC 91010
Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||| | || || ||||||||||| | || ||||| || ||||||||
Sbjct 91009 TTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATTTGCAT 90962
Score = 82.4 bits (90), Expect = 6e-11
Identities = 131/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| || | |||||||||||| |||||||| ||||| ||||| | | |||
Sbjct 90717 AGCACCAAGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGCCCATCC 90658
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||| || ||||| | || || | ||||||||| || | ||| ||||||||
Sbjct 90657 TCAAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCT 90598
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| ||||| | | ||| ||||| || ||| || | ||| || |||
Sbjct 90597 TGGATCTTGCTCTTCACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTGATTGTC 90538
Query 21144 TTGCCGGT 21151
|| || ||
Sbjct 90537 TTTCCAGT 90530
>seq351
Length=85052
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| || | || |||||||| || ||||| ||||| |
Sbjct 50441 CCACCACGGAGACGGAGAACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 50382
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| || ||||||| ||||| ||||| || | || || | ||| |||||| ||
Sbjct 50381 AGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGTGGA 50322
Query 21069 ACGCCTTCCTTGTC 21082
| ||||||||||||
Sbjct 50321 ATGCCTTCCTTGTC 50308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422227962056120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |