Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq339 408 4e-109 seq407 187 2e-42 >seq339 Length=67822 Score = 408 bits (452), Expect = 4e-109 Identities = 1238/1889 (66%), Gaps = 46/1889 (2%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || || ||||| |||| | |||| |||||||||| || |||||||| Sbjct 52416 CTGGTCGACGGTGAACTGAATGGGCGCAGACGCCGCCATGGTGCGAAGGTAGTACATGCC 52357 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 |||||||| || | |||||| || || || || || | ||| || | || Sbjct 52356 AGTCTTCAGGCCGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATTTTGCCCATGGTGGG 52297 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | | ||||| | || | |||| ||||||||| || || || || || |||| Sbjct 52296 CTCCTTCATGTGGATGTTCAGGCTCTGAGACTGATCGATGAAAGCACCACGGTCAGCGGA 52237 Query 22285 CATATTTATCAATGTA-CGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 ||| | | | |||| ||| || ||||| |||||||||||||| | ||| | Sbjct 52236 CATCTGAA-CGATGTGGCGCTGGCTGATCTCCCAGACGGTCTTGTACAGAGCCTTGAGGT 52178 Query 22344 CTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402 | || || | || || | | ||||| ||| || || | ||||| || || Sbjct 52177 CATCGGGGAT-GTTTGGAATGCGCTGGATGGAACCACCATCGGCGATGATGCGGTTCTTC 52119 Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGG-TTCACCAC 22461 || | || ||| | || || ||| || || | || | |||| || || || Sbjct 52118 ATGTTGTCTGACCAGAGGCCACGCTCGACCAAGTCCTTCAGCA-ACCACGGGTTGACAAC 52060 Query 22462 TTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGA 22521 || ||||| || | | || || || ||| |||||| ||| | || |||||| | Sbjct 52059 CTGGAACTCACCAGCGAGCACACGACGGGAGTAGATGTTGCTGGTGTATGGCTCGAAACA 52000 Query 22522 TTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGA 22581 || ||| |||| ||||| | ||| || || || ||||| || || | || ||||| Sbjct 51999 CTCGTTGAAGCCCATGATCTGCGAGGTGGACGCAGTTGGCATGGGAGCGACGAGGAGCGA 51940 Query 22582 GTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGA 22641 ||| | | || |||| | || || |||||| | ||||||||| ||||| | Sbjct 51939 GTTGCGGACACCATGCTCGGCGATCTTGGCCTTGAGTGCGGCCCAGTCCCAGAGATCAGT 51880 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGC--GACTCGCCGGGCTGCCT 22699 || |||||| ||||||| |||||||| | | |||| || || || | || Sbjct 51879 AGGAGTCACAC---CCCACATGTCGTATTGGAGCTCGCCCTTGGAGACGGGGGAC--CCC 51825 Query 22700 TCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCG 22759 ||||| || ||||| || ||| | || || || ||||| || | || || Sbjct 51824 TCGTATGTCTCGTATGGTCCAAGCTTGGCAGCGAGATCGCATGAGGCGGTGAGAGCAGCG 51765 Query 22760 TAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GC----GGCGACGCTTTCGT 22814 | || || ||||||||||| | |||| | | |||| || || || || Sbjct 51764 TGGTAGATGGTCTCGAAGATCTGGATGTTGAGCT-GGCGAGCCTCAGGAGAG----TCAA 51710 Query 22815 ACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTC 22874 | ||||| |||| || ||| || || || | ||| | || || | |||||| || | Sbjct 51709 AAGGCATGCGCAGAGCCAAGAAAGCATCAGCAAGACCGTTGACACCAAGACCGATGGGAC 51650 Query 22875 GGTTTTTCAGATTCGACACTTTTG--CCTCGGGCAAAGGATACCAATTCGAATCGATTGT 22932 ||| | || | ||| | | || |||| || || || ||||| | Sbjct 51649 GGTGACGGAAGTTG--CTCTTGCGAGCTTCTGGCACGGGGTAGTGGTTGACCTCGATGAT 51592 Query 22933 TCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAAC 22992 |||||||||| |||| || | | || | || |||||| |||| Sbjct 51591 CTTGTTCAAGTTCTTGGTGACGGTCTGGGTGACCTGGTGGAGCTTCTCGAAGTCG-AAAC 51533 Query 22993 GCCCGAT-----TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCC 23047 || || | ||| | || | || | ||||| || ||||| ||||| ||||| Sbjct 51532 GCTCGTTCTCAATGT-CGACGTATGTGGGCAGGGCGAGAGATGCAAGGTTGCACACGGCG 51474 Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 |||||||| | |||||||| | ||| ||||| || |||||| | || || Sbjct 51473 ACCTCGTCAGGAGCAGTGTACTCGATAATCTCGGTGCAGAGATTGGAGCTGCGGATGGTT 51414 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 ||||| || |||||||||| || | ||| | ||||||||||| ||||| || || Sbjct 51413 CCCAAGTTCTTCTGGTTGCTCTTGCTGTTGGCAGCGTCCTTGTAGAGGATGTATGGGGTA 51354 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGC 23227 || |||||| || | ||||| ||| || ||| | |||||||| | || ||| | Sbjct 51353 CCGGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCTTCTGAGCGCGGACG-GTCTC 51295 Query 23228 ACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-AC 23285 ||| ||| ||| || |||||| | ||||| | | || || || || ||||| || Sbjct 51294 ACGACCCTTGCCCTCACGCTCGTATCGCTCGTACAGCTCCTCGAACTCAGCGCCGTAGAC 51235 Query 23286 AGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAA 23345 | || ||||| ||||| | | || ||||| | | |||| | | | | |||| Sbjct 51234 A-TCAGCCAGACCGGGGCACTCGTGAGGGCACATCAAAGTCCAGGTGGTATTTTGCTCAA 51176 Query 23346 CGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCT 23405 | || |||| || ||||| || | ||| ||| |||||||||| ||||| || || |||| Sbjct 51175 CACGCTTCATGAAGAGATCTGGGACCCACAGACCGTAGAACAGATCGCGAGCACGAACCT 51116 Query 23406 CCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCT 23465 |||| || ||| |||||| | |||||| ||| || || || || ||||| |||| Sbjct 51115 CCTCCTTTCCGTGGTTCTTGCGGAGATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCT 51056 Query 23466 CGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCG 23525 ||| ||| | |||||| || || |||| ||| ||||||||||| |||||||| || || | Sbjct 51055 CGATGTACATGGCAAAAGCACCAGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGAGCGG 50996 Query 23526 TGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCA 23585 ||||||| |||| | ||||| || |||||||||||||| | ||| ||| | Sbjct 50995 TGTTGTTAAACACACGCAGCATGGGTACGAGACCGTTGGATGTTCCGTTGGTGCCGCTGA 50936 Query 23586 CACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCG 23645 | || |||| |||| |||| |||| || || ||||||||| | || | Sbjct 50935 TGTATGCTCCGGTTGCGCGAATTCTGTGGACGTTGAGCCCAATGCCTCCGGCGTTCTTGG 50876 Query 23646 ATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCG 23705 | ||||| ||||| || | ||||||||||| || || |||||||| ||||| | Sbjct 50875 AGATCATGGCGCAGGTCTTTAATGTGTCGTAGATCCCATCAATGCTGTCATCTTTCATGT 50816 Query 23706 CGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGC 23765 ||| | ||| || || | || ||| || ||||| || | || |||||| || || Sbjct 50815 CGATGAGGAAGCAGGATGCCAGTTGAGCGTTGGGTGTTCCAGCGCTGAACAGCGTAGGCG 50756 Query 23766 TGGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGCGGCATCAATG 23824 || || || ||||| |||||||| ||| ||||| || || ||||||| || ||| Sbjct 50755 ACGCATGTGTGAAGTACTTGTTCGACATGTAG-TTGTAGGTCTCAATGGCGGACTCGATG 50697 Query 23825 TCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG---ACC 23881 ||||| ||||| || |||| ||| || ||||| ||||| | ||| ||||||||| ||| Sbjct 50696 TCCTCGCCGTGGATGCCGACGGCCACACGCATGATCATCTGTTGTGGTCTCTCGGCAACC 50637 Query 23882 GTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCA 23941 | |||||| || | || || ||||| | | || ||| || |||||||| || | Sbjct 50636 TT---GCCGTTGATCCTCAAAAGGTATGACCTCTCCAGCGTCTTGAATCCAAAGTATTGG 50580 Query 23942 TAGTTAAAGTCACGATCGTGCACTATGGC 23970 ||||| |||||||| |||| || ||||| Sbjct 50579 TAGTTGAAGTCACGGTCGTAAACGATGGC 50551 >seq407 Length=91491 Score = 187 bits (206), Expect = 2e-42 Identities = 556/846 (66%), Gaps = 25/846 (3%) Strand=Plus/Plus Query 57562 ATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAG 57621 ||| | | || ||| | |||||||||||||| || || || || ||||||| ||| || Sbjct 18280 ATCAACAGATCTGGCAAATGTACAAAAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGA 18339 Query 57622 TAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATT 57678 | || || || |||||||| ||| ||| | | |||| || ||| | | Sbjct 18340 TCGATCTCTCCAAGGATCTTCACGACTGGAACAAGCGTCTCAACGACGACGAGCGCTTCT 18399 Query 57679 TTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGG 57738 | || ||||| |||| || ||||| || || ||||| || || |||||||| | Sbjct 18400 TCATCTCCCACGTCCTGGCCTTCTTCGCTGCTTCGGATGGCATCGTCAACGAGAACCTCA 18459 Query 57739 TCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAG 57798 |||| | || |||||||||| | | ||||| | ||||| ||||| || || Sbjct 18460 TCGAGCGCTTCAGCGGAGAAGTGCAAATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGA 18519 Query 57799 TGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGG 57858 | || || ||| | || || || | || || || |||||||| || ||| | | | Sbjct 18520 TCATGATGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCG 18579 Query 57859 A---CAA-CGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCC 57914 | ||| | ||| ||||| || |||||||| ||||| | || || ||| Sbjct 18580 AGCCCAAGCAACGC---ACGTAC-CTCTTCAACGCCATCGACAACATCCCATGCATCCGT 18635 Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAG 57971 |||||||| || ||| | | ||||| || || | |||| || ||| Sbjct 18636 AAGAAGGCTGACTGGGCGCTGCGGTGGATCTC---CGACAAGAACTCCACCTTTGCCTGC 18692 Query 57972 AGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT-GCGGCAAT 58030 | || ||||| || |||||| | || ||||| ||||| || || | |||| || | || Sbjct 18693 CGTCTCATCGCCTTTGCCGCCATTGAGGGTATCTTCTTCTCCGG-ATCTTTCGCATCGAT 18751 Query 58031 ATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATC 58090 || ||| ||||||| || || || ||||||||||| || || ||||||| | || || Sbjct 18752 CTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTC 18811 Query 58091 GCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAA 58150 || |||||||| | || || || ||||| ||||| ||| ||||||| | ||| || Sbjct 18812 CCGTGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCTCACCTCAACAACAA 18871 Query 58151 ACCGACGCGGGATCGCATC-TTG--GACATTATCACCGAGGCGGTCGCGATCGAAAATGA 58207 || | | | || ||| ||||| ||||||||||| |||| ||||| | || Sbjct 18872 GCCATC---AAACCAAGTCGTTGAAGACATCATCACCGAGGCTGTCGTCATCGAGCAGGA 18928 Query 58208 GTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAA 58267 ||| |||| || ||||| || || | ||||| |||||| | | |||| | Sbjct 18929 GTTCCTCACAGACGCCCTCCCATGTGCGCTCCTCGGAATGAACGCCAAGCTCATGTGCCA 18988 Query 58268 GTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTACAA 58327 ||||| ||||| || |||||| | || | || | ||| || || ||||| Sbjct 18989 ATACATCGAGTTCGTCGCCGACCGTCTCCTCCTGGCACTCGGCAACCAGAAGCACTACAA 19048 Query 58328 CACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTT 58387 | | | || || || || || ||| | ||||| |||| |||||||| ||||| || Sbjct 19049 CGCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGAGGCAAGACCAACTTCTT 19108 Query 58388 CGAAAA 58393 ||| || Sbjct 19109 CGAGAA 19114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445732577474400