Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq339 104 5e-17 >seq339 Length=67822 Score = 104 bits (114), Expect = 5e-17 Identities = 165/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGC-CGCCTCCTTAAGAGTATCATAAATACCCTCAAT 94850 ||||| || |||||||||| || || | || |||| || || || || || ||||| Sbjct 50891 CCTCCGGCGTTCTTGGAGATCATGGCGCAGGTCTTTAAT-GTGTCGTAGATCCCATCAAT 50833 Query 94851 GCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACA 94910 ||| ||||||| | | | | |||||||| || | ||||| | || ||||||| Sbjct 50832 GCTGTCATCTTTCATGTCGATGAGGAAGCAGGATGCCAGTTGAGCGTTGGGTGTTCCAGC 50773 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 | ||||| || || || ||||| || || || | |||||||| | || || || Sbjct 50772 GCTGAACAGCGTAGGCGACGCATGTGTGAAGTACTTGTTCGACATGTAGTTGTAGGTCTC 50713 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 |||| | || | |||||| ||||| |||||||| ||||||||||| ||||| Sbjct 50712 AATGGCGGACTCGATGTCCTCGCCGTGGATGCCGACGGCCACACGCATGATCAT 50659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989507038196850