Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq4102 104 4e-18 >seq4102 Length=44891 Score = 104 bits (114), Expect = 4e-18 Identities = 84/99 (85%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || |||||||| |||||||||||||| || || Sbjct 39797 GCGAAGCGTCACCGCAAGATTT-TGCGCGACAACATCCAGGGAATCACCAAGCCCGCAAT 39739 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| |||||||| ||||||||||| ||||||||| |||| Sbjct 39738 CCGCCGTCTGGCGCGTCGTGGTGGTGTCAAGCGTATCTC 39700 Score = 84.2 bits (92), Expect = 3e-12 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| || | ||| | |||| ||||||| || || |||| ||| | Sbjct 39627 TGATCTACGAGGAGACCCGCGGAGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACG 39568 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| |||||||| | || ||||||| | Sbjct 39567 CCGTCACCTACACCGAGCACGCCAAGCGAAAGACCGTCACCTCTCTCGACGTCGTCTACG 39508 Query 16656 CATTGAAACGTCAAGGCCG 16674 | | || ||||||||||| Sbjct 39507 CCCTCAAGCGTCAAGGCCG 39489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79069650156510