Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31]
6,070 sequences; 31,914,300 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq339 325 1e-83
>seq339
Length=67822
Score = 325 bits (360), Expect = 1e-83
Identities = 1156/1787 (65%), Gaps = 27/1787 (2%)
Strand=Plus/Plus
Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTG 363445
||| ||| |||| |||||| |||||| || ||||| | | ||||| || | |||
Sbjct 50583 ATACTTT-GGATTCAAGACGCTGGAGAGGTCATACCTTTTGAGGATCAACGGCAAGGTTG 50641
Query 363446 TTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTG 363505
|| | || || || ||| | |||||||| || | || ||||| || ||| | |
Sbjct 50642 CCGAGAGACCACAACAGATGATCATGCGTGTGGCCGTCGGCATCCACGGCGAGGACATCG 50701
Query 363506 ATGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCC 363563
| |||| ||||| || || || || | | || | | ||| ||||| || || ||||
Sbjct 50702 AGTCCGCCATTGAGACCTACAA-CTAC-ATGTCGAACAAGTACTTCACACATGCGTCGCC 50759
Query 363564 AACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAAT 363623
|| ||| || |||||||| | || | || || | || ||||| || | | ||
Sbjct 50760 TACGCTGTTCAGCGCTGGAACACCCAACGCTCAACTGGCATCCTGCTTCCTCATCGACAT 50819
Query 363624 GAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAA 363683
||| || || ||| || || |||| |||||| | |||| || || | || |||||
Sbjct 50820 GAAAGATGACAGCATTGATGGGATCTACGACACATTAAAGACCTGCGCCATGATCTCCAA 50879
Query 363684 GAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCA--CAGAACAGTTACAT 363740
||| || || || ||||| | | || |||||| |||| ||| | || || |||||
Sbjct 50880 GAACGCCGGAGGCATTGGGCTCAACG-TCCACAGAATTCGCGCAACCGGAGCA--TACAT 50936
Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800
||||||| ||| || || || || || |||||||| ||||||||| |||| ||
Sbjct 50937 CAGCGGCACCAACGGAACATCCAACGGTCTCGTACCCATGCTGCGTGTGTTTAACAACAC 50996
Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860
|| | |||||||||||||| || ||||| || || ||||| ||||| ||||
Sbjct 50997 CGCTCGCTACGTCGACCAGGGCGGCAACAAGCGACCTGGTGCTTTTGCCATGTACATCGA 51056
Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGA 363920
||| || || ||| | || || | || ||||| || ||| ||||| |||||
Sbjct 51057 GCCATGGCACGCAGATGTCTTCTCCTTCTTGGATCTCCGCAAGAACCACGGAAAGGAGGA 51116
Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980
| ||||| || ||||||||||| | || ||||| | || | || |||||||| ||
Sbjct 51117 GGTTCGTGCTCGCGATCTGTTCTACGGTCTGTGGGTCCCAGATCTCTTCATGAAGCGTGT 51176
Query 363981 GGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040
||| | || | ||| | | | ||||| ||||| || || ||||| | |||||
Sbjct 51177 TGAGCAAAATACCACCTGGACTTTGATGTGCCCTCACGAGTGCCCCGGTCTGGCTGATGT 51236
Query 364041 ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAA 364100
| || | || | | | || ||||| || || ||||| |||| |||| |
Sbjct 51237 CTACGGCGCTGAGTTCGAGGAGCTGTACGAGCGATACGAGCGTGAGGGCAAGGGTCGTGA 51296
Query 364101 GACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAAC 364160
||| | | ||| |||||||| |||| ||||||| | || | || | ||||| || ||
Sbjct 51297 GACCGTCCGCGCTCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGACCGGTAC 51356
Query 364161 ACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220
|| || || | ||||| || | |||| ||||| ||||||| || || | || ||
Sbjct 51357 CCCATACATCCTCTACAAGGACGCTGCCAACAGCAAGAGCAACCAGAAGAACTTGGGAAC 51416
Query 364221 AATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279
| || |||| ||| || || ||||||||||| || ||||| ||||| |||||| |
Sbjct 51417 CA-TCCGCAGCTCCAATCTCTGCACCGAGATTATCGAGTACACTGCTCCTGACGAGGTCG 51475
Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATG-GTAC-----TT 364333
|||| || |||||||| || |||| || || | | || | || | || ||
Sbjct 51476 CCGTGTGCAACCTTGCATCTCTCGCCCTGCCCACATACGTCGACATTGAGAACGAGCGTT 51535
Query 364334 TTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTA 364393
| ||| | || | || | | || ||| | | || || | ||||| | |
Sbjct 51536 TCGACTTCGAGAAGCTCCACCAGGTCACCCAGACCGTCACCAAGAACTTGAACAAGATCA 51595
Query 364394 TCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCCCG 364452
|||| || | || || | || ||||| || | | || | ||||| || ||
Sbjct 51596 TCGAGGTCAACCACTACCCCGTGCCAGAAGCTCGCAAGAGC-AACTTCCGTCACCGTCCC 51654
Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGAT 364512
|| ||||||||||| | || || ||||| | ||| || || ||| | |||||
Sbjct 51655 ATCGGTCTTGGTGTCAACGGTCTTGCTGATGCTTTCTTGGCTCTGCGCATGCCTTTTGAC 51714
Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572
|| ||||| ||||| || || | ||||||| || || || || || || |
Sbjct 51715 TCTCCTGAGGCTCGCCAGCTCAACATCCAGATCTTCGAGACCATCTACCACGCTGCTCTC 51774
Query 364573 ACTGCTTCGTGTGATTTGGCAAAAACCAAG---GGAAAGTACTCTACTTATGAGGGGTCC 364629
|| || || || ||| | || ||||| ||| ||| || || |||||||||
Sbjct 51775 ACCGCCTCATGCGATCTCGC---TGCCAAGCTTGGACCATACGAGACATACGAGGGGTCC 51831
Query 364630 CCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGG 364689
|| | || |||| | |||| | || | ||| ||| || || ||| | |||
Sbjct 51832 CCCGTCTCCAAGGGCGAGCTCCAATACGACATGTGGGGTGTGACTCCTACTGATCTCTGG 51891
Query 364690 AACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACA 364749
|||||| | || |||| | |||||||| |||||||| ||| |
Sbjct 51892 GACTGGGCCGCACTCAAGGCCAAGATCGCCGAGCATGGTGTCCGCAACTCGCTCCTCGTC 51951
Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809
|| |||||||| || || || || | |||||| | || ||||||||| ||||| ||
Sbjct 51952 GCTCCCATGCCAACTGCGTCCACCTCGCAGATCATGGGCTTCAACGAGTGTTTCGAGCCA 52011
Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869
| || ||||| | || || || || || || | || || || | ||| || || |
Sbjct 52012 TACACCAGCAACATCTACTCCCGTCGTGTGCTCGCTGGTGAGTTCCAGGTTGTCAACCCG 52071
Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929
| | | ||||| | ||| || || || ||| |||| |||||||||| |||
Sbjct 52072 TGGTTGCTGAAGGACTTGGTCGAGCGTGGCCTCTGGTCAGACAACATGAAGAACCGCATC 52131
Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATT 364989
||||||| | |||||| | ||| ||||||| | || || || || ||| || |
Sbjct 52132 ATCGCCGATGGTGGTTCCATCCAGCGCATTCCAAACATCCCCGATGACCTCAAGGCTCTG 52191
Query 364990 TACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGT 365049
||||| ||||| ||||| || | ||| || || | ||| | || || || |||
Sbjct 52192 TACAAGACCGTCTGGGAGATCAGCCAGCGCCACATCGTTCAGATGTCCGCTGACCGTGGT 52251
Query 365050 GCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAG 365109
||||| ||| |||| ||| | ||| | ||||| |||| ||| | |||
Sbjct 52252 GCTTTCATCGATCAGTCTCAGAGCCTGAACATCCACATGAAGGAGCCCACCATGGGCAAA 52311
Query 365110 CTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| || |||||| ||| ||| ||||| ||| || ||||| ||
Sbjct 52312 ATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGCCTGAAGACTGG 52358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303252235746740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |