Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq339 325 1e-83 >seq339 Length=67822 Score = 325 bits (360), Expect = 1e-83 Identities = 1156/1787 (65%), Gaps = 27/1787 (2%) Strand=Plus/Plus Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTG 363445 ||| ||| |||| |||||| |||||| || ||||| | | ||||| || | ||| Sbjct 50583 ATACTTT-GGATTCAAGACGCTGGAGAGGTCATACCTTTTGAGGATCAACGGCAAGGTTG 50641 Query 363446 TTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTG 363505 || | || || || ||| | |||||||| || | || ||||| || ||| | | Sbjct 50642 CCGAGAGACCACAACAGATGATCATGCGTGTGGCCGTCGGCATCCACGGCGAGGACATCG 50701 Query 363506 ATGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCC 363563 | |||| ||||| || || || || | | || | | ||| ||||| || || |||| Sbjct 50702 AGTCCGCCATTGAGACCTACAA-CTAC-ATGTCGAACAAGTACTTCACACATGCGTCGCC 50759 Query 363564 AACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAAT 363623 || ||| || |||||||| | || | || || | || ||||| || | | || Sbjct 50760 TACGCTGTTCAGCGCTGGAACACCCAACGCTCAACTGGCATCCTGCTTCCTCATCGACAT 50819 Query 363624 GAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAA 363683 ||| || || ||| || || |||| |||||| | |||| || || | || ||||| Sbjct 50820 GAAAGATGACAGCATTGATGGGATCTACGACACATTAAAGACCTGCGCCATGATCTCCAA 50879 Query 363684 GAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCA--CAGAACAGTTACAT 363740 ||| || || || ||||| | | || |||||| |||| ||| | || || ||||| Sbjct 50880 GAACGCCGGAGGCATTGGGCTCAACG-TCCACAGAATTCGCGCAACCGGAGCA--TACAT 50936 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||||||| ||| || || || || || |||||||| ||||||||| |||| || Sbjct 50937 CAGCGGCACCAACGGAACATCCAACGGTCTCGTACCCATGCTGCGTGTGTTTAACAACAC 50996 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860 || | |||||||||||||| || ||||| || || ||||| ||||| |||| Sbjct 50997 CGCTCGCTACGTCGACCAGGGCGGCAACAAGCGACCTGGTGCTTTTGCCATGTACATCGA 51056 Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGA 363920 ||| || || ||| | || || | || ||||| || ||| ||||| ||||| Sbjct 51057 GCCATGGCACGCAGATGTCTTCTCCTTCTTGGATCTCCGCAAGAACCACGGAAAGGAGGA 51116 Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980 | ||||| || ||||||||||| | || ||||| | || | || |||||||| || Sbjct 51117 GGTTCGTGCTCGCGATCTGTTCTACGGTCTGTGGGTCCCAGATCTCTTCATGAAGCGTGT 51176 Query 363981 GGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040 ||| | || | ||| | | | ||||| ||||| || || ||||| | ||||| Sbjct 51177 TGAGCAAAATACCACCTGGACTTTGATGTGCCCTCACGAGTGCCCCGGTCTGGCTGATGT 51236 Query 364041 ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAA 364100 | || | || | | | || ||||| || || ||||| |||| |||| | Sbjct 51237 CTACGGCGCTGAGTTCGAGGAGCTGTACGAGCGATACGAGCGTGAGGGCAAGGGTCGTGA 51296 Query 364101 GACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAAC 364160 ||| | | ||| |||||||| |||| ||||||| | || | || | ||||| || || Sbjct 51297 GACCGTCCGCGCTCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGACCGGTAC 51356 Query 364161 ACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220 || || || | ||||| || | |||| ||||| ||||||| || || | || || Sbjct 51357 CCCATACATCCTCTACAAGGACGCTGCCAACAGCAAGAGCAACCAGAAGAACTTGGGAAC 51416 Query 364221 AATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279 | || |||| ||| || || ||||||||||| || ||||| ||||| |||||| | Sbjct 51417 CA-TCCGCAGCTCCAATCTCTGCACCGAGATTATCGAGTACACTGCTCCTGACGAGGTCG 51475 Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATG-GTAC-----TT 364333 |||| || |||||||| || |||| || || | | || | || | || || Sbjct 51476 CCGTGTGCAACCTTGCATCTCTCGCCCTGCCCACATACGTCGACATTGAGAACGAGCGTT 51535 Query 364334 TTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTA 364393 | ||| | || | || | | || ||| | | || || | ||||| | | Sbjct 51536 TCGACTTCGAGAAGCTCCACCAGGTCACCCAGACCGTCACCAAGAACTTGAACAAGATCA 51595 Query 364394 TCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCCCG 364452 |||| || | || || | || ||||| || | | || | ||||| || || Sbjct 51596 TCGAGGTCAACCACTACCCCGTGCCAGAAGCTCGCAAGAGC-AACTTCCGTCACCGTCCC 51654 Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGAT 364512 || ||||||||||| | || || ||||| | ||| || || ||| | ||||| Sbjct 51655 ATCGGTCTTGGTGTCAACGGTCTTGCTGATGCTTTCTTGGCTCTGCGCATGCCTTTTGAC 51714 Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572 || ||||| ||||| || || | ||||||| || || || || || || | Sbjct 51715 TCTCCTGAGGCTCGCCAGCTCAACATCCAGATCTTCGAGACCATCTACCACGCTGCTCTC 51774 Query 364573 ACTGCTTCGTGTGATTTGGCAAAAACCAAG---GGAAAGTACTCTACTTATGAGGGGTCC 364629 || || || || ||| | || ||||| ||| ||| || || ||||||||| Sbjct 51775 ACCGCCTCATGCGATCTCGC---TGCCAAGCTTGGACCATACGAGACATACGAGGGGTCC 51831 Query 364630 CCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGG 364689 || | || |||| | |||| | || | ||| ||| || || ||| | ||| Sbjct 51832 CCCGTCTCCAAGGGCGAGCTCCAATACGACATGTGGGGTGTGACTCCTACTGATCTCTGG 51891 Query 364690 AACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACA 364749 |||||| | || |||| | |||||||| |||||||| ||| | Sbjct 51892 GACTGGGCCGCACTCAAGGCCAAGATCGCCGAGCATGGTGTCCGCAACTCGCTCCTCGTC 51951 Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 || |||||||| || || || || | |||||| | || ||||||||| ||||| || Sbjct 51952 GCTCCCATGCCAACTGCGTCCACCTCGCAGATCATGGGCTTCAACGAGTGTTTCGAGCCA 52011 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 | || ||||| | || || || || || || | || || || | ||| || || | Sbjct 52012 TACACCAGCAACATCTACTCCCGTCGTGTGCTCGCTGGTGAGTTCCAGGTTGTCAACCCG 52071 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929 | | | ||||| | ||| || || || ||| |||| |||||||||| ||| Sbjct 52072 TGGTTGCTGAAGGACTTGGTCGAGCGTGGCCTCTGGTCAGACAACATGAAGAACCGCATC 52131 Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATT 364989 ||||||| | |||||| | ||| ||||||| | || || || || ||| || | Sbjct 52132 ATCGCCGATGGTGGTTCCATCCAGCGCATTCCAAACATCCCCGATGACCTCAAGGCTCTG 52191 Query 364990 TACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGT 365049 ||||| ||||| ||||| || | ||| || || | ||| | || || || ||| Sbjct 52192 TACAAGACCGTCTGGGAGATCAGCCAGCGCCACATCGTTCAGATGTCCGCTGACCGTGGT 52251 Query 365050 GCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAG 365109 ||||| ||| |||| ||| | ||| | ||||| |||| ||| | ||| Sbjct 52252 GCTTTCATCGATCAGTCTCAGAGCCTGAACATCCACATGAAGGAGCCCACCATGGGCAAA 52311 Query 365110 CTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | || |||||| ||| ||| ||||| ||| || ||||| || Sbjct 52312 ATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGCCTGAAGACTGG 52358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303252235746740