Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq407 149 7e-31 >seq407 Length=91491 Score = 149 bits (164), Expect = 7e-31 Identities = 457/696 (66%), Gaps = 13/696 (2%) Strand=Plus/Minus Query 92966 TTCATTCCTAGAAGACGTACA-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAAC 93024 |||||||| || || || ||| || || ||||| || | ||| || | |||||| || || Sbjct 18970 TTCATTCCGAGGAG-CGCACATGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGACGAC 18912 Query 93025 GGCTTCTTTCAAGATTTCTATTACTCTACTA--TTTGGTGGTTT-TTGTACGACATAATT 93081 || || | | ||| ||| || ||| |||| ||| || |||| || | | Sbjct 18911 AGCCTCGGTGATGATGTCTTCAACG--ACTTGGTTTGATGGCTTGTTGTT-GAGGTGAGA 18855 Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141 | ||| | ||| ||||||||||| || | || ||||| || || || | ||| ||| Sbjct 18854 GAACAGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGA 18795 Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201 ||| || | || || | || || || ||||| | ||| || || || || ||| || Sbjct 18794 GAAGGTGAGGCCGGGCATGAGACCACGCTTCTTCAACCAGAAGATCGATGCGAAAGATCC 18735 Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261 || || || ||||| || | ||| ||||| || | | ||| |||||| | | | Sbjct 18734 GGAGAAGAAGATACCCTCAATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTGGAGTT 18675 Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-T 93320 || | |||||| | ||||| || || || || || || || | |||| | Sbjct 18674 CTTGTCGGAGATCCACCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGA-TGTTGT 18616 Query 93321 CGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACA 93380 |||| ||||| || ||||| || | | | || | |||||||| ||||| | | Sbjct 18615 CGATGGCGTTGAAGAGGTACGTGCGTTGCTTGGGCTCGCTGATGTATGTGTCGATGAGGA 18556 Query 93381 GAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAG 93440 | || || | || || |||| |||||||| || ||||| |||||||| || | | Sbjct 18555 GGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGG 18496 Query 93441 CTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCAT 93500 | || | ||| ||||||||| || | ||| | ||| || || ||||| || |||| Sbjct 18495 CCTCGGGGATTTGCACTTCTCCGCTGAAGCGCTCGATGAGGTTCTCGTTGACGATGCCAT 18436 Query 93501 CGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT---AA 93557 | || || || || || |||| | || || || ||| || || || | Sbjct 18435 CCGAAGCAGCGAAGAAGGCCAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGAC 18376 Query 93558 GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATG 93617 |||| | ||| ||| ||||| || || ||||||| || ||| | ||||| || || | Sbjct 18375 GCTTGTTCCAGTCGTGAAGATCCTTGGAGAGATCGATCTCCTCGGCGGTCCAGAAGGAGG 18316 Query 93618 CTTCTGCTTTTTTGTACATATCCCATATGTCTTGAT 93653 | || || ||||||||||| | ||| || | ||||| Sbjct 18315 CCTCGGCCTTTTTGTACATTTGCCAGATCTGTTGAT 18280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556818548186800