Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq339 279 5e-70 >seq339 Length=67822 Score = 279 bits (308), Expect = 5e-70 Identities = 633/945 (67%), Gaps = 8/945 (1%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| ||||| || ||||||| ||| ||||| | | ||| | ||| Sbjct 50575 AACTACCAATACTTTGGATTCAAGACGCTGGAGAGGTCATACCTTTTGAGGATCAACGGC 50634 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| ||||| |||| || ||| || | ||||| || ||| |||| || |||||| | Sbjct 50635 AAGGTTGCCGAGAGACCACAACAGATGATCATGCGTGTGGCCGTCGGCATCCACGGCGAG 50694 Query 93835 GACATGCCGAAT--GTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATG 93891 ||||| ||| | | | | | | || ||||| | ||||| | || |||| Sbjct 50695 GACAT--CGAGTCCGCCATTGAGACCTACAACTACATGTCGAACAAGTACTTCACACATG 50752 Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 | | || || ||||||| ||| || || || | || || | || || ||||| Sbjct 50753 -CGTCGCCTACGCTGTTCAGCGCTGGAACACCCAACGCTCAACTGGCATCCTGCTTCCTC 50811 Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 || ||| | || | ||| ||| || || | ||||| | ||| ||| || | Sbjct 50812 ATCGAC-ATGAAAGATGACAGCATTGATGGGATCTACGACACATTAAAGACCTGCGCCAT 50870 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070 ||||| || |||| || || || ||| ||| |||||| | || || | || | Sbjct 50871 GATCTCCAAGAACGCCGGAGGCATTGGGCTCAACGTCCACAGAATTCGCGCAACCGGAGC 50930 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 |||||| |||| ||||| || || |||||||| ||||| || ||||| || || || || Sbjct 50931 ATACATCAGCGGCACCAACGGAACATCCAACGGTCTCGTACCCATGCTGCGTGTGTTTAA 50990 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 |||| | || |||||||| |||||||| || | | | ||| |||| || | || Sbjct 50991 CAACACCGCTCGCTACGTCGACCAGGGCGGCAACAAGCGACCTGGTGCTTTTGCCATGTA 51050 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 ||||||| |||||||| || || | ||| | || || || ||||||||||| || Sbjct 51051 CATCGAGCCATGGCACGCAGATGTCTTCTCCTTCTTGGATCTCCGCAAGAACCACGGAAA 51110 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || | || | || || ||||||| ||| ||||| ||||| || || ||||| Sbjct 51111 GGAGGAGGTTCGTGCTCGCGATCTGTTCTACGGTCTGTGGGTCCCAGATCTCTTCATGAA 51170 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 || || ||| |||| || |||||| | | | || || | || || ||||| ||| | Sbjct 51171 GCGTGTTGAGCAAAATACCACCTGGACTTTGATGTGCCCTCACGAGTGCCCCGGTCTGGC 51230 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430 || || | || | || || || |||| | || ||||| ||||||||| Sbjct 51231 TGATGTCTACGGCGCTGAGTTCGAGGAGCTGTACGAGCGATACGAGCGTGAGGGCAAGGG 51290 Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490 | || | ||| |||||| ||| || ||| | || | || ||||| Sbjct 51291 TCGTGAGACCGTCCGCGCTCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAAACCGAGAC 51350 Query 94491 GGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550 ||||| || |||||| | | ||||||| ||| |||| |||| ||||||| || || | Sbjct 51351 CGGTACCCCATACATCCTCTACAAGGACGCTGCCAACAGCAAGAGCAACCAGAAGAACTT 51410 Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610 || ||| ||||| ||||| |||||||||||| ||||||| ||| |||| ||||| Sbjct 51411 GGGAACCATCCGCAGCTCCAATCTCTGCACCGAGATTATCGAGTACACTGCTCCTGACGA 51470 Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGT 94655 | | || ||||| ||||| | || || |||| |||| | ||| Sbjct 51471 GGTCGCCGTGTGCAACCTTGCATCTCTCGCCCTGCCCACATACGT 51515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494685662877200