Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31]
6,070 sequences; 31,914,300 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq407 147 2e-30
seq360 104 2e-17
seq5787 98.7 1e-15
seq351 87.8 2e-12
>seq407
Length=91491
Score = 147 bits (162), Expect = 2e-30
Identities = 499/761 (66%), Gaps = 21/761 (3%)
Strand=Plus/Plus
Query 52086 AACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGC 52145
||||| |||||||||| || ||| ||||| |||| |||||||| || | ||| ||
Sbjct 18381 AACGACGACGAGCGCTTCTTCATCTCCCACGTCCTGGCCTTCTTCGCTGCTTCGGATGGC 18440
Query 52146 ATCGTGAACATTAACCTCATCGAGTACATGCAGCGGA-ACGTTCCGGAACTCGAGGCGCA 52204
||||| ||| |||||||||||| | | ||||||| | || | | |||||| |
Sbjct 18441 ATCGTCAACGAGAACCTCATCGAGCGCTT-CAGCGGAGAAGTGCAAATCCCCGAGGCCCG 18499
Query 52205 ATACTTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCT 52264
| ||| || || || | | || ||| | | ||| | |||| ||| || ||
Sbjct 18500 CTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACATACTCCCTCCT 18559
Query 52265 CATTGAGCAGCTGATAAAAGATGAGCACGAGCGCGACACG---CTGCTGAATGCGTTCGA 52321
||| || || | | | || |||| | ||| |||| || | || || ||||
Sbjct 18560 CATCGA-CACAT-ACATCAGC-GAGCCCAAGCAACGCACGTACCTCTTCAACGCCATCGA 18616
Query 52322 GCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACAC 52381
|| | || ||| | || || |||||| | ||||| || ||||||| | | |
Sbjct 18617 CAACATCCCATGCATCCGTAAGAAGGCTGACTGGGCGCTGCGGTGGATCTCCGACAAGAA 18676
Query 52382 CGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGG 52441
| |||| | ||| || | | ||||| ||| | ||||| | || || |||||
Sbjct 18677 CTCCACCTTTGCCTGCCGTCTCATCGCCTTTGCCGCCATTGAGGGTATCTTCTTCTCCGG 18736
Query 52442 CAGCTTT-GCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCA 52500
| |||| || | ||||| | | || | | || | ||||||||||| || |||
Sbjct 18737 -ATCTTTCGCATCGATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCT 18795
Query 52501 GCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACA 52560
||||||| | || || || ||||| || ||||||| |||||||| ||||| | |
Sbjct 18796 CCAACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCT 18855
Query 52561 AGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTG--AG-CATGTTCAAGGAGG 52617
| | | | | | | || | || || || | || ||| ||| ||||
Sbjct 18856 ---CTCACCTCAACAACAA---GCCATCAAACCAAGTCGTTGAAGACATCATCACCGAGG 18909
Query 52618 CGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGA 52677
| || | ||||| ||||||| | || | ||| || || | ||| || || ||||
Sbjct 18910 CTGTCGTCATCGAGCAGGAGTTCCTCACAGACGCCCTCCCATGTGCGCTCCTCGGAATGA 18969
Query 52678 ACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCG 52737
|||| || ||||||| | ||||||||||| || || || ||||| | || |||
Sbjct 18970 ACGCCAAGCTCATGTGCCAATACATCGAGTTCGTCGCCGACCGTCTCCTCCTGGCACTC- 19028
Query 52738 GGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTT 52796
|||| ||| ||| ||| ||||||| ||| || || || || ||| | ||||| || ||
Sbjct 19029 GGCAACCAGAAGCACTACAACGCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTC 19088
Query 52797 GAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
| |||||||||||||| ||||||||||| ||||| || ||
Sbjct 19089 GGAGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGATTA 19129
>seq360
Length=110533
Score = 104 bits (114), Expect = 2e-17
Identities = 144/197 (73%), Gaps = 5/197 (3%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| ||| || ||||||||||| || |||| |||
Sbjct 36743 CCTTCTGGATGTTGTAGTCGCTCAAAGTTCGGCCATCCTCGAGTTGCTTTCCGGCGAAGA 36802
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542
| | |||||||||||||| || || || || || || ||| | || | || | |||
Sbjct 36803 TCAATCGCTGTTGGTCCGGTGGGATTCCCTCCTTATC-CTGAATCTTGCTCTTGACGTTG 36861
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | |||||||| |||||||||||||| || | || || || || || || || ||
Sbjct 36862 -TCGATGGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCAC 36920
Query 138603 AAAAATCTGCATGGCTT 138619
||| | | |||| |||
Sbjct 36921 GAAACTGT-CATGACTT 36936
>seq5787
Length=111344
Score = 98.7 bits (108), Expect = 1e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| | || || |||||||||||| || ||||
Sbjct 90927 GACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGTTGCTTGCCGGCG 90868
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | ||||||||||| || || || || || ||||| ||| || || |
Sbjct 90867 AAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGACTTGACG 90808
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | ||||||||||| | || | ||| || ||||| ||||| ||
Sbjct 90807 TTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATCGTCTTGCCAGTGAGAGTCTTG 90748
Query 138601 ACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 90747 ACGAAGATCTGCAT 90734
Score = 84.2 bits (92), Expect = 2e-11
Identities = 124/173 (72%), Gaps = 2/173 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||||||||| | || ||| ||||| || || || || |
Sbjct 90699 GACTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGCCCATCCTCAAGCTGCTTTCCCGCG 90640
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAA 138539
|||| |||||||| ||||| ||||| || || || ||||| ||| || | || |
Sbjct 90639 AAGATGAGACGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTCACA 90580
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCA 138592
||| || | ||| || | ||||| ||||| | || | || || |||||||
Sbjct 90579 TTG-TCGATGGTATCCGAGGACTCAACCTCAAGGGTGATTGTCTTTCCAGTCA 90528
>seq351
Length=85052
Score = 87.8 bits (96), Expect = 2e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || || | ||| | ||| || || | | | |||||||| || ||||||||||||
Sbjct 50442 GCCACCACGGAGACGGAGAACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 50383
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| || || ||||||||| || || |||| |||| || |||||||||||||| ||
Sbjct 50382 GAGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGTGG 50323
Query 138507 TATACCTTCTTTGTCGGT 138524
|| ||||| ||||| ||
Sbjct 50322 AATGCCTTCCTTGTCTGT 50305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496224746090400
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