Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq407 176 6e-39 seq339 163 3e-35 >seq407 Length=91491 Score = 176 bits (194), Expect = 6e-39 Identities = 544/824 (66%), Gaps = 37/824 (4%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || ||||| ||||||||||||||||| ||||| || ||||| ||| |||||||| Sbjct 19130 GTAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCTCCGAGGGAGATGTTCTCCAT 19071 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGT-TGGCACCCCAAT--CTGTTTGAGGAG 127347 || || || ||||| | | ||| | | ||| || | | | | |||||| Sbjct 19070 GAAGTCGAAGGGGTTGGTAGCGTTGTAGTGCTTCTGGTTGCCGAGTGCCAG---GAGGAG 19014 Query 127348 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTT 127407 ||| || | |||| |||| ||||| | |||| || | |||||| |||| ||| Sbjct 19013 ACGGTCGGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGGAGCGC 18954 Query 127408 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGC 127467 ||||||||| ||||| || |||| ||| ||| ||| | ||||| || | |||| | Sbjct 18953 ACATGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGACGACAGCCTCGGTGATGATGTC 18894 Query 127468 GTGAATAGTGTCCACCCCAGGTCT-ATTGCGTAAAGTCTTGA----AGAGTTCCACAG-- 127520 | || | || ||| | || || | || ||| |||| | ||| Sbjct 18893 TTCAA------CGACTT--GGTTTGATGGCTTGTTGT--TGAGGTGAGAGAACAGCAGGC 18844 Query 127521 ---CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGAC 127577 |||| || ||| | |||||||||||||||||||| || || |||||| || | Sbjct 18843 AGGCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGC 18784 Query 127578 CTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGA 127637 | ||||||||||| ||||||||||||||||| |||| || || || |||||||||| Sbjct 18783 CGGGCATGAGACCACGCTTCTTCAACCAGAAGATCGATGCGAAAGATCCGGAGAAGAAGA 18724 Query 127638 TCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA- 127696 | ||||| | || || || | ||||| |||||||| | | | |||| | Sbjct 18723 TACCCTCAATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTG-GAGTTCTTGTCGGAG 18665 Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756 | |||| || |||||| | ||||| || ||| ||||||| | | | ||| || | Sbjct 18664 ATCCACCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTG 18605 Query 127757 AAGA-GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 127815 |||| || | | | || || || || ||||||| | || ||||| || ||||| Sbjct 18604 AAGAGGTACGTGCGTTGCT-TGGGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATGT 18546 Query 127816 TTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 127874 ||| ||||| | | ||| || | ||| | ||||||| |||| || ||| | Sbjct 18545 CTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGA 18487 Query 127875 TCTGTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCA 127933 | || || || || || || | | ||| ||||| || || ||||| || || Sbjct 18486 TTTGCACTTC-TCCGCTGAAGCGCTCGATGAGGTTCTCGTTGACGATGCCATCCGAAGCA 18428 Query 127934 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTC 127990 || || || ||||||| | ||||| | || | ||||| | | | ||| Sbjct 18427 GCGAAGAAGGCCAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGACGCTTGTTC 18368 Query 127991 CAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||||| |||||||| |||||||| | |||||| || ||||| Sbjct 18367 CAGTCGTGAAGATCCTTGGAGAGATCGATCTCCTCGGCGGTCCA 18324 >seq339 Length=67822 Score = 163 bits (180), Expect = 3e-35 Identities = 1162/1843 (63%), Gaps = 45/1843 (2%) Strand=Plus/Minus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 ||||||||||||| | | ||| | | || ||||||||||| || ||||| || | Sbjct 52405 TGAACTGAATGGGCGCAGACGCCGCCATGGTGCGAAGGTAGTACATGCCAGTCTTCAGGC 52346 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTT-TCCATG 115644 | |||||||| | | ||||| || | ||| | || ||| || | |||| Sbjct 52345 CGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATTTTGCCCA-TGGTGGGCTCCTTCATG 52287 Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704 || ||||| || || || ||||||||||| || || || || | ||| | || Sbjct 52286 TGGATGTTCAGGCTCTGAGACTGATCGATGAAAGCACCACGGTCAGCGGACATCTGAACG 52227 Query 115705 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 115764 | | | |||| ||||| || || |||| || ||| | ||||| ||||| Sbjct 52226 ATGTGGCGCTGGCTGATCTCCCAGACGGTCTTGTACAGAGCCTTGAGGTCATCGGGGATG 52167 Query 115765 TCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGAC 115824 | || ||||| || ||||| | || ||| | | |||||| | | |||| Sbjct 52166 TTTGGAATGCGCTGGATGGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCTGAC 52107 Query 115825 CAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCC 115884 ||||| ||| || | |||| || | | |||||||| |||||||| Sbjct 52106 CAGAGGCCACGCTCGACCAAGTCCTTCAGCAACCACGGGTTGACAACCTGGAACTCACCA 52047 Query 115885 GCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 115944 ||||| || | ||||||||| | ||||||||||| || ||||| ||| ||| Sbjct 52046 GCGAGCACACGACGGGAGTAGATGTTGCTGGTGTATGGCTCGAAACACTCGTTGAAGCCC 51987 Query 115945 AAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCC 116004 | ||| || | ||||| || || |||||||| || | ||| || |||||||| ||| Sbjct 51986 ATGATCTGCGAGGTGGACGCAGTTGGCATGGGAGCGACGAGGAGCGAGTTGCGGACACCA 51927 Query 116005 ACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT--GTCTCCCCCT 116062 | | || ||||||| ||| ||||||| || || | | | || | | Sbjct 51926 TGCTCGGCGATCTTGGCCTTGAGTGCGGCCCAGTCCCAGA-GATCAGTAGGAGTCACAC- 51869 Query 116063 CCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATG 116122 ||||||| || | ||||| || | ||| | || || ||||| ||||||| |||| Sbjct 51868 CCCACATGTCGTATTGGAGCTCGCCCTTGGAGACGGGGGACCCCTCGTATGTCTCGTATG 51809 Query 116123 GGCCCTCAACCT---CCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCT 116179 | || || || | || | ||| | || ||| || ||||| || || |||| Sbjct 51808 GTCC---AAGCTTGGCAGCGAGATCGCATGAGGCGGTGAGAGCAGCGTGGTAGATGGTCT 51752 Query 116180 CAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA- 116237 | || || | || | || | | |||| || ||||| | | || || | Sbjct 51751 CGAAGATCTGGATGTTGAGCTGGCGAG-CCTCAGGAGAGTCAAAAGGCATGCG-CAGAGC 51694 Query 116238 -AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAG 116296 || ||| |||| || ||||| | |||||| || || || || || || | | || Sbjct 51693 CAAGAAAG-CATCAGCAAGACCGTTGACACCAAGACCGATGGGACGGTGACGGAAGTTGC 51635 Query 116297 ACTTTCGAGCGGTCTC-CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 116355 ||| ||||| ||| |||||| || || ||||| | | | || | || ||| Sbjct 51634 TCTTGCGAGCT-TCTGGCACGGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTG 51576 Query 116356 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGT-CTCTTCATT 116414 ||||| || |||| | || ||||| ||| | || |||| || || ||| | Sbjct 51575 GTGACGGTCTGGGTGACCTGGTGGAGCTTCTCGAAGTCGAAAC-GCTCGTTCTCAATGTC 51517 Query 116415 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 116474 ||| || | || ||||||| || || || || ||||| | | ||| || | |||| Sbjct 51516 GACGTATGTGGGCAGGGCGAGAGATGCAAGGTTGCACACGGCGACCTCGTCAGGAGCAGT 51457 Query 116475 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 116534 |||||| ||||| || || || | ||| || || ||||| ||||||||||| || || Sbjct 51456 GTACTCGATAATCTCGGTGCAGAGATTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGTT 51397 Query 116535 TGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGA 116594 ||| |||| || ||||||||||| || ||||| || || ||||| ||||| | Sbjct 51396 GCTCTTGCTGTTGGCAGCGTCCTTGTAGAGGATGTATGGGGTACCGGTCTCGGTTTGAGC 51337 Query 116595 CTTGAGAATAGCCTTCCATACATCGGCGGCTG-GCACAGTGGCGTTGGCTCGCCCCT--- 116650 || ||| || || | ||| | || ||| || | | || | | || |||| Sbjct 51336 CTCGAGGATGGCATACCAGA-----GCTTCTGAGCGC--GGACGGTCTCACGACCCTTGC 51284 Query 116651 CCTC---CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCC 116707 |||| |||||| ||| || |||| ||||| | || | || | || | Sbjct 51283 CCTCACGCTCGTATCGCTCGTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGAC 51224 Query 116708 CTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 116767 | || || | || || | | || ||| | | |||||| |||||||||| Sbjct 51223 CGGGGCACTCGTGAGGGCACATCAAAGTCCAGGTGGTATTTTGCTCAACACGCTTCATGA 51164 Query 116768 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 116827 |||| ||||||| ||| || | |||| ||||| ||| ||| | || || | || | Sbjct 51163 AGAGATCTGGGACCCACAGACCGTAGAACAGATCGCGAGCACGAACCTCCTCCTTTCCGT 51104 Query 116828 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 116887 | || || | ||||| ||| | || ||| |||||||| || || | ||||| | Sbjct 51103 GGTTCTTGCGGAGATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGG 51044 Query 116888 CGATTG-ACC-CCTTGC--GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAAT 116943 | | | ||| | || | | || |||||| || || | || || |||||| Sbjct 51043 CAAAAGCACCAGGTCGCTTGTTG-CCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAAC 50985 Query 116944 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTG 117003 || || ||||| || | || ||| | ||| || || || || | || | | Sbjct 50984 ACACGCAGCATGGGTACGAGACCGTTGGATGTTCCGTTGGTGCCGCTGATGTATGCTCCG 50925 Query 117004 TTGGCTCTGACATC-GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGC 117062 | || | || || ||||| || | ||||| || || || ||| ||||| || Sbjct 50924 GTTGCGC-GAATTCTGTGGACGTTGAGCCCAATGCCTCCGGCGTTCTTGGAGATCATGGC 50866 Query 117063 GCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAA 117122 ||| | | | || ||||||||||||| || |||| | || | |||||||||| Sbjct 50865 GCAGGTCTTTAATGTGTCGTAGATCCCATCAATGCTGTCATCTTTCATGTCGATGAGGAA 50806 Query 117123 GCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGAT 117182 |||| | || ||| | | ||||| |||||| |||| || || || | ||| || | Sbjct 50805 GCAGGATGCCAGTTGAGCGTTGGGTGTTCCAGCGCTGAACAGCGTAGGCGACGCATGTGT 50746 Query 117183 GAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGT 117241 ||| ||| | | ||||| | | ||||||||| | | | || ||||| || |||| Sbjct 50745 GAA-GTACTTGTTCGACATGTAGTTGTAGGTCTCAATGGCGGACTCGATGTCCTCGCCGT 50687 Query 117242 GAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGA 117301 | || |||| | || ||||| | ||| | ||| ||| | || | | || | || Sbjct 50686 GGATGCCGACGGCCACACGCATGATCATCTGTTGTGGTCTCTCGGCAACCTTGCCGTTGA 50627 Query 117302 GCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 117344 |||| ||||| | |||||| ||||||| ||||| || Sbjct 50626 TCCTCAAAAGGTATGACCTCTCCAGCGTCTTGAATCCAAAGTA 50584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613460650141200