Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq5787 134 2e-26 seq351 98.7 1e-15 >seq5787 Length=111344 Score = 134 bits (148), Expect = 2e-26 Identities = 147/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| ||||| |||||||||||||| Sbjct 90925 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 90866 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||| ||||| | || | || |||||||||| |||||| ||||| ||| Sbjct 90865 GATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGACTTGA-CGT 90807 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || ||||| |||| ||||| || ||||| || || || || | Sbjct 90806 TGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATCGTCTTGCCAGTGAGAGTCTTGA 90747 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 90746 CGAAGATCTGCAT 90734 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||| | ||||| |||| || |||||||| || || ||||| || || Sbjct 91188 CCTCCACGCAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAA 91129 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || |||| || ||||||||||||||||| || | |||||| || || | || Sbjct 91128 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGGG 91069 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 46545 | | ||||||||| |||||| ||| | ||| | | | ||||| || ||||| Sbjct 91068 ATACCCTCCTTGTCTTGAATCTTCGACTTCA-CGTTGTCGATTGTGTCTGATGACTCCAC 91010 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||| || ||||| || || || || || ||||||||||| Sbjct 91009 TTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAGATTTGCAT 90962 >seq351 Length=85052 Score = 98.7 bits (108), Expect = 1e-15 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || || || |||| |||||||||||||||||||| Sbjct 50406 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 50347 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| |||||| ||||| | || | || |||||||| Sbjct 50346 GATCAGGCGCTGTTGGTCCGGTGGAATGCCTTCCTTGTC 50308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565195512536400