Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq407 343 1e-89 seq5787 122 9e-23 seq351 100 3e-16 seq360 91.5 1e-13 >seq407 Length=91491 Score = 343 bits (380), Expect = 1e-89 Identities = 594/850 (70%), Gaps = 25/850 (3%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 ||||| || || || || ||||| || || || || || || | | ||| ||| | Sbjct 19135 TTTTGGTAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCTCCGAGGGAGATGTTC 19076 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720 ||| || || |||||||||| | |||||||||||| | |||||| | | | | Sbjct 19075 TCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTGCTTCTGGTTGCCGA---GTGCCAGG 19019 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAG 132779 || || | |||||| ||||||||||||||||| ||||| | || || || | ||| || Sbjct 19018 AGGAGACGGTCGGCGACGAACTCGATGTATTGGCACATGAGCTTGGCG-TTCATTCCGAG 18960 Query 132780 CAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGA 132838 || ||||| || || || || ||||| || ||||||||| |||| || ||||||| Sbjct 18959 GAG-CGCACATGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGACGACAGCCTCGGTGA 18901 Query 132839 CGATTTCCCTAACG-CGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAA 132897 ||| || |||| | | | | | |||| | || ||||| || ||| Sbjct 18900 TGATGTCTTCAACGACTTGGTTTGATGGCTTGTTGTTG-AGGTGAGAGAACAGCAGGCAG 18842 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 ||||||||| |||| ||||||||| | ||| ||||| |||||| ||| || | |||| Sbjct 18841 GCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCG 18782 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 |||||||| || || || || | ||| || || | |||||| || || ||||||| Sbjct 18781 GGCATGAGACCACGCTTCTTCAACCAGAAGATCGATGCGAAAGATCCGGAGAAGAAGATA 18722 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATC 133077 ||||| | ||| || || || | || || | | || |||| | ||| || |||| Sbjct 18721 CCCTCAATGGCGGCAAAGGCGATGAGACGGCAGGCAAAGGTGGAGTTCTTGTCGGAGATC 18662 Query 133078 CAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAAC 133137 || ||||||||||| || ||||| | || ||| || || | ||||||||||| || Sbjct 18661 CACCGCAGCGCCCAGTCAGCCTTCTTACGGATGCATGGGATGTTGTCGATGGCGTTGAAG 18602 Query 133138 AA--ACG-GAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACA 133192 | ||| | ||| || || ||| | ||| |||||||||||| || || Sbjct 18601 AGGTACGTGCGTTGCTTG-----GGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATG 18547 Query 133193 TTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCA 133252 | || ||||| | ||||||||| ||| || |||||||| ||||| || |||||| | Sbjct 18546 TCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGA 18487 Query 133253 CCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGG 133312 ||||||||| ||| ||||||| || || |||||||||||||| || || | Sbjct 18486 TTTGCACTTCTCCGCTGAAGCGCTCGATGAGGTTCTCGTTGACGATGCCATCCGAAGCAG 18427 Query 133313 CGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC---TCCC 133369 |||| |||||||| ||||| |||||| |||||||| |||||| | ||| | || Sbjct 18426 CGAAGAAGGCCAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGACGCTTGTTCC 18367 Query 133370 AGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTT 133429 ||||| | |||||||| || || | ||||||| ||||||| || || |||||||| | Sbjct 18366 AGTCGTGAAGATCCTTGGAGAGATCGATCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCT 18307 Query 133430 TTTTGTACAT 133439 |||||||||| Sbjct 18306 TTTTGTACAT 18297 >seq5787 Length=111344 Score = 122 bits (134), Expect = 9e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || |||||| | || || ||| | | Sbjct 90734 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACGATCACCTTGGAGGTGGAGTCTTCG 90793 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||| ||||| |||||| | ||||| Sbjct 90794 GACACCATCGACAACG-TCAAGTCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCA 90852 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||| ||||| || || || |||| ||||| ||| |||||||| Sbjct 90853 ACAGCGATTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACGCTCTCGGACTACAA 90912 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| ||||||| ||| | || || || Sbjct 90913 CATCCAGAAGGAGTCGACGCTCCATCTCGTCCTCCG 90948 Score = 114 bits (126), Expect = 1e-20 Identities = 104/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| ||||| ||||| | ||||| ||||| ||||| | |||||| || Sbjct 90590 AAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGTCTCATCTTCGCGGGAAAG 90649 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||||| || || | ||||||||||| |||||||||||| || ||||| | || || || Sbjct 90650 CAGCTTGAGGATGGGCGCACCCTCAGCGACTACAACATTCAGAAGGAGTCCACTCTCCAC 90709 Query 38448 TTGGTGCTGCG 38458 ||||||||||| Sbjct 90710 TTGGTGCTGCG 90720 >seq351 Length=85052 Score = 100 bits (110), Expect = 3e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| || || ||||| | ||||||||||| || || | ||| ||||| ||||| || Sbjct 50308 GACAAGGAAGGCATTCCACCGGACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 50367 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| || |||||| ||||||||||||||| ||||| |||| || || ||||| || Sbjct 50368 GACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTTCTC 50427 Query 38457 CGT 38459 ||| Sbjct 50428 CGT 50430 >seq360 Length=110533 Score = 91.5 bits (100), Expect = 1e-13 Identities = 132/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| || |||||| |||| || ||| | |||||| | | Sbjct 36923 TTCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCCGACACCATC 36864 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || || | || || |||||||| || | ||||||||||| Sbjct 36863 GACAACG--TCAAGAGCAAGATTCAGGATAAGGAGGGAATCCCACCGGACCAACAGCGAT 36806 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| || || || || || || | || || | | ||||||||||||||| | Sbjct 36805 TGATCTTCGCCGGAAAGCAACTCGAGGATGGCCGAACTTTGAGCGACTACAACATCCAGA 36746 Query 38431 AGG 38433 ||| Sbjct 36745 AGG 36743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500134849388800