Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq445 271 1e-67 seq467 113 6e-20 seq5794 98.7 1e-15 seq539 86.0 8e-12 >seq445 Length=88944 Score = 271 bits (300), Expect = 1e-67 Identities = 516/757 (68%), Gaps = 12/757 (2%) Strand=Plus/Minus Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463 |||| |||| ||| ||||| ||||| | |||||| | ||| | ||||| | Sbjct 4676 CTTTTTTATTTTTGCGTTTGAACTCATTGACGAAGTGGTTGACGAGGCGGTTGTCGAAGT 4617 Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523 | ||||||||||| || || || || || || | ||||| || ||||| || | |||| Sbjct 4616 CCTCACCACCCAAATGAGTGTCTCCGGCAGTGGACTTGACCTCGAAGATGCCCTCCTCAA 4557 Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583 || | | | || ||||| || || ||||| |||| ||| || ||||| ||||| | Sbjct 4556 TGGTAAGAAGAGAGACATCGAAGGTGCCACCGCCCAAGTCGAAGATGAGCACGTTGCGCT 4497 Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 || | || | ||||| ||||||||||| || || ||||| || || || ||||| || | Sbjct 4496 CGCCCTCAGTCTTCTTGTCGAGACCGTAGGCAATGGCCGCGGCGGTAGGCTCATTGATGA 4437 Query 7644 TACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAAT 7703 | || ||| ||||||||| || || | || || || || ||||| || || || | Sbjct 4436 TGCGCAGAACGTTCAGGCCGGCGATGAGACCAGCGTCCTTGGTTGCTTGGCGCTGAGAGT 4377 Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 |||| ||||| || ||||| || ||||| |||| ||||| | ||| || || | | Sbjct 4376 CGTTGAAGTATGCTGGGACAGTGACGACAGCGTTGTTGACTGTGCCACCAAGGTATGCCT 4317 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823 |||| | || ||| ||||| || ||||| ||||| ||||| || | | ||||| | Sbjct 4316 CCGCAGTCTCACGCATCTTGGTGAGGACCATTGATGAGATCTCCTCTGGTGTGAACTGCT 4257 Query 7824 TCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---GGGGATAA 7880 || || || || || || || | | | || || || |||| | ||| | Sbjct 4256 TCTCCTCGCCCTTGAACTCGACCTGCACGACCGGCTT----GC--CACCCTTGTTGATGA 4203 Query 7881 CCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGA 7940 |||| | | | | ||||| ||| | || |||| || ||||| | |||| Sbjct 4202 CCTTGAAGGGAAAGTGCTTCATGTCGGCCTGCACCTCAGCATCGTCGAACTTCCGGCCGA 4143 Query 7941 TAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCG 8000 | || ||||| || || || |||||||| |||||||||||| ||||||||| || | Sbjct 4142 TCAGGCGCTTGGCGTCGAAGACTGTGTTGACGGGGTTCATGGCGACTTGGTTCTTTGCGG 4083 Query 8001 CGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGAT 8060 || ||||| ||||| || | || || || |||||| |||| || || || || | Sbjct 4082 AATCACCGATGAGACGCTC---GGTGTCGGTGAAGGCGACGAACGAGGGTGTTGTGCGGT 4026 Query 8061 TCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAAT 8120 | || |||||||| || || || || | |||||| | | ||| ||| || || || | Sbjct 4025 TACCCTGGTCGTTGGCGATGATCTCAATGCGGTCATCTCTGTAGATGCCCACACATGAGT 3966 Query 8121 ACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157 | || || || ||||| |||||||||||| | | ||| Sbjct 3965 AGGTCGTACCCAAATCGATACCGATTGCTGGTGCCAT 3929 Score = 168 bits (186), Expect = 8e-37 Identities = 267/383 (70%), Gaps = 0/383 (0%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||||||||| ||||| | || ||||| ||||| ||||| |||||||| Sbjct 5123 TCACCGGAGAGGATGGCGGCCTGGACGGCGGCACCGTAGGCGACGGCCTCGTCGGGGTTG 5064 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || | || || ||||| || | || || | ||| | || | || ||| Sbjct 5063 ATGGAGCGGTTGGGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGACCTTGGGG 5004 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || |||||||||||||| ||||| || | || || || |||||||| | | Sbjct 5003 ATACGGGTGGATCCACCGACCAAGACGATCTCGTGGACGGAGGACTTGTCGATCTTGGCG 4944 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || ||||| || ||||| ||||| | |||| |||| ||| Sbjct 4943 TCGCGGAGAGTGCGCTCGACGGGCTCCATGGTGGAGCGGAAGAGGTCCTGGCACAACTCC 4884 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || |||||||| ||||| || || || || || || ||||| | ||| || || Sbjct 4883 TCGAAGCGGGCACGGGTGATGGAGGTGTAAAAGTCGACACCCTCGTAGAGCGAGTCGATC 4824 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || |||| || ||||| | ||||| | || ||||| |||||||| || || || || Sbjct 4823 TCGATGGAGGTCTGTGCGGAGGAAGAGAGAGTGCGCTTCGCGCGCTCGCAAGCGGTGCGC 4764 Query 7370 AAACGACGAAGGGCACGCGGGTT 7392 | ||| || ||||| || | ||| Sbjct 4763 AGACGGCGGAGGGCGCGGGCGTT 4741 >seq467 Length=92620 Score = 113 bits (124), Expect = 6e-20 Identities = 223/327 (68%), Gaps = 5/327 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | || || || || ||||| | | || || || | ||| Sbjct 30051 TCGAAATCCTCACCACCGAGATGGGTGTCACCGGCGGTAGACTGAACCTCGAACACACCC 30110 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA-GTAC 7575 |||| | | || | || ||||| || ||||||||||| || || | | || | | Sbjct 30111 TGGTCAACGGTCAAGACGGAGACATCGAAAGTACCACCACCGAGATCGTAGACGATGATC 30170 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 ||| || | ||| | |||| ||||| ||||| || | ||| || || || || || Sbjct 30171 TGGCGT-TCCTTGTC---GGTCTTGTCGAGGCCGTAGGCCAAAGCGGCGGCGGTGGGCTC 30226 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 |||| | || ||| ||| || ||||| || | | ||||| || || || || Sbjct 30227 GTTAACCACGCGGAGAACGTTGAGACCAGCGATCGCGCCGGCATCCTTGGTGGCGGCACG 30286 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || | ||||| |||||||| ||||| || ||||| |||| ||||| |||| ||||| Sbjct 30287 CTGAGCGTCGTTGAAGTAGGCTGGGACAGTGACGACTGCGTTGGTGACCTTCTCTCCGAG 30346 Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782 || || || |||| || ||||| || Sbjct 30347 GTAGGACTCGGCGACCTCCTTCATCTT 30373 >seq5794 Length=85075 Score = 98.7 bits (108), Expect = 1e-15 Identities = 212/315 (67%), Gaps = 3/315 (1%) Strand=Plus/Plus Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527 |||||||||||| || || || ||||| || ||||| |||| ||| || | |||| Sbjct 31267 ACCACCCAAGTGAGTGTCACCAGCGGTAGCCTTGACAGTGAAGACACCACCCTGGATGTG 31326 Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587 | | ||| ||||| || || |||||||| || || | || || ||||| || | Sbjct 31327 GAGAAGCGAGACATCGAAAGTGCCACCACCAAGATCGTAGATCAGGACGTTGCGCTCCTT 31386 Query 7588 GTC--TTTGTTCTTAT-CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAAT 7644 ||| | | | || | |||||||| || || || || || || || || || || || Sbjct 31387 GTCCGACTTTCCGGATCCAAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCGTTGATGAT 31446 Query 7645 ACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704 ||| ||| ||| ||||||| || | | || || || || ||||| | || || Sbjct 31447 ACGGAGAACGTTGAGGCCAGAGATGGCACCGGCGTCCTTGGTAGCTTGCCTCTGGTTGTC 31506 Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764 ||| ||||| || || || || | ||| || | | ||| ||||| ||||| | || Sbjct 31507 GTTGAAGTATGCGGGAACGGTGATGACGGCCTTGGAGACCTTCTTGCCGAGCTTGACCTC 31566 Query 7765 CGCGATATCTTTCAT 7779 ||||| || ||||| Sbjct 31567 AGCGATTTCCTTCAT 31581 >seq539 Length=16636 Score = 86.0 bits (94), Expect = 8e-12 Identities = 119/162 (73%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA-CAGT 7655 ||| ||||||||||| |||| || || || || || || || || | ||| || |||| Sbjct 4889 CTTCTCGAGACCGTAGGCGAGGGCAGCAGCGGTAGGCTCGTTGATCACACGGTGAACAGT 4830 Query 7656 TCAGGCCAGCAATAGTTGCC--GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 ||| |||| ||| ||| | ||||| || || ||||||| ||| ||||||||||| Sbjct 4829 -CAGACCAGAAAT--TTGACCGGCATCCTTGGTTGCTTGTCTCTGCTGGTCGTTAAAGTA 4773 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| || || || || || |||| | ||| ||||| ||||| Sbjct 4772 GGCGGGAACAGTGACAACGGCGTTCTTGATGTTCTTTCCGAG 4731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635084609298800