Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq339 161 1e-34 seq407 114 2e-20 seq271 91.5 2e-13 >seq339 Length=67822 Score = 161 bits (178), Expect = 1e-34 Identities = 929/1460 (64%), Gaps = 53/1460 (4%) Strand=Plus/Plus Query 111933 CCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCG-CAA 111991 || ||||| || || |||||| ||| || ||||| || |||| ||||| | ||| Sbjct 50971 CCCATGCTGCGTGTGTTTAACAACACCGCTCGCTACGTCGACCA----GGGCGGCAACAA 51026 Query 111992 GGGATCTA------TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCT 112045 | || || | || | || | |||||||||||||| ||| || | ||| | Sbjct 51027 GCGACCTGGTGCTTTTGCCATGTACATCGAGCCATGGCACGCAGATGTCTTCTCCTTCTT 51086 Query 112046 TGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTC 112104 || | || ||||| || | ||||||| || ||| |||||||| |||| || || Sbjct 51087 GGATCTCCGCAAGAACCACGGAAAGGAGGAGGTTCG-TGCTCGCGATCTGTTCTACGGTC 51145 Query 112105 TCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTT 112164 | ||| | |||||||||||||||||| | |||||| | | | || ||| || | | | Sbjct 51146 TGTGGGTCCCAGATCTCTTCATGAAGCGTGTTGAGCAAAATACCACCTGGACTTTGATGT 51205 Query 112165 GTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACA 112224 | || || || |||||||| | |||| | || | ||||| || | || ||| Sbjct 51206 GCCCTCACGAGTGCCCCGGTCTGGCTGATGTCTACGGCGCTGAGTTCGAGGAGCTGTACG 51265 Query 112225 CAAAGTACGAGGAAGA----AAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTG 112279 |||||| || ||| || || || ||| || | ||| | || | | || Sbjct 51266 AGCGATACGAGCGTGAGGGCAAG--GGTCG--TGAGACCGTCCGCGCT-CAGAAGCTCTG 51320 Query 112280 GAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGC 112339 | | || || ||| || ||||||||||||| ||||| ||||| || || ||||| ||||| Sbjct 51321 GTATGCCATCCTCGAGGCTCAAACCGAGACCGGTACCCCATACATCCTCTACAAGGACGC 51380 Query 112340 CTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTAC 112399 ||| ||||| || || ||||| ||||| ||| || ||||| ||||| || Sbjct 51381 TGCCAACAGCAAGAGCAACCAGAAGAACTTGGGAACCATCCGCAGCTCCAATCTCTGCAC 51440 Query 112400 AGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGC 112459 || || | || | || | || ||| || ||||| ||||| ||||| |||| Sbjct 51441 CGAGATTATCGAGTACACTGCTCCTGACGAGGTCGCCGTGTGCAACCTTGCATCTCTCGC 51500 Query 112460 TCTCCCCAAGTATGTGGATCCAGAGACAAAGA-CATTT-GATTATGAAAAACTCCACGAA 112517 || |||| || || || || || || || | ||| || | || || |||||| | Sbjct 51501 CCTGCCCACATACGTCGA--CATTGAGAACGAGCGTTTCGACTTCGAGAAGCTCCACCAG 51558 Query 112518 GTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT- 112576 || || | || ||||| || ||| | |||| | || || || |||||||| Sbjct 51559 GTCACCCAGACCGTCACCAAGAACTTGAACAAGATCATCGAGGTCAACCACTACCCCGTG 51618 Query 112577 TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCT 112636 ||| ||||| || || | | |||||||| || ||||| |||||| | ||||| Sbjct 51619 CCAGA-AGCTCGCAAGAGCAACTTCCGTCACCGTCCCATCGGTCTTGGTGTCAACGGTCT 51677 Query 112637 CGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCA 112695 || |||| ||| | || || ||| | ||||| || || || | ||| Sbjct 51678 TGCTGATGCTTTCTTGGCTCTG-CGCATGCCTTTTGACTCTCCTGAGGCTCGCCAGCTCA 51736 Query 112696 ATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT-------TGAGGCGAGTTCGGAG 112748 | | || || ||||| || || ||||| ||||| | | |||| || | Sbjct 51737 ACATCCAGATCTTCGAGACCATCTACCACGCTGCTCTCACCGCCTCATGCGATCTC---G 51793 Query 112749 TTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GT 112807 || || || | ||| ||||| || || | ||||| || || | || |||||| | Sbjct 51794 CTGCCA-AGCT---TGGACCATACGAGACATACGAGGGGTCCCCCGTCTC-CAAGGGCGA 51848 Query 112808 GCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGACGCTCTC 112865 ||| |||| || ||||||| |||| || | || || || ||||||| ||| ||| Sbjct 51849 GCTCCAATACGACATGTGGG-GTGTGACTCCTA-CTGATCTCTGGGACTGGGCCGCACTC 51906 Query 112866 AAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACA 112925 |||| ||| ||| | ||| | || ||| || | | || || |||||||| Sbjct 51907 AAGGCCAAGATCGCCGAGCATGGTGTCCGCAACTCGCTCCTCGTCGCTCCCATGCCAACT 51966 Query 112926 GCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATC 112985 || |||||| | || ||| |||| || || || || || || ||||| | |||||| Sbjct 51967 GCGTCCACCTCGCAGATCATGGGCTTCAACGAGTGTTTCGAGCCATACACCAGCAACATC 52026 Query 112986 TATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGAC 113045 || | | ||||| || ||||| | |||||||| | | || | ||| Sbjct 52027 TACTCCCGTCGTGTGCTCGCTGGTGAGTTCCAGGTTGTCAACCCGTGGTTGCTGAAGGAC 52086 Query 113046 CTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGT 113105 | ||| ||| |||||||| | | |||||| | | ||| | | |||||| Sbjct 52087 TTGGTCGAGCGTGGCCTCTGGTCAGACAACATGAAGAACCGCATCATCGCCGATGGTGGT 52146 Query 113106 TCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGG 113165 ||||| || ||| | || || ||||| | ||| ||||| || || ||| Sbjct 52147 TCCATCCAGCGCATTCCAAACATCCCCGATGACCTCAAGGCTCTGTACAAGACCGTCTGG 52206 Query 113166 GAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAA 113225 || |||| | | || || | ||| |||| || |||||| ||||| ||||| Sbjct 52207 GAGATCAGCCAGCGCCACATCGTTCAGATGTCCGCTGACCGTGGTGCTTTCATCGATCAG 52266 Query 113226 AGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCAC 113285 ||| || |||| | |||| | || || ||| ||| || | |||||| Sbjct 52267 TCTCAGAGCCTGAACATCCACATGAAGGAGCCCACCATGGGCAAAATCACCAGCATGCAC 52326 Query 113286 ATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGATCTAAGGCAAAG 113345 | | | |||||| || || || || || ||||| ||||| || | | ||| | Sbjct 52327 TTCGCCGGCTGGAAGCTCGGCCTGAAGACTGGCATGTACTACCTTCGCACCATGGCGGCG 52386 Query 113346 GC-GCGCCCAATTCAGTTCA 113364 | |||||| |||||||||| Sbjct 52387 TCTGCGCCC-ATTCAGTTCA 52405 >seq407 Length=91491 Score = 114 bits (126), Expect = 2e-20 Identities = 175/244 (72%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 102090 CTCTTTGAAGCCATCCA-AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAA 102148 ||||| | |||||| | |||| | ||||| || | ||||| || || ||||| || Sbjct 18600 CTCTTCAACGCCATCGACAACA-TCCCATGCATCCGTAAGAAGGCTGACTGGGCGCTGCG 18658 Query 102149 GTGGTT-TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTG 102207 |||| | | |||| | | ||||||| || ||| |||| ||||| ||| Sbjct 18659 GTGGATCTCCGACAAGAACTCCA-CCTTTGCCTGCCGTCTCATCGCCTTTGCCGCCATTG 18717 Query 102208 AGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCA 102267 |||||||||||||||| || || ||| | || | ||| | |||||||| ||||||| Sbjct 18718 AGGGTATCTTCTTCTCCGGATCTTTCGCATCGATCTTCTGGTTGAAGAAGCGTGGTCTCA 18777 Query 102268 TGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGT 102327 |||| || ||| ||||||||||||||| ||||| ||||||||||| | ||| || | Sbjct 18778 TGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGACT 18837 Query 102328 TTGC 102331 |||| Sbjct 18838 TTGC 18841 >seq271 Length=208823 Score = 91.5 bits (100), Expect = 2e-13 Identities = 195/289 (67%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791 || || |||||||| || ||||| | ||| ||| ||||||||||| | | | ||||| Sbjct 125925 AGGCCTTTGATGTGAGAGCCGTCATGATCTTGATCGGTCATGATCATCAAATGGCCATAT 125984 Query 176792 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAG 176850 || |||||| |||| || ||||| || || || ||||||| |||||||| Sbjct 125985 CGCAAGCTCTTTG-CATCGGTGTACTCCTTCTTGTGCTGGAGCCCCAAGAACTTCTTGAT 126043 Query 176851 ATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTACA 176910 | | || ||| ||| | | ||| ||||| ||||| ||||| ||| Sbjct 126044 GTTCTGGATCTCAGCGTTCTTCGAAATCTGATCAACAGATGCATCGCGAACGTTCAAGAT 126103 Query 176911 CTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAAC 176970 ||| || || | |||||||||||| |||| ||| || ||||||| | || || | Sbjct 126104 CTTTCCTCGCAACGGGAAGACACCGAAGTGGTCGGGATTGACCACAGCACGTCCAGCCAG 126163 Query 176971 CGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTG 177019 || ||| ||||||||||| || |||| ||| || |||||| || Sbjct 126164 GGCAAGCAGGGCAGCAGAATCACCTTCAGTCAAGATCAGAGTACACCTG 126212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620695301170400