Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq339 205 1e-47 >seq339 Length=67822 Score = 205 bits (226), Expect = 1e-47 Identities = 1098/1721 (64%), Gaps = 59/1721 (3%) Strand=Plus/Minus Query 109509 CTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTG 109565 |||||||||||||||||| |||||| ||||| | ||| | ||||| | || | Sbjct 52272 CTGAGACTGATCGATGAAAGCACCACGGTCAGCGGACATCTGAACGATGTGGCGCT---G 52216 Query 109566 GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTT 109625 ||| || |||||||| |||||||||| | ||||| |||||||| |||| ||| Sbjct 52215 GCTGATCTCCCAGACGGTCTTGTACAGAGCCTTGAGGTCATCGGGGATGTTTGGAATGCG 52156 Query 109626 TTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGAC 109685 || || || |||||| | | ||| | | |||||| | | |||||||| || Sbjct 52155 CTGGATGGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCTGACCAGAGGCCACG 52096 Query 109686 CTTTTTGAGATCGT-CAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGC 109744 || | || | || ||| | |||||| || || |||||||| || | Sbjct 52095 CTCGACCAAGTCCTTCAGCAACCA-CGGGTTGACAACCTGGAACTCACCAGCGAGCACAC 52037 Query 109745 GTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTG 109804 | ||| ||||||||| | ||||| || ||||||||||| ||| ||| | ||| || | Sbjct 52036 GACGGGAGTAGATGTTGCTGGTGTATGGCTCGAAACACTCGTTGAAGCCCATGATCTGCG 51977 Query 109805 CAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT--TCGTCTT 109862 ||||| || || ||||||||||| | ||| || ||| |||| ||| | ||| | Sbjct 51976 AGGTGGACGCAGTTGGCATGGGAGCGACGAGGAGCGAGTTGCGGACACCATGCTCGGCGA 51917 Query 109863 TACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCA 109922 | || | | | |||| |||| || | || || || |||| |||| ||| Sbjct 51916 TCTTGGC-CTTG-AGTGCGGCCCAGTCCCAGAGATCAGTAGG---AGTCACACC---CCA 51865 Query 109923 CATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCC 109982 ||| || ||| || | |||| | | || || |||| | | ||||||| | || Sbjct 51864 CATGTCGTATTGGAGCTCGCCCTTGGAGACGGGGGACCCCTCGTATGTCTCGTATGGTCC 51805 Query 109983 CTCAACCTCGGCC---AACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAA 110039 || || ||| | ||| |||| || || || || || || || ||||| || Sbjct 51804 ---AAGCTTGGCAGCGAGATCGCATGAGGCGGTGAGAGCAGCGTGGTAGATGGTCTCGAA 51748 Query 110040 AATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CACAAAGAATAA 110098 || || || | |||||| ||| | |||| || || | | || | || || Sbjct 51747 GATCTGGATGTTGAGCTGGCGAGCCTCAGGAGAGTCAAAAGGCATGCGCAGAGCCAAGAA 51688 Query 110099 ACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTC 110158 | |||| || ||||| | ||||| ||||| ||||| || || | ||| || || Sbjct 51687 AG-CATCAGCAAGACCGTTGACACCAAGACCGATGGGACGGTGACGGAAGTT---GC-TC 51633 Query 110159 GAGC-AGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTC 110214 || || |||| |||||||| |||| ||||||| | || | ||||| || Sbjct 51632 TTGCGAGCTTCTGGCACGGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTCTTGGTG 51573 Query 110215 ACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAA-CGTTTTCGT-CTCCTTATTGA 110272 || |||| |||| | ||||| || ||| | ||||| || | ||| ||| | | || Sbjct 51572 ACGGTCTGGGTGACCTGGTGGAGCTTCTCGAAGTCGAAACGCT--CGTTCTCAATGTCGA 51515 Query 110273 CATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGT 110332 | ||| |||| || || | ||| ||||| |||||||| | |||||| | |||| Sbjct 51514 CGTATGTGGGCAGGGCGAGAGATGCAAGGTTGCACACGGCGACCTCGTCAGGAGCAGTGT 51455 Query 110333 ATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCG 110392 | || | ||| || || || | ||||| || ||| |||||||||||||| || Sbjct 51454 ACTCGATAATCTCGGTGCAGAGATTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGTTGC 51395 Query 110393 ATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACT 110452 ||| |||| || ||||| ||||| |||||||||||||| || || || || | || Sbjct 51394 TCTTGCTGTTGGCAGCGTCCTTGTAGAGGATGTATGGGGTACCGGTCTCGGTTTGAGCCT 51335 Query 110453 TGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCC 110511 ||| ||||| | ||| | | || | ||| |||| || | | | || || | Sbjct 51334 CGAGGATGGCATACCAGAGCTTCTG-AGCGCGGACGGTCTCACGACCCTTGCCCTCACGC 51276 Query 110512 TCGTACTTGGT-GTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGC 110570 ||||| | | | ||||| ||||| || || ||||| ||||||| ||||| Sbjct 51275 TCGTA-TCGCTCGTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCA 51217 Query 110571 CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTC 110630 || || || || | | | ||| | | | |||||| | ||||||||| || || Sbjct 51216 CTCGTGAGGGCACATCAAAGTCCAGGTGGTATTTTGCTCAACACGCTTCATGAAGAGATC 51157 Query 110631 AGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAG 110690 || | ||||| | |||| || || || |||| |||| || | || ||||| Sbjct 51156 TGGGACCCACAGACCGTAGAACAGATCGCGAGCACGAACCTCCTCCTTTCCGTGGTTCTT 51097 Query 110691 GCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGA 110750 ||| || ||||| ||| | || ||| | ||||||||| |||| || | || | | Sbjct 51096 GCGGAGATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCAAAAGC 51037 Query 110751 TCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCT 110804 || | | || || |||||| || ||||| || ||| || || || | Sbjct 51036 ACC---AGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACG 50980 Query 110805 GAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGG 110863 ||||| || | | || | |||| || || || || || || | || | || | Sbjct 50979 CAGCATGGGTACGAGACCGTTGGATGTTCCGTTGGTGCCGCTGATGTATGCTCCGGTT-G 50921 Query 110864 CACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-C 110922 | ||||| ||||| | | ||||| || || || ||| || || || Sbjct 50920 CGCGAATTCTGTGGACGTTGAGCCCAATGCCTCCGGCGTTCTTGGAGATCATGGCGCAGG 50861 Query 110923 TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAA 110982 ||| | | ||| | || || |||||||| || | || || | || || ||||| Sbjct 50860 TCT-TTAATGTGTCGTAGATCCCATCAATGCTGTCATCTTTCATGTCGATGAGGAAGCAG 50802 Query 110983 GAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAAC 111042 || | || |||| || ||||| || |||| || ||||| | |||||| ||| Sbjct 50801 GATGCCAGTTGAGCGTTGGGTGTTCCAGCGCTGAACAGCGTAGGCGACGCATGTGTGA-- 50744 Query 111043 AGACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAA 111100 || |||| ||||| | |||||| || || | ||||| | || | ||||| | Sbjct 50743 AGTACTTGTTCGACATGTAGTTGTAGGTCTCAATGGCGGACTCGATGTCCTCGCCGTGGA 50684 Query 111101 TACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACAC 111160 | || | ||| || ||||||| ||| | ||| || | ||| | ||| || | | | Sbjct 50683 TGCCGACGGCCACACGCATGATCATCTGTTGTGGTCTCTCGGCAACCTTGCCGTTGATCC 50624 Query 111161 GCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201 | |||||| | |||| || ||||||| ||||||||| Sbjct 50623 TCAAAAGGTATGACCTCTCCAGCGTCTTGAATCCAAAGTAT 50583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588931311446000