Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq5787 102 6e-17 >seq5787 Length=111344 Score = 102 bits (112), Expect = 6e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || |||||||| || ||||| ||||||||||| || | || Sbjct 91179 AGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGTGTCCGG 91120 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| ||||| || || || ||||||||||||| || | |||||| Sbjct 91119 CCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCCGGTGGGATACCCTCC 91060 Query 48669 TTGTCGCTAATCTT 48682 ||||| |||||| Sbjct 91059 TTGTCTTGAATCTT 91046 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| ||||| ||| || || || ||||| || || || | || |||| || | || Sbjct 90937 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGTTG 90878 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| ||||| || |||| ||||||||| || | ||||| |||||||||||| ||||| Sbjct 90877 CTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTT 90818 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || || | | | || || | ||||||||||| || ||||| || || || Sbjct 90817 AGACTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATCGTCTTGCCAGT 90758 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | ||| || || || |||||||| Sbjct 90757 GAGAGTCTTGACGAAGATCTGCAT 90734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380909418950610