Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq445 259 6e-64 seq5787 167 3e-36 seq360 129 8e-25 seq351 95.1 2e-14 seq467 91.5 2e-13 >seq445 Length=88944 Score = 259 bits (286), Expect = 6e-64 Identities = 479/700 (68%), Gaps = 7/700 (1%) Strand=Plus/Plus Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349 ||| | | ||| || ||||||||||| || || || ||||||||||| || | | | Sbjct 3929 ATGGCACCAGCAATCGGTATCGATTTGGGTACGACCTACTCATGTGTGGGCATCTACAGA 3988 Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409 |||| || | ||||| ||| | || ||||| || ||||| ||||| || |||| ||| Sbjct 3989 GATGACCGCATTGAGATCATCGCCAACGACCAGGGTAACCGCACAACACCCTCGTTCGTC 4048 Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469 ||||| || || | || |||||| | || ||| ||||||| || || || |||||| Sbjct 4049 GCCTTCACCGACACCGAGCGTCTCATCGGTGATTCCGCAAAGAACCAAGTCGCCATGAAC 4108 Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529 || |||| || ||||| ||||| ||||| || || || || ||||| ||| | Sbjct 4109 CCCGTCAACACAGTCTTCGACGCCAAGCGCCTGATCGGCCGGAAGTTCGACGATGCTGAG 4168 Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTC--CCGGTGTGGCTGATAAGC 195587 || || | ||| || ||| ||| | | | ||| | || | | ||||| |||| Sbjct 4169 GTGCAGGCCGACATGAAGCACTTTCCCT-TCAAGGTCATCAACAAGGGTGGC----AAGC 4223 Query 195588 CTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGT 195647 | | | | || || || | || ||| |||| || || | || || || || || | Sbjct 4224 CGGTCGTGCAGGTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCAT 4283 Query 195648 CTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAG 195707 | ||||| | | |||||| ||||||||||| | | | | ||| || || || Sbjct 4284 CAATGGTCCTCACCAAGATGCGTGAGACTGCGGAGGCATACCTTGGTGGCACAGTCAACA 4343 Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 | || || || ||||| || || ||||||| || || || || || || || ||||||| Sbjct 4344 ACGCTGTCGTCACTGTCCCAGCATACTTCAACGACTCTCAGCGCCAAGCAACCAAGGACG 4403 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAA 195827 ||| | || || || || ||| ||| | || |||||||| || || || || || | Sbjct 4404 CTGGTCTCATCGCCGGCCTGAACGTTCTGCGCATCATCAATGAGCCTACCGCCGCGGCCA 4463 Query 195828 TTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCG 195887 |||| || ||||| |||||||| | || | || || || | ||||| || | | Sbjct 4464 TTGCCTACGGTCTCGACAAGAAGACTGAGGGCGAGCGCAACGTGCTCATCTTCGACTTGG 4523 Query 195888 GTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGG 195947 | ||||| || || |||||||| ||||| | ||||| | || || ||||| || ||| Sbjct 4524 GCGGTGGCACCTTCGATGTCTCTCTTCTTACCATTGAGGAGGGCATCTTCGAGGTCAAGT 4583 Query 195948 CTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 | ||||| || || |||||| | |||||||| || ||||| Sbjct 4584 CCACTGCCGGAGACACTCATTTGGGTGGTGAGGACTTCGA 4623 >seq5787 Length=111344 Score = 167 bits (184), Expect = 3e-36 Identities = 155/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || || || || || || |||||||| ||||| || |||| Sbjct 90957 GTGGTATGCAAATCTTCGTCAAGACACTCACCGGCAAGACTATCACACTCGAAGTGGAGT 91016 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | |||||||||||||| ||| | || | ||||||||||| ||||| || || ||||| | Sbjct 91017 CATCAGACACAATCGACAACGTGAAGTCGAAGATTCAAGACAAGGAGGGTATCCCACCGG 91076 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| || || || || || || || || |||||||| || || || || || |||||| Sbjct 91077 ATCAACAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCTGATT 91136 Query 172037 ACAACGTTCAAAAGGAG 172053 ||||| |||| |||||| Sbjct 91137 ACAACATTCAGAAGGAG 91153 Score = 156 bits (172), Expect = 6e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 |||||||| || |||||||| ||||||||||| || || || ||||| || | || | Sbjct 90530 ACTGGAAAGACAATCACCCTTGAGGTTGAGTCCTCGGATACCATCGACAATGTGAAGAGC 90589 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| ||||| ||||| |||||||| || || ||||| || || || || || || || Sbjct 90590 AAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAGCAGCGTCTCATCTTCGCGGGAAAG 90649 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||| ||||| || |||||| || |||||| |||| |||||||| ||||| ||| Sbjct 90650 CAGCTTGAGGATGGGCGCACCCTCAGCGACTACAACATTCAGAAGGAGTCCACTCTCCAC 90709 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 | || || | || || |||||| Sbjct 90710 TTGGTGCTGCGCCTCCGTGGTGGT 90733 >seq360 Length=110533 Score = 129 bits (142), Expect = 8e-25 Identities = 137/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930 || ||||| ||||| || || || ||||||||||||||||| |||||||| ||||| ||| Sbjct 36923 TTCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCCGACACCATC 36864 Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990 || ||| |||| ||||||||| |||||||| || || ||||| || || || ||| | Sbjct 36863 GACAACGTCAAGAGCAAGATTCAGGATAAGGAGGGAATCCCACCGGACCAACAGCGATTG 36804 Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAG 172050 || || || || || || || || ||||| || || | || |||||| | || ||| Sbjct 36803 ATCTTCGCCGGAAAGCAACTCGAGGATGGCCGAACTTTGAGCGACTACAACATCCAGAAG 36744 Query 172051 G 172051 | Sbjct 36743 G 36743 >seq351 Length=85052 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 171954 AGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGA 172013 ||| ||||||||||||||||| || || || || || || || || || || ||||| || Sbjct 50307 AGACAAGGAAGGCATTCCACCGGACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 50366 Query 172014 AGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || || || |||||| | || |||||| | || |||||||| || || ||| | ||||| Sbjct 50367 GGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTTCT 50426 Query 172074 AAGGCTTCGGGGTGG 172088 | || || ||||| Sbjct 50427 CCGTCTCCGTGGTGG 50441 Score = 89.7 bits (98), Expect = 7e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || |||||||||||||| || ||||| Sbjct 50144 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAATCGTCC 50203 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAG 171960 ||||| ||||| || |||| ||||||| || | |||| Sbjct 50204 GACACCATCGACAATGTCAAGTCCAAGATCCAGGGTAAG 50242 >seq467 Length=92620 Score = 91.5 bits (100), Expect = 2e-13 Identities = 220/331 (66%), Gaps = 13/331 (4%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||| || || || | | | || | | || | | ||||| || ||| Sbjct 30373 AAGATGAAGGAGGTCGCCGAGTCCTACCTCGGAGAGAAGGTCACCAACGCAGTCGTCACT 30314 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || | || || || || ||||| || | || || || Sbjct 30313 GTCCCAGCCTACTTCAACGACGCTCAGCGTGCCGCCACCAAGGATGCCGGCGCGATCGCT 30254 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| ||| | | | || || || || || || || | || || || || Sbjct 30253 GGTCTCAACGTTCTCCGCGTGGTTAACGAGCCCACCGCCGCCGCTTTGGCCTACGGCCTC 30194 Query 195842 GACAAGA---ACAAGGA-CGA-AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896 ||||||| ||||||| || |||| | | ||| |||||||||||||||| Sbjct 30193 GACAAGACCGACAAGGAACGCCAGATCA--------TCGTCTACGATCTCGGTGGTGGTA 30142 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 | || |||||||| | | | |||| ||| | ||||| || || |||| || | Sbjct 30141 CTTTCGATGTCTCCGTCTTGACCGTTGACCAGGGTGTGTTCGAGGTTCAGTCTACCGCCG 30082 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| || ||||| |||||||| |||||||| Sbjct 30081 GTGACACCCATCTCGGTGGTGAGGATTTCGA 30051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657812484690400