Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4132 105 2e-17 seq364 96.9 1e-14 seq339 96.9 1e-14 >seq4132 Length=130717 Score = 105 bits (116), Expect = 2e-17 Identities = 115/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 |||||||| |||||||| |||||| || || || |||||||||||||||||| | || Sbjct 25496 TGGGCGATTGTCATACGGGAGGGAATGGCGTGAGGGTTGATGATGATGTCGGGTGTGAGA 25437 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957 ||||| || | ||| ||||| | ||| | | || || | || || || |||||||| Sbjct 25436 CCATCGGCGGAGAAAGGCATGT-CTTCTTGGCGGTAGGTGATGCCGATGGTACCCTTTTG 25378 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||||||| ||| || || ||||| Sbjct 25377 TCCGTGACGAGAAGCGAATTTGTCGCCAAT 25348 >seq364 Length=76260 Score = 96.9 bits (106), Expect = 1e-14 Identities = 175/256 (68%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 302563 ATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTT 302622 ||||| || ||||||| ||||| | ||||||||||||||| ||||| | || Sbjct 20206 ATCATGATCTCTTCCAGCGCCTTGACAAGACGACGCTGAATATATCCAGTCTCGGCAGTC 20147 Query 302623 TTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCC 302682 || ||||| |||||||| ||||| | ||||||||||| || || ||||| | ||| | Sbjct 20146 TTGACAGCGGTATCAATCAGACCTTCTCGACCACCCATGGCGTGAAAGAAGAACTCCTGG 20087 Query 302683 GGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCG 302742 || || || | || | | ||| |||| || || || || | | ||||| | ||| Sbjct 20086 GGAGTGAGACCACGAAGATAAGAGTTCTCGACAAATCCTCGTGATGCCGGCGAGTAATCG 20027 Query 302743 AACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCA 302802 ||||| || || ||||| | || || ||||| | || | ||||| || || Sbjct 20026 TCCTTGGGGAAATGGGGCAGCACACGGTACTTGAAGCCGAACGGCAATCGCTTGCCCTCG 19967 Query 302803 ACGTTCTGCTGTCCCA 302818 | ||||||||||| Sbjct 19966 AGAGACTGCTGTCCCA 19951 >seq339 Length=67822 Score = 96.9 bits (106), Expect = 1e-14 Identities = 471/746 (63%), Gaps = 5/746 (1%) Strand=Plus/Minus Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688 |||| || | |||||| ||| || || || || |||||| || || |||||||||| Sbjct 51457 TGTACTCGATAATCTCGGTGCAGAGATTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGT 51398 Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748 | || ||||| ||| |||||||| || ||||||||||| || ||||| | || | Sbjct 51397 TGCTCTTGCTGTTGGCAGCGTCCTTGTAGAGGATGTATGGGGTACCGGTCTCGGTTTGAG 51338 Query 155749 CGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCG 155808 | || || || |||||| | | || | || |||| || Sbjct 51337 CCTCGAGGATGGCATACCAGAGCTTCTGAGCGCGGACGGTCTCACGACCCTTGCCCTCAC 51278 Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868 ||| ||| | |||||| | | || | ||||| |||| ||| || |||| Sbjct 51277 GCTCGTATCGCTCGTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGC 51218 Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACAT 155928 ||| | ||||| | || | ||| | |||| ||||||| ||| || | || Sbjct 51217 ACTCGTGAGGGCACATCAAAGTCCAGGTGGTATTTTGCTCAACACGCTTCATGAAGAGAT 51158 Query 155929 CACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCT 155988 | |||| | | | ||||| || || | || |||||| | ||||| |||| Sbjct 51157 CTGGGACCCACAGACCGTAGAACAGATCGCGAGCACGAACCTCCTCCTTTCCGTGGTTCT 51098 Query 155989 TCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAAC 156048 | || || || ||||| | ||| | || |||||| | ||||| |||||| Sbjct 51097 TGCGGAGATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCAAAAG 51038 Query 156049 TACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105 |||| | |||| || ||||| || || || ||||| || || || || |||| | Sbjct 51037 CACCAGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCA 50978 Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC 156165 |||| || | | ||| ||||| || || ||||| |||| || | | || | || || Sbjct 50977 GCATGGGTACGAGACCGTTGGATGTTCCGTTGGTGCCGCTGATGTATGCTCCGGTTGCGC 50918 Query 156166 GAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCT 156225 ||| | || | | || ||||| || || | || || || ||||| || Sbjct 50917 GAATTCTGTGGACGTTGAGCCCAATGCCTCCGGCGTTCTTGGAGATCATGGCGCAGGTCT 50858 Query 156226 TTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAAC 156285 ||| || | | | || || ||||| ||||||| ||| | || |||| || Sbjct 50857 TTAATGTGTCGTAGATCCCATCAATGCTGTCATCTTTCATGTCGATGAGGAAGCAGGATG 50798 Query 156286 TTAATTGAG-GTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATAC 156344 | ||||| || | |||||||||||| |||| || ||||| | ||||| | || ||| Sbjct 50797 CCAGTTGAGCGTTG-GGTGTTCCAGCGCTGAACAGCGTAGGCGACGCATGTGTGAAGTAC 50739 Query 156345 TTATTAGACATATAATCGTATGTCTC 156370 || || ||||| || | ||| ||||| Sbjct 50738 TTGTTCGACATGTAGTTGTAGGTCTC 50713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471703133985590